Pantherophis guttatus (corn snake): 117670557
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Entry
117670557 CDS
T07329
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X2
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117670557 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117670557 (EDC4)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117670557 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
117670557 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WD40_CDC20-Fz
EAD9
CelTOS
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
117670557
NCBI-ProteinID:
XP_034281707
UniProt:
A0A6P9CEF4
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MFQQEKINTLLKETLLMLQCIQETLTRNHREMTSMHDTDVRLENFQQMTMKDEQKIQKVE
EKSEGAEERTEEINQQMSQADKDTEGTAKILKMQQRLSEGALSPDGTVLATASHDGYVKF
WQIYIDGQDEPSRCLHEWKPHEGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNQELKM
WCTVSWTCLQTIQFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELVQNQEE
GKAYFSSISEFLLTHPVLSFGIQMVSRCRLRHTEVLSGEEESDGISAEGVQGSGASGSAA
GVLIKLFCVHTKALQDVQIRFQPLHSPDTVTPVPPHGPREDFAFPDHLADIGMEGRGSEK
GSIHGSQPDLRRISELSVPVDFLPPSNDTKPKLMTPDAFMTPSTSLQQITGSPGSSISSL
TAVTTMSSTSVGEPPLPRPSEDMSLSPKMQLDANLTLSGSSGSLQASPRNHSVLLPGLPD
KLTPKVPIPVSPGNPPPLALEQEEVEPLVVPQSSPTRERSPDVISSASTAMSQDIPEIAS
ETLQRSFGAAPSGLPVEILDSNHHTDSMASAASALHLLSPRNRHSSEPSHHSLDMAPNEV
DMLTAPSLLETALPQENVALDSGVSQPWPAAPDITRETRNSMADSPRNEVEEKHKSSCHR
HTYRLLHHDSQDASAEQSDHDDEVASLATTSGGFTTKVTAQRLPVKDWKAKVSPRASPKL
KRKGKKDDRDAPQSPRSFDQQSAPEYQEELMSLLRTQQREIAELRQNQMELMQRLADHLD
AVQSSLMGHIERVIDSQQEQEQRRLEQALAEGQQRSGQLQEHLSQQLSQSLSTAACNRLE
RTIREEMKKTVPPCVSKSLDPITGQLSNTIANKLTAIEGTLKENIAKLVKSKNLTDTIAR
AATDTLQVPMQTAFREAFQSIVLPAFEKSCQSMFQQINDTFKQGTQEYILQLEAQLKNKK
AREQEARDSLLGQLRQMVNSFQSVTDQMTSTITASVHSEIQHQLHVIVGNMQESILAQVQ
RVIKGEVSTAMKEQQAAVTSSIMQAMRSAAGTPIPATHLDFQSQQAHMLQLLQQGHLNQA
FQQALTAADLNLVLYVCETVDPQQVFGQEPCPLSQPVLLSLIQQLSSDLGSRTELKLNYL
EEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNNVSKPARRLMIMLQGLVSQNM
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacaggaaaaaataaatacacttctaaaagaaacgttattgatgcttcaatgt
attcaagaaactttgacaagaaatcatagggagatgacttcgatgcatgatacagatgtg
agactagaaaattttcagcaaatgacaatgaaagatgaacaaaaaatccagaaagtagag
gagaaatcagaaggagctgaggaaagaacagaggagataaatcaacaaatgtcacaagca
gataaagatacggaagggacagcaaaaattcttaaaatgcaacagcgcctgagtgaggga
gcgctttctcctgatggaactgtcttggctacagcaagccatgatggctatgtcaaattt
tggcagatttacatagacggacaagatgagccaagtcggtgcctccatgaatggaaacct
catgagggcaggcctctttcctgtttgctcttctgtgacaaccataagaaacaagaccca
gaggttcctttttggaggtttctcatcaccggagcagatcagaatcaagagctgaaaatg
tggtgcaccgtctcatggacctgcctccagacgattcagttttctccagatatatttagc
tctgtgagcgtccctcccagtctgaaggtctgcctggatctctcagctgagtacttaatt
ttgagtgatgtgcaaagaaaggtcttatatgtaatggaacttgtccagaaccaagaagag
ggcaaagcttacttcagctccatctcagagttcctgttgactcacccggtcctgagcttc
ggcatccaaatggtcagccgctgccgactgaggcacaccgaggtcctctcaggagaagag
