Pantherophis guttatus (corn snake): 117667938
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Entry
117667938 CDS
T07329
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117667938 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgut01007
]
117667938 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgut03016
]
117667938 (VARS1)
Enzymes [BR:
pgut01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
117667938 (VARS1)
Amino acid related enzymes [BR:
pgut01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117667938 (VARS1)
Transfer RNA biogenesis [BR:
pgut03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117667938 (VARS1)
Prokaryotic type
117667938 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
GST_C_2
Val_tRNA-synt_C
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
117667938
NCBI-ProteinID:
XP_060546833
UniProt:
A0ABM3ZEN0
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MPTLYICPHPDNFQNTRVLVAARYGRQDVTVVELPPNAEFKHRFFSLPKLPALETRVGVY
VSGPTAVSYLLSPDVMRGHNPETRALVRQWISYADMEIAPAACSVAFSALKISKQNKQGL
DRAVAELQHLLGVLDNHLKVRTYLVGEAITLADVTAACCLLLPYKYVLNQTLRVYFINLT
RWFLTCINQPEFQAVLGPVRLFEEASGGGVLEMDFKISSEAELLEKKEIEEPPPKSASQL
KKEAKKKEKMEKFLQKKEKNLQQQGEKKPKAEKKEKKDLEVITYDIPTKPGEKKDVTGPM
PDSYSPQYVEAAWYSWWESQGFFKPEYGRRSVSEPNPKGIFMMCIPPPNVTGSLHLGHAL
TNSIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWKEQGKTRHDLGREPFIKEV
WRWKNEKGDRIYHQLKKLGSSMDWDRACFTMDPKLSYAVQEAFIQLHEKGIIYRSKRLVN
WSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKIEDSDEEVVVATTRI
ETMLGDTAVAVHPKDPRYQHLHGRKVQHPFTGRLLPIVCDDFVDTEFGTGAVKITPAHDQ
NDYEVGLRHGLEFINIMNENGYLINVPPPFLGMKRFEARRAVLEALKEKKLFKEVKDNPM
VVPVCSRSKDVVEPLLKPQWYVRCDTMAQAAAEAVRRGDLRIVPDFHLKTWFTWMDNIRD
WCISRQLWWGHRIPAYFVTIDDPSVPAGEDVDSKYWVSGRSKEEAKEKAAKVFNISPDKI
SLQQDEDVLDTWFSSGLFPFSIFGWPNSGEDLQVFYPGTLLETGHDILFFWVARMVMLGL
TLTGKLPFKEVYLHAVIRDAHGRKMSKSLGNVIDPLDVITGITLEGLHAQLSDSNLDALE
LERARKGQKSDYPSGIPECGTDALRFALCAYTTQGRDINLDVNRILGYRYFCNKLWNATR
FAIRGLGEGFQPPPSPELNGSESLIDLWILSRLSHAVELCDVGFQAYDFSGITTAVYNFW
LYELCDVYLECLKPVFGGSDQAAIQTAQNVLYTCLDAGLRLLSPFMPFVTEELFQRLPRR
SPSSDPPSICVTPYPTTEQFHWRDEELDRTFDFILNIIKAVRFLRADYNLTKTKADCYLQ
CLDLQTTETVTRCSEYICILSSSKQVLVLEPGKVPPPGCAVAIASDKCIVHLLLKGLIDA
EKEITKLTGKKAELQKQILLLRQRMGSQDYALKVPAKVQELDAAKLKQSETELQKADEAV
QNFKKMI
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccctctacatctgcccccatccggataatttccagaacacccgtgtgttggtt
gcagcccgttacggccggcaggatgttacggtggtggaactgcctcccaatgccgaattc
aagcaccgttttttctctctgcccaaactcccagctctggaaaccagagtgggtgtctat
gtatctggtcctacagctgtgtcttacctgctgtctccagatgttatgagagggcacaat
cccgaaacaagagctttggtgcggcaatggatcagctacgcggacatggaaatagctccc
gccgcctgttctgtggctttctctgcgctgaagatttccaagcagaataaacaggggctg
gatcgtgctgtagccgaactgcagcatctccttggggtgctggacaaccacctgaaagtt
cgaacatacctggtgggggaagccataactctggccgatgtgaccgctgcttgttgtctt
ttgttgccgtataaatatgtcctcaaccaaacccttcgcgtttattttatcaaccttact
cgatggttcctgacatgtatcaaccaaccagagttccaggctgttttgggcccagtgagg
ttgtttgaagaggcctcaggaggaggtgttctagaaatggactttaaaatttcctctgaa
gctgagttgctggagaagaaggagatagaagaaccccctcccaaaagtgcgtcgcagctg
aagaaagaggccaaaaagaaagaaaaaatggagaagtttcttcagaagaaggagaagaat
ctgcagcaacagggagagaagaagccaaaagctgagaagaaagaaaagaaggatcttgag
