Pantherophis guttatus (corn snake): 117670831
Help
Entry
117670831 CDS
T07329
Symbol
HTT
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117670831 (HTT)
04131 Membrane trafficking [BR:
pgut04131
]
117670831 (HTT)
03029 Mitochondrial biogenesis [BR:
pgut03029
]
117670831 (HTT)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117670831 (HTT)
Membrane trafficking [BR:
pgut04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117670831 (HTT)
Mitochondrial biogenesis [BR:
pgut03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117670831 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
117670831
NCBI-ProteinID:
XP_060544846
LinkDB
All DBs
Position
Unknown
AA seq
3080 aa
AA seq
DB search
MAAMEKLMRAFEALRSFQQQQLPPPPPQPSPAPEEPPARPKKELSTSKKDRVNHCLTICE
NIVAQSLRNSPEFPKLLGIAMELFLLCSDDAESDVRMVSDECLNKVIKALMDSSLPRLQL
ELYKEIKKNGASRSLRAALWRFAELAHLVRPQKCRPYFVNLLPCLTRVSRRPEESVQETL
AAAMPKIMAAFGNFANDSDIKVLLKAFIGNLNSNSPTIRRTAAAATVSICQHSRRTQYFY
TRLLQVLLGLLCPTEEEHPSVLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVIQKETEIS
PSLDQLIQVYELSLHYTQHRDHNVVTGSLELLQQLLRTPPPNLLLALTMRGGLLQAGAAE
DEIAGRGRSNSIVELIAGGGSSCSPVFSRKQKAKVLSGEESLEEDSEARSQASQVGFAGS
GKSELNSELTSTPGVSPAASSASDPPGCDIITEQPRSQHVLQSESEISACDLTGTTPKAD
TDDDMLSRSSSQISAIQSEVNDGTSSPISDSSQTTTEGPDSAVTPSDFSEMILEGGENQY
SGMQIGQLQEEEDEXANVLHDETLDPFRNSCLELQRSHLAKTVSHRREPSNGSMEKFGPK
EETELADHGIKLSRMKGDIGGYKDGSAAPLVHCVRLLSASFLLTGEKGALVPDKDVRVSV
KALAISCVGAAVALYPEAFFSKLYKMPTESNKEEREQSVKDIVNYIDHGDPQIRGTTAIL
CGTIVYSILVQSCFSVETWLENIKASTGTLVECVSLLQKSLKDESSVTCKLACIAVRHCI
MSLCGSSHSSLGLQLLVDLLLLRNSSYWLVRTELLETVAEIDFRLIQFLEERDSNLHRGD
YHYAGLLKLQDRVLKEVVISLLGDEDPRVRRVAAAALVRLVPKLFYSCDAGQTDPVVALA
KEQSSVYLKLLMHETPPTSHFAVSTITRTYRGYNLMPSPADVTVENNLSRVISAVSHALT
TSPSRSLTFGCCEALCLLSSSFPVCTWNVGWHCGVPGEERSWIVGLLLSLLSSVSFPLDL
SAHQDALILAGNLLAATASKSLQNPWTHSEDEASVPAAKQEDSWVALSDRTLALLVDHLF
SHLLKIINICSHILDDVVPGPTLKATLPSLTNPPSLSPIRRKAKEKEATEQATVAISPKK
TSENSPAPRQSDTSSSTPPSKSSSTLGNFYHLPSYLKLYDVLKATYANYKVTLDLQNVNE
KFGGFLRSALDVLSQILELATLQDIGKYVEEILCYLKSCFNKEPVMATVCVQQLLKTLFG
TNLASQFDSWSSNSCRAQAKCQRLGSSSLRPGLYHCCFMAPYTQFTQALADASLRNMMQA
EQERDTSGWFDILQKVSAQLKTGTANMAKHRADKNIIHNHIRLFEPLVIKALKQYTTTTS
VQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPSVFFFL
VLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFILRGANKADAG
KELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHRENEEKWKRLSRQVADIILPMLAKQ
