Pantherophis guttatus (corn snake): 117670591
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Entry
117670591 CDS
T07329
Symbol
USHBP1
Name
(RefSeq) harmonin-binding protein USHBP1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgut03037
]
117670591 (USHBP1)
Cilium and associated proteins [BR:
pgut03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117670591 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Neugrin
SF-assemblin
KLRAQ
DAHP_synth_2
Med28
Motif
Other DBs
NCBI-GeneID:
117670591
NCBI-ProteinID:
XP_034281763
UniProt:
A0A6P9CBW8
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MEEGPQGELGPPGQEESGEEAALHYEESITRLLVTIVRLQGKMERLQQDRAREEEEDFFS
DLGSESTTSLPRYPSLFARRTRSPPPPPPARPEEGKADLFLEVHKAVTSLENVLLSYRNR
RPSVEAELQGCAQLAQGLEARLVALQRDGSGRPPQEAEGPPCERMTALYKERNAALRAEL
EAKQELLSRSKASMAAHQQERKKLQRKVQELQESLSRVEACSGGAPSPLREGAQDSPSGV
AQNSLHPPWGATSMQPAPTLPASPPAEIQNSLEQLHRRLEGLRGLNQLLSGALQESKTDA
EQLSLLLGCQESHQTGLALALHGSERCLEAYETLLALTAAEQKPRPETGGEAPRAAGASK
DPSPALEKASWILQGCSRADGSSWDQEGVPDSSLQPTGSEAEAKQRLWERIGHLRAEQSS
LKLPAHPPPPGLVAVAARLSAGIAAKATEGRRALQEALPGSAAPPRMEKGQLLRELHTAR
EALADLGTRLHLTAKAKQGLALWTQTLPAQEAACLLVIRTLQGEQRDLRGQPDPSSESSS
SSSSEEEDSGAPNSLPQRTLPAAPKNAEGSLARREPEALMLRVLETSARIQALKERLEGL
WVDLEEKSQDYRAHEAQDMELMQDFFQAHSALLLTYQKARHKQESQVGQLETQMGLMARR
QAKQRQALLQTLRQLQDQVPAGAPTGLPQAPAPDESTRDPPGNLEIPSTLWSRK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggggccgcagggggagctgggcccacctggccaggaggagtccggtgaagag
gccgccctgcactacgaggagagcatcactcgcctgctggtcaccatcgtccggctgcag
gggaagatggagcggctgcagcaggacagagccagggaggaagaggaggacttcttttcc
gatttgggctccgagtccaccaccagcctcccccgatacccgtccctctttgccaggcgt
accaggagcccccctcccccgcctccagcccgtccggaagaagggaaggccgacctgttc
cttgaagtccacaaggccgtcacctctctggagaacgtcctcctgtcctaccggaaccgc
cgtcccagcgtggaagccgagctgcagggatgtgcccagctggcccagggtctggaagcc
aggctggtggcgctccagagggacggctcggggaggcccccccaggaggctgagggcccc
ccctgcgagaggatgaccgccctctacaaggagaggaacgccgccctccgagccgagctg
gaggccaagcaggagctcctcagccggtccaaggcctccatggcagcccaccagcaggag
cggaagaagctgcagaggaaggtgcaggagctgcaggagagcctgtccagggtggaggcc
tgctctggaggagcccccagccccctcagggaaggagcccaggactcgccctcaggggtt
gctcagaacagcctccatcctccctggggggctaccagcatgcagcctgcccccaccctt
ccagcctcgccccctgcagagatccagaacagcctggagcagctgcacaggcgcctggag
gggctgcgggggctgaaccagctgctctcgggggccctgcaagagtccaagacggacgcg
gagcaactgagcctcctgctcggatgccaagagtcccaccagaccgggctggccctggcc
ctccacggcagcgaacgctgcctggaggcctacgagaccctcttggcgctgacggccgcg
gagcagaagccgaggccagagacaggaggagaggcaccccgggctgcaggggcatccaag
gaccccagccctgccctggagaaagcttcctggattttgcaaggctgcagcagggccgac
gggagctcctgggaccaagagggggtcccggacagttccctgcaaccgacgggctccgag
gcagaagccaagcagaggctgtgggaacgcatcgggcacctgcgggctgagcagagttcc
ctgaagctgcccgcccaccctccgcctccgggcttggtcgccgtggccgccaggctcagc
gcgggcattgcggccaaggccacggagggacggagggccctgcaggaggcgcttcctggc
tcagccgcaccaccccggatggagaaggggcagctgctgcgggagttgcacacggcccgg
gaggccttggctgacctgggcaccaggctgcacctcaccgccaaggccaagcaggggctg
gcgctctggacccagacgctccccgcccaggaggctgcctgcctgctggtgatccggacc
ctccagggggagcagcgagacctccggggacagccagacccctcctcagaaagcagcagc
agcagcagcagcgaagaggaagactccggggctcccaacagccttccccagaggaccctt
ccggctgcacccaagaacgcggagggaagcctggcccggagggagccggaagccctgatg
ctccgagtgctggagacttcggctcggatccaggcactgaaggaacgtctggagggtctt
tgggttgacctggaggagaagagccaggactacagggcccatgaggcacaggacatggag
ctcatgcaggacttcttccaggcccatagcgccctgctcctcacctaccagaaggcccgt
cacaagcaggagagccaggtggggcagctggagacccagatggggctgatggccaggcgc
caggccaagcagcgccaggcgctcctgcaaaccctccggcagctgcaggaccaagtgccc
gcaggggctcccaccggcctcccccaggcccctgcgccagatgagagcaccagggaccca
cccgggaatttggaaatcccgtccactttgtggagcagaaagtga
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