Pantherophis guttatus (corn snake): 117667939
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Entry
117667939 CDS
T07329
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
pgut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117667939 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
117667939 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117667939 (LSM2)
03041 Spliceosome [BR:
pgut03041
]
117667939 (LSM2)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117667939 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
117667939 (LSM2)
Spliceosome [BR:
pgut03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117667939 (LSM2)
Complex C
U2 snRNP components
117667939 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
117667939
NCBI-ProteinID:
XP_034277449
UniProt:
A0A6P9C4H7
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctattccttcttcaaatccctagtagggaaggacgtagtagtggaattgaag
aatgacttgagcatctgtgggaccttacattctgtagatcagtacctgaatattaagctc
acggacattagtgtgacagatccagaaaaatatcctcatatgttgtcggtcaagaattgc
ttcattcgtggttctgttgtccgttacgtccagcttccggccgatgaggtggacacccaa
ctcttacaagatgcggctcgcaaggaagccctccagcaaaagcagtga
DBGET
integrated database retrieval system
