Pantherophis guttatus (corn snake): 117670282
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Entry
117670282 CDS
T07329
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03008
Ribosome biogenesis in eukaryotes
pgut03013
Nucleocytoplasmic transport
pgut03015
mRNA surveillance pathway
pgut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117670282 (NXF1)
03015 mRNA surveillance pathway
117670282 (NXF1)
03008 Ribosome biogenesis in eukaryotes
117670282 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117670282 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117670282 (NXF1)
03009 Ribosome biogenesis [BR:
pgut03009
]
117670282 (NXF1)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117670282 (NXF1)
mRNA cycle factors
Stress granule specific factors
117670282 (NXF1)
Ribosome biogenesis [BR:
pgut03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117670282 (NXF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
UBA_8
RRM_NXF1-2
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
117670282
NCBI-ProteinID:
XP_034281226
UniProt:
A0A6P9CQ69
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAAAAATRCPPRVRIGRLASVPERSAEGREEEEEEEEKKGEQLKRRRRRRTRKRPGSQKR
LSSEASLGGLPNLCAGGGEPLSEVPASGAPLMADGGKGGYSEHDDRVATSNRHYARRRKG
RVPFRGKMYSETGSHQRSWNSSGSGPRGWPDDDDDDVLMSDAHEVLRTRYTPYGSRPHRP
DRGSPSLMNATVRRNLNIGDRAPPPPPPQKGTGSRKTWFRITIPYGRKYEKNWLMNAIHE
TCSVPFHPVEFHCVNNRVVFYVEDTSVANALKQTSRKILSPDGYKVAILINTCNPPMTVQ
HELKPEDIEHLKQCMSKRYDSANQALDMKNIHTDPDLIAQNCDIVLNRRNCMLAVLQIID
DNIPELLSLNLSDNKLYRLDDMSALVQKAPNLKILNLSCNQLKTEHELDKLKGLKLDELW
LDSNPLCDGFRDRSLYISAIRERFPKLLRLDGHELPPPISFDVETPTTLPPCKGSYFASE
GLKMLIVRFLQQYYAIYDSGDRQGLLDAYHEGACCSLSIPFSGNHPYSRTQGSEQTRNCL
SEYFKNSRNVKRLKDPSLRFRLLKHTKLNVVAFLSELPKTQHDVNSFVVDVCAQTNSLLC
FSLSGIFKEVDSRSRELVRAFTRVFIAVPVGHSGLSIVNDQLFIRKANNTEIRKAFVMPA
PTPSSSPVPTPSTEPMPSSSPGPTLTAEQQEMLQNFSLQSGMNLEWSQKCLMDNDWNYAK
AAHAYTQLKAQQKIPEVAFIH
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggctacgcgttgcccgccgcgcgtgcgcattgggcggctcgcctcc
gttccagagcgaagcgctgaggggagagaagaagaggaggaggaggaggagaagaaaggc
gagcagttgaagcggcggcggcggcggcggacgcggaagcggccggggagccaaaagcga
ctctcttccgaggcctctctcggcggccttccgaacttgtgtgccggagggggggagccg
ttgtctgaggtgcccgccagcggggctcccctcatggccgacggcgggaaaggcggatac
agcgaacatgacgaccgcgtggccaccagcaacaggcactatgcgcggaggagaaagggc
cgtgtccccttccgaggaaaaatgtacagcgagacgggctctcatcagcgcagttggaac
agttctgggtccggtcctcgtggttggcccgacgacgacgatgacgacgttctcatgagc
gatgctcacgaagtgctccgaacacgctacactccttacgggtcacgtccgcaccgacca
gaccgagggagtccgagccttatgaatgccaccgtgagacgaaatctgaatattggggac
cgtgctcctcctcctcctcctcctcagaaagggacaggaagcaggaagacctggttcagg
attacgattccttacggaagaaaatacgaaaagaactggctgatgaatgccatacacgaa
acctgcagcgtccccttccaccccgtggagttccactgcgtgaataatcgggttgtattc
tacgtagaagacacttctgtggccaacgcccttaagcagacctctcgtaaaattttgtct
ccggatggatacaaggtggcgatacttataaacacgtgcaatccgccgatgaccgtccag
catgaactgaaaccagaagatattgagcatctgaagcaatgtatgagcaaaaggtacgat
agcgccaatcaagctttggatatgaaaaatatccacacagatcccgatctgatagcccaa
aattgcgacattgtgttgaaccgccgaaactgcatgttagctgtgctgcagatcatcgac
gacaacatccccgagctcctctccctcaacctgagtgacaacaagctctatcgcctcgac
gacatgtccgcgctagttcaaaaagctcccaacctgaagatcctcaacttgtcttgtaac
cagctgaagaccgaacacgagctggacaagctgaaaggcttaaagctggacgaactctgg
ctggacagcaatcccctgtgcgacggctttcgggaccgctccctttatatcagcgccatc
cgagaacggttccccaagctgctgcggctggacggtcatgagctgcccccgccgatctcg
tttgacgttgaaacgccgactactctgcctccgtgcaagggcagttattttgcctccgaa
ggcttgaaaatgctgatcgttcgctttttacaacaatactacgccatctacgattctgga
gaccgacaaggcctgctggatgcctatcacgagggggcgtgctgttcgctgagcatcccg
ttctccgggaatcacccttacagcaggactcagggcagtgaacagacaaggaactgtttg
tctgaatatttcaaaaacagccggaatgtcaagcgactgaaggatccttccctgcgcttc
cgactcctcaaacacactaagctgaacgtcgtggctttcctcagcgaattacccaagact
cagcacgacgtgaattccttcgtggtggacgtctgcgcgcaaacgaattcgctgttatgt
tttagcctgagcggaatctttaaggaagtcgacagccggtctcgggagctggtgcgagcc
ttcacccgggtcttcattgccgtacctgtgggccacagcgggttgagcatcgtgaacgac
cagctcttcatccgcaaagccaacaacacggaaatccgcaaagccttcgtcatgccggcc
cccaccccatcctccagccccgtgcccaccccttccactgagcccatgccctcttcgagc
cccgggcccaccctgacggccgagcagcaggaaatgttgcagaatttctccctgcagtcg
ggcatgaacctggagtggtctcagaagtgcctcatggacaacgattggaactacgcaaaa
gcagctcatgcctacacccagctgaaggctcagcagaagatccccgaagtggcgtttatc
cactga
DBGET
integrated database retrieval system
