Pantherophis guttatus (corn snake): 117670754
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Entry
117670754 CDS
T07329
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117670754 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117670754 (THOC5)
03041 Spliceosome [BR:
pgut03041
]
117670754 (THOC5)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117670754 (THOC5)
Spliceosome [BR:
pgut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117670754 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF4175
Inhibitor_I53
Motif
Other DBs
NCBI-GeneID:
117670754
NCBI-ProteinID:
XP_060541110
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRMDGGPQEGKRSRSDLDQDARYYSEEAEVELRDPNRDYELYKQTCQ
DLQRLMAEIQELKSKGHKDSAAEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVDEFYKEAPPEISKSDITL
HDPHEQTLSRLDWELEQRKRLAEKYEESLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYFAMPFDQVHKQYETARHLPPPLYVLFVQASAYGQACDKKLAAAIEGNVEEAKAL
CKPPEDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTINLKCKDGSLL
LLTFYYLMNLNVLTVKAKMTAATEMTVPISAGDLLCPDSLLSCLYPGDHGKRTPNPANQF
QFDKVGILTLNDYVPELGHPYVWVQKLGGLHFPKDQPQNPVVADNSLSASHMERTMKLLK
TRLESRLALHKQFASLEHGILPVSPESQHLFPTKIVSHLVKWMSLTYEDYLELPYTKDVV
ESGLAEDTHLYYLALIERGTAKLQVAVVLNPGYSSIPPVFSLCLNWKGEKTNTNDDNIRA
MESEVNVCYKELSGPKPGYQLLTNQLQRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLR
LARGPSRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgaatccagcaagaagcggaagccgaaggtcattcgcatggatggagggcca
caggaaggcaagaggagcagatcggaccttgatcaggatgccaggtactacagcgaagag
gccgaggtggaactgcgagacccaaaccgagattacgagctgtacaaacagacatgccag
gatcttcagaggctgatggcggagatccaggaactgaagagcaaagggcacaaagacagt
gccgcggagatcgaagagcgacggatccagagctgcgtccacttcatgactctgaagaag
ctcaaccgcttggctcatattcggctgaagaaggggagggaccagactcacgaggcaaaa
cagaaagtcgatgcttatcacctccagctccaaaatttactctacgaagtgatgcatttg
cagaaggagatcacaaagtgtttggagttcaaatcgaagcacgaggagatcgagctggtg
agcgtggatgagttttataaggaggcccctcccgaaatcagcaaatcggacattacgctc
cacgacccccacgagcaaaccctctctcgcctcgactgggaactggagcagcgcaaacgg
ctggcagagaagtacgaagaaagtttagccaacaaagagaagatcctcaaagagatagaa
gtgaagaaagaatatctgagcaatctccagcctcggcttaacagcatcatgcaggcctct
cttcctgtccaggagtactttgccatgcctttcgaccaagttcacaagcaatatgaaaca
gccaggcatctcccacccccactctacgtcctctttgtccaagccagcgcctacggccag
gcctgtgataagaagctggccgcggctatcgaaggaaacgtagaggaagccaaagctctt
tgcaaacctccggaggactctcaggacgacgagagcgattccgatgtggaggaggagcag
actacgaaacgtcgccgaccaactttgggggtgcagctggatgacaagcggaaagagatg
ctgaagaggcaccctctgtccgtcaccatcaacttgaaatgtaaagatggcagtttgctg
ctcctgaccttttactacttgatgaacctcaacgtcctgaccgtcaaggccaagatgacg
gcagccacggagatgacggtgcccatcagcgctggggacctgctgtgccctgattctctt
ctgagctgcctctatcctggggaccacggaaagaggaccccaaaccccgccaaccagttc
cagttcgacaaagtgggcatcctcaccctgaacgactacgtgcctgaactgggccaccca
tacgtgtgggtgcaaaaattgggaggcttgcacttccccaaggaccaaccccagaaccct
gtggtcgccgataactcgctgagtgctagccacatggagaggaccatgaaactgctcaaa
acgaggttggagtcgcgcctggcccttcacaagcaatttgcttccctcgaacatggcatt
ctgcccgtctcccctgagtctcagcacctcttccccaccaagattgtgtcgcatttggtg
aagtggatgtccctcacttacgaagattacttggagctgccttacactaaagacgtggtt
gagtccggtttggccgaagatactcacctctattacttggccctgatcgaaagaggcacc
gccaagctccaggtcgccgtggttttgaaccccggctattcctccatcccgcccgtcttc
agcctgtgcttgaactggaaaggagagaaaaccaacaccaacgatgacaacattcgggcc
atggagagtgaggtcaacgtctgttacaaagaactcagcggccccaagccgggctaccaa
ctcctcaccaaccagttgcaacgcctttgcgttgtcctggatgtgtacctggagacggag
acgcacgacaacagcgtggaggggcctaaggaatttccccaggagaaaatgtgcctgcgc
ttggccagggggcccagccggttgaaacccttcaaatacaaccatcctcaaggcttcttc
agccatcgctga
DBGET
integrated database retrieval system
