Pantherophis guttatus (corn snake): 117669784
Help
Entry
117669784 CDS
T07329
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03030
DNA replication
pgut03420
Nucleotide excision repair
pgut03430
Mismatch repair
pgut03440
Homologous recombination
pgut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117669784 (RPA1)
03420 Nucleotide excision repair
117669784 (RPA1)
03430 Mismatch repair
117669784 (RPA1)
03440 Homologous recombination
117669784 (RPA1)
03460 Fanconi anemia pathway
117669784 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgut03000
]
117669784 (RPA1)
03032 DNA replication proteins [BR:
pgut03032
]
117669784 (RPA1)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117669784 (RPA1)
Transcription factors [BR:
pgut03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117669784 (RPA1)
DNA replication proteins [BR:
pgut03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
117669784 (RPA1)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
117669784 (RPA1)
MMR (mismatch excision repair)
117669784 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
117669784 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
117669784
NCBI-ProteinID:
XP_034280380
UniProt:
A0A6P9CKJ8
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MASLPRLSGGSIAAMLLQAEPVERPVLQLITIRPISTGNGPPRYRMLMSDGVNTLSSFML
ATQLNPLVDDQSLTANAICQINRFIVNTLKDGRRVVVLMEMEVLRPGHAVPAKIGNPVPY
TEAAGQAGRQPPATGPATSPFQSKPMGLQSGALDAGSSAKYPGPSKLLGNAGSSGILSTP
GGSQVKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIEMVDESGEIRATA
FNDQVDKFFPLLELNKVYYFSKGHLKTANKQYTSVKNDYEISFSNETSVVPCEDAEHLPS
VQFDFVAIGDLESVSKDSLVDVIGVCKSYEDTQKVTIKSSNREVFKRELHLMDMSGKTVT
VTLWGVDAEKFDGSRQPVVAIRGARVSDFGGRSLSVVSSSTLLVNPDCPQSFKLRGWFDS
EGQHLESVSISSGRGGLAAGGNTNWKTLNEAKSENLGQGDKADYFSCVGTVVYLRKENCM
YQACPTQDCNKKVIDEQNGLYRCEKCDREFPNFKYRMILSVNIADFQDNQWVTCFQESAE
AILGQNTAYLGELKEKNEHTFDEVIQNANFTSHEFRIRVKLETFNDESRLKATAVEVKPI
NYKEYCQRLILNIRRNAARLG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgcccaggctgagcgggggctccatcgcggccatgctgctgcaggcggag
cccgtggagaggccggtgctgcagctgatcaccatccgccccatctccactggaaacggg
ccccctcgctaccggatgctgatgagcgacggcgtcaacaccctttcctcttttatgctg
gccacacagctgaatcctctggtggatgaccagagcttgaccgcaaatgccatttgccag
attaaccgcttcattgtgaacactctaaaagatggaaggcgagtggtggtcttgatggaa
atggaggttctgcggccgggtcatgcagtccccgccaagattggaaatccggtgccgtac
accgaagcagctgggcaagcagggaggcagccgccggccaccggcccagcaaccagccct
ttccagagcaagccaatggggctccagagtggggccctggatgcagggtcttcggcaaag
taccccggcccttccaaactgctggggaacgcagggagctccggcatcctgagcactcca
gggggctctcaggtcaaagtggtgcccatcgccagcttgaacccttaccagtccaagtgg
accatttgcgcccgggtgacccagaagggccagatccgcacctggagcaactcccggggc
gaagggaagcttttctccatagagatggtggatgagagcggtgagatccgagcgacggcc
tttaatgaccaagtggacaagtttttccctctccttgagttgaacaaggtctactacttc
tccaagggccacctgaagacggccaacaagcagtacacctccgtgaagaacgactatgag
atcagtttctccaacgagacgtccgtcgttccctgtgaggacgctgagcacctgccctct
gtgcagtttgactttgtggccattggggacctggagagtgtcagcaaggactccctcgtg
gacgtgattggggtctgcaagagctatgaggacactcaaaaggtcaccatcaagtcatcc
aaccgggaggttttcaagagggaactgcacctgatggacatgtcaggcaagaccgtgacg
gtcactctctggggtgtggacgcggagaagttcgatggctcccggcagccagtggtggcc
atccggggggcccgagtctcagactttggggggcggagtctctccgtggtttcctccagc
accctcctggtgaaccccgactgcccgcagtccttcaagctgcggggctggttcgattcg
gaagggcagcacctggagtccgtctccatctcttcggggcgaggtgggctggcggcaggg
ggcaacaccaactggaagaccctgaacgaggccaagtcggagaacctgggccaaggagac
aaggccgactacttcagctgtgtgggcacggtggtctatttgcgcaaggagaactgcatg
taccaggcctgccccacccaagactgcaacaagaaggtgattgatgagcagaacggcctc
taccgctgcgagaagtgtgaccgggagttccccaacttcaagtaccgcatgatcctgtcg
gtgaacattgcagacttccaggacaaccagtgggtgacctgcttccaggagtctgcggag
gccatcctcgggcagaacacggcttacctgggggagctgaaggagaagaatgagcacact
tttgacgaggtcatccagaacgccaactttacctcccacgaattccggatccgagtcaag
ctggagacgttcaatgatgagtcgcgcctgaaggccacggctgtagaggtgaagcccatc
aactacaaggaatactgccagaggctgatcctgaacatccgtaggaatgctgcccggctc
ggctga
DBGET
integrated database retrieval system