gtcatcacctatgatatccccaccaaaccaggagagaaaaaagatgtgacgggtccaatg
cctgactcttacagcccacagtatgtcgaagcagcttggtactcatggtgggagagccag
ggtttctttaaaccagagtatggccgccgcagcgtctctgagccaaatcccaaaggcatc
tttatgatgtgtattcctccacccaatgttaccggatcgctccatctcggccatgccctc
accaactccatccaggactctctgacaagatggcacagaatgaggggagagaccactttg
tggaaccctggctgcgatcacgcgggcattgccacccaggtggtggtggagaaaaagctt
tggaaggagcaagggaaaacacggcatgacctcggccgcgaaccattcatcaaggaagtc
tggagatggaaaaacgaaaaaggggatcggatctaccatcagctgaagaaactgggttcc
tccatggactgggacagagcttgtttcactatggatcctaaactctcctatgctgtccaa
gaagcttttatccagttgcatgagaaagggatcatctaccgaagcaagcgccttgtcaat
tggtcctgcactctcaactcggccatttctgacatagaggtggataagaaggaattaaca
ggccggacgctcttgcctgtcccaggctacaaagagaaggttgagtttggggtactggtc
tccttcgcttacaagattgaggactcggatgaggaagtggtggtggctacaacccgtatt
gagacgatgctgggagacacagcagttgcagtccatcccaaggacccccgataccagcat
ctgcatggccggaaagtccagcatcccttcacgggacgtctcctacccattgtctgtgat
gattttgtagatacggagtttggaactggtgccgtaaagatcacaccagctcatgatcag
aatgactatgaggttggcctgcgtcatggacttgagttcatcaacattatgaacgagaac
ggctacctcatcaacgttcctccgcccttcttgggcatgaagcgctttgaagcccgtcga
gcagtgctggaagctttgaaggaaaagaagctcttcaaggaggtgaaggacaaccccatg
gtagtaccagtgtgcagccgctccaaagacgtagtggaacccctgctgaagccccagtgg
tacgtgcgctgcgacacaatggcccaggctgcggctgaggccgtgcgccgaggtgatctg
cgcattgtgccagatttccacctcaaaacctggttcacttggatggataatatcagggat
tggtgtatttctcgacaactctggtggggccaccgtattccagcatattttgtgactatt
gatgacccttctgtgccagcgggagaggatgtggacagcaaatattgggtgagcggtcga
agcaaggaagaagcaaaagaaaaggcagccaaagtcttcaacatcagtccggataaaatc
tccctccagcaagatgaggacgtcctggacacgtggttctcctctggcctgttccctttc
tccatctttgggtggcccaattcaggtgaagatcttcaggttttttaccctggaactctt
ctggagaccggacatgacattctgttcttttgggtggcccgtatggttatgttgggtctc
acacttacaggaaaactacccttcaaagaggtttacctccatgctgtcattcgggatgcc
cacggcaggaagatgagcaaatcactgggaaatgtcatagatcccttggatgtgatcacc
ggcattactctggagggtctacatgctcagttatcagacagcaatttggacgcacttgag
ctggaacgagccagaaaggggcagaaatcggattaccccagcgggatcccagaatgcggg
acggatgcccttcggtttgctctctgtgcttacacaactcaaggccgtgatataaacctg
gatgtgaaccggattctgggctaccggtatttctgcaacaagctctggaacgccaccaga
tttgccatccgtggtcttggggagggattccaaccacctcccagcccagagctcaatggc
tccgagagcctcatagacctctggatcttgagtcgcctgagccacgctgtggagttatgc
gacgtgggatttcaggcctatgacttctctggcatcaccaccgcggtgtacaatttctgg
ctgtatgagctgtgtgacgtctaccttgagtgcctaaagcctgtgtttggcggatcagac
caggccgcaattcagacagcccagaatgttctttatacctgcttggatgctggtcttcgt
ctcctcagtcctttcatgccttttgtcactgaggaactgttccagcggctgccccgacgg
tctccttcctctgaccctcccagcatctgtgtcaccccttaccctactactgagcagttc
cattggagagatgaggaactggaccgcacttttgacttcatattgaacatcatcaaggct
gtgcgttttctccgggcggactacaaccttaccaaaaccaaagctgactgttacctacag
tgcttggatcttcagacaacagaaactgtgactcgttgctccgaatatatctgcattctt
tcctcctccaagcaagtcttggtactagagcctggaaaggttcctcctcctggctgcgct
gtagcaatagcctccgacaaatgcattgtccatcttctgctgaagggcttaattgatgcg
gagaaggaaataacgaagctgacagggaaaaaggcggagctgcagaaacaaatcctactg
ttacgccagcgtatggggagtcaagattatgctctgaaggtaccagccaaagtccaagaa
ttggatgcagctaagctgaaacaaagtgagacagaactgcagaaggcagatgaagctgtt
cagaatttcaagaagatgatctga
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integrated database retrieval system
