Pantherophis guttatus (corn snake): 117668259
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Entry
117668259 CDS
T07329
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03022
Basal transcription factors
pgut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117668259 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
117668259 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117668259 (ERCC3)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117668259 (ERCC3)
Enzymes [BR:
pgut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117668259 (ERCC3)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117668259 (ERCC3)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117668259 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
117668259
NCBI-ProteinID:
XP_034277915
UniProt:
A0A6P9CDN2
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MGKKERDKKKSKKRHHEEEEEEEYDLTGKESQEAVPSAAGKQVEDSGTKLDEYGAKDYRN
QMPLKADHSSRPLWVAPDGHVFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPE
VIQQLLQDQVIRECRLRNAEGEETELITEMFKSKSAISKSGENSGPSTSQGADGQNKPDV
PADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNP
DINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLIL
GNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAE
RVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLI
GPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRAC
QFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKINT
IFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMIAEEYNAFFYSLVS
QDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELMFSSKEEQQQLLQKVLQASDLDA
EEEVVAGEYGSKSSQISRHYGTMSSMSGADDTVYMEYQSSRSKASSNKHIHPLFKRFRK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaagagcgagataagaagaaatcgaaaaaacgccaccatgaggaagaagag
gaagaagaatatgaccttacaggcaaagagtcccaagaagcagttccgtcagctgcaggg
aagcaagtggaagattctgggaccaaacttgatgaatatggtgcaaaagactacaggaac
cagatgccactcaaagctgaccattcctcgcgcccattgtgggtggctcctgatggccat
gttttcttagaagccttttcacctgtctacaagtatgctcaggattttcttgtggctatt
gctgagccagtttgccgacctactcacgtccacgaatataaactgactgcttattccctc
tatgctgctgttagtgtgggtttgcaaaccagcgatatcactgaatatctacaaaagctg
agtaagactggtgtgcccgatgggatcattcagttcattaagctatgtactgttagttat
ggaaaggtgaagctggtcctgaagcataacaggtattttgtagaaagcacccaccctgaa
gtcattcagcaacttcttcaggaccaagttattagggaatgtcgcctgagaaatgcagag
ggggaagaaactgaactcataacagaaatgttcaagagcaaatctgcaatttcaaagtct
ggtgaaaatagcgggccatcgacttctcaaggggcagatggtcagaataaaccagatgtt
cctgctgacttatttgaattttatgaacaaatggataaagatgaagaagaggaagaggaa
actcaaactgtttcttttgaagtgaagcaggaaatgattgaagagcttcagaagcgttgc
attcatctggagtaccctctgcttgctgaatatgatttcagaaatgattctgtgaatcca
gatattaacatagatttgaaacccacagctgttctccgaccataccaggagaagagtttg
agaaaaatgtttgggaatggtcgtgctagatctggggttatcgtcttgccttgtggtgct
ggcaagtcgcttgtaggcgtaacagctgcttgcaccgtccgtaagcggtgcctaatattg
ggcaattctgctgtctcagtggagcaatggaaagcccagttcaagatgtggtctaccatt
gacgatagccaaatctgccgatttacttctgatgccaaagacaagccaattggctgttct
atagctatcagcacgtactccatgttgggacacacaacaaagaggtcatgggaggcagag
agagtgatggaatggttgaagagccaagaatggggtctgatgatccttgatgaagtgcat
accatacctgcaaaaatgttcaggcgtgtgctcactattgttcaggcccattgcaagctt
ggattaacagctactcttgtccgagaagatgacaaaattgtagacctgaatttcctgatt
gggcctaaactctatgaagccaattggatggaattgcaaaacagtggttatattgctaaa
gtccagtgtgctgaggtttggtgtccaatgtctcctgaattctacagagaatatgtagct
attaaaacaaagaagcggatattgctctataccatgaacccaaacaaatttagggcttgc
cagttcctgattaaattccatgaacgaaggaatgataagatcatagtctttgctgacaat
gtgtttgctttgaaggagtatgctgttagattgggcaaaccttatatttatgggcctaca
gcacagggggagagaatgcaaattctgcagaatttcaaacacaatcccaaaatcaatacc
atctttatctccaaggttggtgatacatcttttgatctgccagaagccaatgttctcatt
cagatttcatctcatgggggctctcgaagacaggaggctcagaggctgggtcgagtctta
agagccaaaaaaggaatgattgcagaggaatacaatgcctttttttattcgttggtctct
caggacactcaagaaatggcatattctacgaaacgtcaaaggtttctagtagatcaaggc
tacagctttaaggtaattactaaacttgctggtatggaagaggaagaacttatgttttca
tccaaagaagagcagcagcagctcctccaaaaagttttacaagcttctgacctggatgct
gaggaagaggtggttgcaggagaatatggctcaaagtcatctcagatatcccgacactac
ggcacaatgagttccatgtctggagcagatgatacagtttacatggaatatcaatcctca
cgaagcaaggcatcttcaaataaacatattcacccactttttaaacgctttaggaaataa
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integrated database retrieval system
