Pantherophis guttatus (corn snake): 117669641
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Entry
117669641 CDS
T07329
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgut03037
]
117669641 (NPHP4)
Cilium and associated proteins [BR:
pgut03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117669641 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
117669641
NCBI-ProteinID:
XP_034280105
UniProt:
A0A6P9CJT6
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MGEWHKIFHQSLTLPPRNVRRPNLPLQPSVPFQCVLKSVHGNALKQKVLENMVEVAFQLR
LSLFDMAYRQFFGRTWRSPPRPLKSVPGQPPSAVFNETVYFLTSLGHPGVLMVLEMVATA
KGQDTAYREVGCGFGFLRLFNGKSEPLIWNATGKGLPLYQGTPRALLHPLLLEPIEKNKY
LTVMENTHLQCTLQLHPPLEAIYHLLPENTPVSSGQKVPGVLAAPEGDFLQKPRLMKSQT
WYLDKLTVHLYPSLEKFEEELLSLLMHEQVNSILDGTSLAIQERRLHVGVHNGLCFVQTP
QVVVVVPVALPEASRARGSSGNLRRKQGSPLKGSAEGQALILRSRIHLAEMVPHPAFGVL
FLLEYVFSVASGPDGKTPSMTSLTAAAYMHSVRWALWQPVLDANSADVVLPLRGGPQLNP
HHVLVYKTPPATMSSEEVKQVESGTLAFHFSTSSEDRLGTAAKSPGVKRETPLPPKIKSP
PLATPGSPPSVQMLVSTQDYTQGPGLSMSQLLASPINRSGQALLPAVSGGQPSQPAREPE
QSQAAIAHLESDLSYNPQLEDGSTVDQLQELPFTPVHMPILALGGAPSRSPNTAPTRASL
ARLRTAGFPELLDCNKEPLEMLDPNDPAPCSPQREEGDPLPDHEIHLQFLALSRPAQDDP
ATWPQSVYFTLQFYRFPPVTTPRLQLVQTQACGPTTHILAQINPDGTLNLAPPGFHLKYL
VDLASLKPGEPRWFLHYLAQQALQIDVWDGDSLLLLGSAAVKLKHLLRQGRTGVQVYHEL
EVLTVEYKPDATVLSGEVFRPWGVKPIGVHAVVRGQLHLRLANIGHRCEQRLWRSHSLPP
SQRRVISSQDGARGFPGGSLVSLSTHRAGNVCQAKKLADVDSELAALLFSRLREVSGVVQ
PASQDAGLTRRRKLERMLSVRRKESQEGDVGRKSSFILGRHEDRVQHSRDLQLIEAYRER
IKAESITAMLCQAITTHHVIYATLGTAEFFEFALKNPYSVQHTVTIRIDHPELSVILDVR
EWRHFKELTQTVTPLEEDMFHLHNGLTPQVYLRPKETVYIPFKYQTFSMEQTATMQQGPP
EPTSKEGEKISMATSSGKFSETLRIKVSFTVGNGKPLAILSVSVETQPHTVDQTFRFYHP
ELTFLKKSIRLPPWHTLPGTPVGVPGGEPEMFVRCSDPNVICETKKMGPGEPQDIFLKVA
AGSSPQIQRFFVLIYTDPWLAAPTQTWQFYLHCLQWVEGSCILGQLTRLSLVLRGTHILR
KVKAFTSHPQEMKLEPEGVFILPANGVQDLHLGLRPQSAGCRFISLNLVDVEFHQLVSTW
LVSVTCRQPFISKAFEIVLPSGGGKGSNKKITYTNSYPAPRAYFLHTNHPDLLHFKEDSF
QVGGGETYTIGLRFAPSQNSGEEEILIYINDAEGKNEETFCVKVAYQ
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatggcacaagatcttccaccagagcctaaccctgcctccgcgtaacgtccgg
aggccaaatttgccgctccagccatcggtgccatttcagtgcgtcttgaagagcgtgcac
gggaatgccttgaaacaaaaagttcttgagaacatggtggaggtggccttccagctgcgc
ctttcgctcttcgacatggcctaccgccagttctttggcaggacttggagaagcccccca
aggcctctgaaatccgtcccggggcagccgccctccgcggtcttcaacgagacggtgtat
ttcctcacgtctttgggtcaccccggggtcttgatggtgctagagatggtggcaaccgcc
aagggacaagacacggcctaccgggaagtcggctgcgggttcgggttcctccggttgttt
aacggcaaatccgagccgctgatttggaacgcgacgggcaaagggctccctttgtatcag
gggactccccgcgccctcctgcacccgctgctcctggagcccatagagaagaacaagtac
ctgacagtgatggaaaacactcacctgcaatgcaccctccagctccacccacccctggag
gccatttaccatctcctgcctgagaatacccccgtatccagcgggcagaaggttccaggt
gtcttagcagcacctgaaggagactttttgcagaagccccgcctgatgaagagccagacg
tggtacctggacaagctgaccgtccacctctacccttccctggagaagtttgaggaggag
ctcctgagcttgcttatgcacgagcaggttaactcgatcctggacgggacctccctcgcg
atccaggaacgccggctacacgttggcgtccacaacggattgtgtttcgttcagaccccc
caggtggtggtggtggtccctgtggcattgccagaggccagtagagcccggggaagcagc
ggcaacctgcgccggaaacaaggaagtcccctcaaaggcagtgctgagggacaagctctc
atcctgcgaagccgtatccatctggccgagatggtgcctcaccctgcttttggagtgctc
ttcctgttggaatatgtcttctctgttgcaagtggccctgatgggaagacaccctccatg
acctccctgacggccgcagcctacatgcactcagtccgctgggccctttggcagccggtt
