Pantherophis guttatus (corn snake): 117670527
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Entry
117670527 CDS
T07329
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgut03036
]
117670527 (TDRD12)
Enzymes [BR:
pgut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117670527 (TDRD12)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117670527 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Urotensin_II
Motif
Other DBs
NCBI-GeneID:
117670527
NCBI-ProteinID:
XP_034281646
UniProt:
A0A6P9CR56
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MIEVIILKIENPDCFWVYIIGGRKFVDNEMEYETLQTEMNQFYNKHYRCVDAKPCALEEG
QVCAVYCEELKSWCRAVVNSIISYTDYYIAECFLVDYAKTVPVNTKKICVVVKSFMRLPY
RATKFRLYSVKPVTLRVNYYNDNAEIVPANKWDVAAVQYFQNLLNAATQVEAKLHAVEED
NFAVYLYVTISGEKVCVNDDLVAKNFACYELGKTNQKPGSEGAKSLSEKNPVMLLWPTLL
RESKVSEMGAAPICDNPDKAEFTHFSETNLHKTKQPDIVVPVSPLKQGITFSVPTDMQTV
SNLPKTSTKIQEGENDLQENNLGVKLLQFLNPDPLKIATGQETEELKMNITTCLPVVLSN
KIDPCSSLETAPLFPALKKELLRKQFQGPNHVQSYCWPAIARGYDSLIISSESNPLSYLL
PIITFLQSRNCYISLSARHGPVALIICPGQKKAELVFELLKMYSHCSRPLHPMLLFLGMN
KEEIKSVRIPRGCEIVVTTPPSFLRLLEHHSLLFLRLCHLVFDEVDVLFSDAKEQLLAIL
QYYKFNLSVEEKEFAPQQIVAVGNHWDKNVDVLTKEFMNDPYIIITSMEEAAIYGKVQQV
VQLCLECDRISTLLQTLDFTPTDAQKTLIFTSSVEERDMVYKAVESISLFCLKMNPGIGF
QSDYIVEQWNKTISPGTHVVLVLTDDCTAAVKFTDATRVIHFSFPPTPRIFGARLHGLSA
NFQNSVEKSPSLGKEQSKAKSILLLTEKNACHAVGVLHYLKRAEAFIPPDLYNFTRGVLE
AKEEKRSRQPLCSSIKAYGTCKNKKRCPDRHRINLQTDVPSKVTDEVLQTGGIITILPLF
IVDATNYLGRVVGKWGNPYAALETELKDYYQESNNCTPVDKVKKLAVYGLREENSFHRVQ
VLDVEPKEDSGAFYNVHIKYIDEGRTGFVQNHHLLSLPEQFQTLPPQAVEFIICRVKPID
NEAEWHPKVSRYINDKIRGKPHEAKIALVLGNTIWVDPVIRVTKLQDLKTSINEYNVRSE
ILSTGLGVDNPEHIQELEKLFNEAEIPHEKKEKLALLHPPMDGRNAEPVEQNVSAPATLS
SEATDKPALPVVQKSQHSQDIVHDGYSEVPLENHCNETVQSKNDEDVPQTSPKWLHPAIK
WFDKQDAVVVKIKLQNISNYDCRIFEQRVTFSASANGKFYLADMELQRSILREKSTCVLK
GNEPTILLVKVKKEPWCNLLKEKNHHVSFDFDYLDDNEERSPFHVGSSPKKIYEIPIGVC
EEEEEEDESSKDSDSESDLSSC
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtcataatactgaagattgaaaatccagattgcttttgggtctacataata
ggaggcagaaaatttgtagacaatgaaatggaatatgaaacacttcagactgaaatgaat
caattctataacaaacattatcgatgtgtggatgccaagccctgtgcactagaagaggga
caggtttgtgctgtttactgtgaggaactgaaatcttggtgcagagctgttgttaattca
atcatatcgtatacggattattacattgcagaatgtttccttgtggattatgccaaaact
gttcctgtgaacactaaaaagatctgtgtggtcgtaaaatcatttatgaggctgccttat
agagctacaaagtttaggttgtactctgtcaaaccagttaccctacgtgtcaactattac
aatgacaatgcagagatagtgcccgctaataaatgggatgttgcagctgtccagtacttc
caaaacctcctgaatgcagccactcaagtggaggccaagttacatgctgttgaagaggat
aattttgctgtctatctttatgtcacaataagtggtgaaaaggtgtgtgtgaatgatgat
cttgttgcaaagaactttgcttgctatgaactcggtaaaacaaaccagaaaccaggttca
gaaggtgccaaatctctttcagagaagaatcctgtaatgttgctgtggccaacgttactg
cgagaatctaaggtttctgagatgggtgctgctcctatttgtgataatcctgacaaagca
gagtttacacatttctcagaaactaatttacataaaacaaaacagcctgatatagtggtg
cctgtttcacctttgaagcaaggaataactttttctgtaccaacagacatgcaaacagtc
agcaacttgcctaagacaagtaccaaaatccaggaaggggagaatgatctccaggagaac
aaccttggggtgaagcttctacagtttttaaaccctgatcctctgaaaattgccaccgga