gagagtgatggcatcagtgctgaaggcgttcaaggttcaggtgcttcaggctcggcagca
ggggtgctgatcaaactcttctgtgtccacaccaaggcccttcaggatgtccagataagg
ttccagcccctccatagtccagatacggtcactccagtccctccccatggtccccgtgaa
gactttgcattccctgatcacctagccgacataggcatggaaggccggggctctgagaag
ggatccatccatggctcccagccggacttgcgacgcatttcggaactgtctgtgcccgta
gacttcctcccaccatcgaatgacaccaaacccaaacttatgactccagacgcgttcatg
actcccagcacatctcttcagcagatcacgggatctcccggaagtagtattagttccctc
actgctgtgaccaccatgagcagtacttcggtcggcgagcccccccttcccaggccatcg
gaggacatgtccctaagcccaaagatgcagcttgatgccaacctcaccctgagtggcagc
agtgggagtctccaggcaagcccgcggaaccattctgtcctgctccctggccttcctgac
aaactgaccccaaaggtccccatcccggtttccccagggaaccctcctcctttggccctg
gagcaggaggaagtggagcctctggtggtaccccaatcctcgccaactcgtgagcgctcc
ccggatgtcatctcctcagcctcgaccgccatgtcccaggacatccctgaaatcgcctca
gagaccctgcagcgtagtttcggtgcagccccgtctggcctcccggtagaaattctggac
tccaaccatcacacggacagcatggcttcggcggcctctgctctccacttgctttccccg
cgcaaccgtcacagctcagagcccagccatcactccttggacatggcccctaacgaggtg
gacatgctgaccgccccctcgctgctggagaccgccttacctcaggaaaatgtggcgttg
gatagcggggtgagtcagccatggccggccgctcccgacatcaccagggagaccaggaac
agcatggcagacagccccaggaatgaagtggaagagaagcataagagctcttgtcacagg
catacctaccgcttgctgcaccacgacagccaagatgccagtgccgagcagagtgatcac
gatgatgaagttgcaagcttggctaccacttcgggcgggttcacaaccaaagtgactgcc
cagcggctgccagtgaaggactggaaggccaaagtttctcctcgggcctccccaaagctg
aagaggaaggggaagaaagatgacagggatgcgccacagtccccgaggtccttcgatcag
cagagtgctcctgaataccaggaggagctgatgtctctgctcaggacccagcaaagggag
attgctgaactgagacaaaatcagatggagctgatgcaaaggctggcagatcacctggat
gctgtccagagctctcttatgggtcacatcgagcgggtgatcgactcccagcaggagcag
gagcagcggaggctggaacaggctctggcagaaggacagcagcgcagtggacagctgcaa
gagcacctgtcccagcagctctcccagtccctctctacggctgcctgcaatcggctggag
aggaccatccgcgaggagatgaaaaagacagttcccccatgtgtatctaagagcttggat
cccatcactggacagctgagtaacactattgcaaataagctaacagccatcgaaggaact
ctaaaggagaacattgccaaactggtgaaatcaaagaaccttaccgacaccattgcccgg
gcagccaccgatacgttacaggtgcccatgcagacagcatttcgagaggcctttcaaagt
atagttctacctgctttcgagaagagctgccagtctatgttccagcagatcaatgacacc
ttcaagcaaggcacgcaagaatatattctgcagttggaggctcagttgaagaataagaag
gcgcgggaacaagaagcccgggactcgctcttgggccagctccggcagatggtcaactcg
ttccaaagtgtaactgaccaaatgacctccaccattacagccagtgtgcattctgagatc
cagcatcagcttcacgtcattgtgggcaacatgcaagagtccatcttggctcaggtgcag
cgagtcatcaagggagaggtgagcacggccatgaaggagcagcaggctgctgtcacctcc
agcatcatgcaggccatgcgctccgctgcaggcacgcccatccctgccacccacctagac
ttccagtctcagcaggctcacatgctgcaacttttgcagcagggacacctcaaccaagcc
ttccaacaggctctcactgcggctgatttgaatctggtcctctatgtctgtgagacggtt
gacccgcagcaagtgtttggacaggagccttgtcctctgtcccagccagtccttctgtct
ctcatccagcagctgtcttcagatttaggctcccggacagagctcaaactcaactacctg
gaggaggcagtgatgcatctcgatcacagcgaccccatcacccgcgaccacatgggctca
gtgatgaaccaggtgcgccagaaactcttccagttcctacaggtggagcctcacaacaac
gtgagcaagcccgcccgtcgcctgatgatcatgctgcaaggcctggtcagccagaacatg
tcctaa
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integrated database retrieval system
