KEGG   Pantherophis guttatus (corn snake): 117667777
Entry
117667777         CDS       T07329                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pgut  Pantherophis guttatus (corn snake)
Pathway
pgut03030  DNA replication
pgut03410  Base excision repair
pgut03420  Nucleotide excision repair
pgut03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pgut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117667777 (RFC2)
   03410 Base excision repair
    117667777 (RFC2)
   03420 Nucleotide excision repair
    117667777 (RFC2)
   03430 Mismatch repair
    117667777 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgut03032]
    117667777 (RFC2)
   03036 Chromosome and associated proteins [BR:pgut03036]
    117667777 (RFC2)
   03400 DNA repair and recombination proteins [BR:pgut03400]
    117667777 (RFC2)
DNA replication proteins [BR:pgut03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117667777 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    117667777 (RFC2)
Chromosome and associated proteins [BR:pgut03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117667777 (RFC2)
DNA repair and recombination proteins [BR:pgut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117667777 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    117667777 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 AAA_24 AAA_11 Mg_chelatase Rad17 RuvB_N AAA_assoc_2 AAA_19 MipZ AAA_18 nSTAND3 DNAX_ATPase_lid AAA_5 AAA_28 AAA_30 AAA_25 ABC_tran AAA_23 MeaB RNA_helicase NTPase_1 SLFN-g3_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 117667777
NCBI-ProteinID: XP_060549161
LinkDB
Position
Unknown
AA seq 355 aa
MAAPETGKSLEGGKAGGSAADVASTSTSPAGSGHYELPWVEKYRPMKMSEIVGNEDTVSR
LEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGSALKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYTKLTDAQILMRLMKIIAKENLQYTDDGLEAIIFTAQGDMRQALNNLQST
HSGFGFINSENVFKVCDEPHPLLVKEMIGHCVNANIDEAYKILAHLWKLGYSPEDIIGNI
FRVCKTFQMAEYLKLEFIKEIGYTHMKIVEGVNSLLQMAGLLARLCQKTAAPTTS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcggcacccgagacggggaagtcgcttgaaggagggaaagcaggcgggagcgctgct
gatgtcgcatctacttctacttctcctgccgggagcggccattatgaactgccctgggtt
gaaaaatacaggccaatgaagatgtcggaaattgttggcaatgaagacactgttagcaga
ttagaggtgtttgcaagagaaggaaatgttccaaatattattattgctggcccacctgga
actggaaaaaccaccagcattctttgtctggctcgtgcacttctgggctctgcattgaaa
gatgccgttttggagctcaacgcatcaaatgacagaggcattgatgtggtcaggaacaaa
atcaagatgttcgcgcaacaaaaagtcacacttccaaaaggccggcataaaataattatc
ttggatgaagcagacagcatgacagatggagcccagcaagccttgagacgcactatggaa
atttattctaaaacgactcgttttgctctggcttgcaatgcctctgacaaaatcatagaa
cccatccagtctcgctgtgcagttctgcgatacaccaagctgacagatgcccagattctt
atgaggctaatgaaaatcattgcgaaggagaacttacaatatacagatgatggtctagaa
gccattatcttcacagcccagggagacatgagacaggcactaaacaacttgcaatctacc
cattccggatttggtttcatcaatagtgagaatgtatttaaggtgtgtgatgagccccat
cctttgctggtgaaggagatgatcggccattgtgtcaatgcgaacattgatgaagcttat
aagattcttgctcacttatggaagcttggttactcacctgaagacatcatcggcaatatt
ttccgagtctgtaaaacattccaaatggcagaatatctgaagttggagttcattaaggaa
atcggttatacgcacatgaagatagtagaaggagtaaattcgctactacaaatggcaggc
ttactagcccgcctctgtcagaagactgctgctcccaccacaagctga

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