caagaaactgaggagcttaagatgaatatcactacatgtcttcctgttgtgctgagtaat
aaaattgatccatgttcatctcttgaaaccgcaccactgtttccagctttaaaaaaggag
cttttaagaaagcaattccaaggacctaatcatgtacagtcttattgctggcctgcaata
gcacgtggatatgattcgcttattatctcttctgaaagtaacccactttcatatcttctg
ccaatcattacatttttgcagtcaagaaattgctacatatcgttatccgctagacatggt
ccagtagcattaatcatatgccctggccagaagaaagcagaactggtatttgaactcctg
aaaatgtacagccattgctccaggcctctccacccaatgttgcttttcctgggaatgaat
aaggaagaaatcaagagtgtaagaattccaagaggatgtgaaatcgtggtaacaacccca
cctagctttttgcggctgcttgagcatcatagtttactcttccttaggttgtgtcatctg
gtgtttgatgaggttgatgtattgttctctgatgccaaggagcagttacttgctattttg
caatactacaaatttaacttgagcgttgaagaaaaggagtttgcacctcagcagattgtt
gctgttggaaaccactgggacaaaaacgtagacgttttaacaaaagaattcatgaatgat
ccatatattataatcacctccatggaagaagctgccatatatgggaaagtgcaacaggtt
gtgcagctctgccttgaatgtgaccggatctctactttacttcagacattagattttacc
cctacagatgctcaaaagactctgatttttacaagttctgtggaagaaagagacatggta
tacaaggcagtagaaagcatttcactcttttgcttgaaaatgaacccgggaattggattt
caatctgattatattgtagagcagtggaacaaaaccatcagtcctggcacccatgttgta
ttagttttaacagacgactgcacggcagctgtaaaatttacagacgcaacccgtgtcatt
catttcagctttccaccaactccaagaatctttggtgcccgcctacatggcttgtctgcc
aacttccagaattcagtagaaaagagtccatcgctgggaaaagaacagagcaaagccaaa
tccatcttgctgttgacagagaaaaacgcctgccatgcagttggagtgttgcattatttg
aaacgggcagaagctttcatcccccctgacttgtacaactttaccaggggagtgttggaa
gccaaagaggaaaagagaagcaggcagccgttgtgttcttccattaaggcctatggaaca
tgcaaaaataaaaaacgctgtcccgatcgccatcgcattaaccttcaaactgatgtgccc
tcaaaagtaactgacgaagttctgcaaacaggtggaattataacaatactgcctcttttt
attgtggatgccacaaactacttaggccgtgtggtcgggaaatggggtaatccctatgca
gctcttgaaacagagctaaaggattattatcaggaatctaataattgtaccccagttgac
aaggtgaagaagttggcagtgtatggactgcgggaagagaattctttccacagggtccaa
gtgctagacgtggaaccaaaagaagattccggtgcgttttacaacgtccacatcaagtac
atagacgaaggcagaactggctttgtccaaaatcatcacttgcttagtttaccagaacag
tttcaaacgttgcctccgcaggctgtggaattcataatttgtagggttaaacccattgat
aatgaagcagaatggcatccaaaagtatctagatacattaatgacaaaatcagagggaaa
ccacacgaagcaaaaatagcacttgtcctgggaaatacaatttgggtagatccggtgatt
cgagtcactaaacttcaagacctgaaaacttcaatcaacgaatataatgttcgctctgaa
atcctatctactggattgggagtagacaatcctgagcatatacaggaacttgagaaatta
tttaacgaggctgaaataccccatgagaaaaaagagaagcttgcattacttcatcccccc
atggatggaagaaatgctgaacccgttgagcagaatgtctccgctcctgcaactcttagc
tcagaggccacagacaaaccggccctgcccgttgtacagaaatcgcaacacagccaagat
atcgtccatgatggttattctgaagtacctttagaaaaccattgcaatgaaacggtgcaa
agtaagaacgacgaagacgttccgcagacttcgcctaaatggctccatccagcaataaag
tggtttgacaagcaagatgctgttgttgtgaagataaaattgcaaaatattagtaattac
gactgcaggatttttgaacagagggtcacgttcagcgcttcggcaaacggcaaattttat
ttggccgatatggagctgcagagaagcatcctcagagagaaatcgacttgcgtacttaag
ggcaatgaacccaccattctccttgtaaaagtgaagaaggaaccttggtgcaacttgcta
aaagagaaaaaccatcatgtatcttttgactttgattacttggatgacaatgaggaaaga
agcccattccatgtaggatcaagtcctaagaaaatatatgagattcctataggggtgtgt
gaagaagaagaggaggaagatgaatcttcaaaagatagtgattcagagagtgatttatcc
tcttgttaa
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integrated database retrieval system