ctggatgcgaattccgcggacgtggtccttcccttgcgaggcgggccccagctgaatccc
caccatgtcctggtttacaagactcctccggctaccatgagctccgaagaggtgaagcaa
gtcgaatcaggcaccctcgcctttcacttctccaccagctccgaggaccgactcggaaca
gcggccaaaagtccgggcgttaagagagaaacaccgctgccccccaagatcaagagccca
cccctcgcgacccccggttcacctccttccgtccagatgttggtttctactcaggattac
actcagggtcccgggctgtcgatgtcgcaactgttggcatccccgataaacaggagtggc
caggcattgctgccggcggtcagcggtggtcagccgtcccagccggccagagagccggag
cagagccaagcagccatcgctcatctggaatccgacctgagttacaaccctcaactcgag
gatggctccaccgtggaccagctgcaagagctgcccttcacgccagtccacatgcccatc
ctggccctcggaggagccccttcgcggagccccaacaccgcccccacccgggcctcactc
gcccgcctgcgcacggccggattccccgagcttctggattgcaacaaggaaccactggag
atgttggatcccaacgatcccgcgccctgcagcccccagcgggaggaaggcgatcccttg
cccgaccacgagatccacctgcagttcctggccttgagcaggcctgcccaggacgaccct
gctacgtggccccagagcgtctacttcacccttcagttttaccgcttccctccggtgacc
acgccacggctgcagctggtccagactcaggcctgtgggccgacgacccacatcttggcg
cagatcaacccagacgggaccctgaatctcgcgccccctggtttccacctgaagtacctg
gtggacctggcctcccttaaaccaggtgagccgcgctggttcctccactacctggcccag
caggccctgcagatcgacgtctgggacggggactctttgcttctgctgggatctgccgcg
gtgaagctgaagcatctcctccgccaaggacggacgggggtccaggtctaccacgagttg
gaggtcctgaccgtggagtacaaaccggatgcaaccgtgctgagcggggaggtcttccgc
ccttggggggtcaagcccatcggggtccacgcggtcgtgaggggtcagcttcacctccgc
ctggcgaacatcggccaccggtgtgaacagaggctatggaggtcacactccttacctcct
tctcagaggcgggtcatctcctcgcaggacggcgccaggggcttccctggtggcagtttg
gtctccctcagcactcacagggccggaaatgtgtgccaagccaaaaaattggccgacgtg
gacagcgagctggccgctctccttttctcccgcttgcgggaagtgagtggtgtcgtgcaa
cctgccagccaggacgccggactcacccgacgccggaaattagagaggatgctttcggtc
cggaggaaggagtcccaggagggcgacgttgggaggaaaagcagcttcatcttgggccgg
cacgaggatcgggttcagcactcccgagacctccagctgatcgaggcgtaccgggagcgc
atcaaagccgagagcatcaccgccatgctctgccaagccatcaccacccaccacgtcatc
tacgccacgttgggcacggccgagttctttgagtttgccctgaaaaacccctacagcgtc
cagcacacggtgaccatcagaatagaccatccggagctcagcgtcatcttggacgtcaga
gagtggagacattttaaagaactgacccaaactgtcacaccgttggaagaggacatgttt
catcttcataatggcctcactcctcaggtctacctccgtcccaaggagaccgtctacatc
cccttcaagtaccagaccttctccatggagcagacggccaccatgcagcaaggtccccct
gagccgacgtctaaggaaggtgagaagatctccatggccacctcttccggaaagttcagc
gagactctacgcataaaggtctccttcacggtgggcaacggcaagcccctcgctatcctg
agcgtcagcgtggaaactcagccccacacggtggatcagaccttccgcttctaccacccg
gagctgaccttcttgaagaaatccatccgcctgcctccatggcacacgctcccagggact
cctgtaggcgttcccggtggagaacctgagatgtttgtccgctgcagtgaccccaacgtc
atctgtgagaccaagaagatgggacctggggaacctcaggacatctttctgaaggtcgct
gcgggttcgagtccccagatccagagattcttcgtgttgatttacacagacccctggctg
gctgcgcccacccagacctggcagttctacctccactgcctgcagtgggtcgagggcagc
tgcatcctggggcagttgacgcggctctccctggtgctccgggggacccacatcctccgt
aaggtcaaggccttcacctcccacccgcaagagatgaagctggaaccggagggggtcttc
atcctgccggccaacggggtccaagacctgcacctcggattgcggccgcagagcgctggc
tgccgcttcatctccctcaacctggtggacgtggagttccatcagctggtctccacctgg
ctggtgtccgtgacctgccggcagcccttcatctccaaggcgttcgaaatcgtgctgcct
tccgggggaggaaaagggtcgaacaagaagatcacctacaccaactcctacccagccccc
cgggcctatttcctgcacaccaaccacccggatctcctgcactttaaggaggactccttc
caggtgggcggtggggagacctacacaatcggtttgcggtttgcccccagccaaaactcc
ggcgaggaggaaatcctgatttatatcaacgacgccgaagggaagaacgaagagacgttc
tgcgtgaaggtggcctaccagtga
DBGET
integrated database retrieval system