QMQIDSHEALGILNTLFEILAPSALRPVDMLLRSMFVTPSTMASVSTVQLWVSGILAILR
VLISQSTEDIVLSRIQELSFSPYLISCQTINRLRNGESKVPPTQETSTDEQDRFLPEETF
SRFLIQLVGILLEDIASKQLNVETSEQQHTFYCQELGTLLMCLIHTFKSGMFRRITAAAT
KIFTENGPHGLHFYTLERLNDLVKSMIATHPSLVLLWCQILLLVNYTNSSWWSEVHQTPK
RQSLSGAKLLSPQPSGDPHEDDGGSKLSICNREIVRKGSLILFCDYVCQNLHDSEHLTWL
TVNHVQELISLSHEPPVQDFISAIHRNSAASGLFIQAIQSRCENFASPTAVKKTLQCLEG
IHLSQSGAVLVLYVDKLLSTPFRVLAHMVDTLACRRVEMLLAASVQNSTVQLPVEELDRI
QEYLQNTGLAHRHQRLYSLLDRFRLTVAPETISPSPLVTAHPLDGGNHPDLETLIPDKDW
FCSLVRSQCYTKSAFALPEGAELMNRLPEQELIPFMMHQDFNISLLAPCLSLGGQELSRG
LRSHFEAARLVTLHQVTEVVNKLPASHQVFQPTQPVGSSPYWNKLSNIYGDPEMFQFAMV
LAQALSQYLVSLSKLPTSLRIPPEKENDIVKFVVMLLEILSWHLARKQVPLSMDLQAVLD
CCCLALQQTELWNLWASAENSSQASSLIHCTRFILEAVAIEPGNRLLSPEKRKKIQKAGS
ENERGSQTPNSESITATCEVVAELVECLQSVLALGHKKNSPIPAFLTPVLRNIIISLSRL
PLVNSYARVPLLVWKLGWSPKPTGEFGTTFPEIPVEFLQEREVFKEFIYRINTLGWTNRM
QFEETWASLLGVLVTQPIVMDQEENQQEEDMERTQINVLAVQAITSLVLSAMTIPLAGNP
AVSCLEQQPRNKTLKALDTRFGRKLNIIRGIVEQEIQEMASKRDNVACHHVYQMWDPVPS
LAPSTTGSLISHEKLLLQINTEREMGNMTYKLGQVSIHSVWLGNSITPLREEEWGEDEDD
ESDMPAISSPPSSPINSRKHRAGVDIHSCSQFLLELYSQWILPSSPNKKTPVTLISEVVR
SLLAVSDLFTERNQFEMMYATLTELRKVHPSEDEILLQYLVPAMCKAAAVLGMDKAVAEP
VSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPVITEYLLSNLRGVAHCVN
LHNQQHILVMCAVAFYLIENYPADVGPEFSSGIIQMCGVMLSENEGSTPSVIYHCVIRGL
ERLLLSEQLSPPDCEALVKLSVDRVNVLSPHRAMAALGLMLSCMYTGKEKVSPGRSADPH
SAAPDSESVIVAMERVSVLFDRVRKGFPFEARVVTLILPQFLDDFFPPQDVMNKVIGEFL
SNQQPYPQFMAKVLYKVFQSLHTTGQSSMVRDWVMLSLSNFTQRTPIAMAMWSLSCFFVS
ASTSQWISGILPHIISRMGKSEQVDLNLFCLVAIDFYRHQIDEELDRRAFQSIFEVVSSP
GNPYHRLLTCLQSIHKITPC
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatggagaagctgatgcgggccttcgaagcgctgcgctccttccagcagcag
cagctgccgccgccgccgccccagcccagccccgcgcccgaggagccgcccgcccgccca
aagaaggaactgtccacctccaagaaagaccgagtcaatcattgcctaacaatatgtgaa
aacatcgtggctcagagtttaagaaattctccagaattccccaagctgttggggatcgcc
atggaactcttcctcctctgtagcgatgacgcggagtccgatgtcaggatggtctccgat
gaatgtctcaataaagtgataaaagccttgatggattccagtcttcctagattacaattg
gaactctacaaagagattaaaaaaaacggtgcttcccggagtttgcgggctgctctgtgg
agatttgcggagcttgcacaccttgttagacctcagaaatgcaggccgtactttgtgaac
ctcctgccctgcttaacccgggtcagccggcggcccgaagaatccgtgcaagagaccctg
gctgcggcgatgcccaaaatcatggcagcgtttggcaacttcgcaaacgacagcgacatc
aaggttttattgaaagctttcataggtaatcttaactccaattctccaaccatccgtcgg
acggcggccgcagccacggtgagcatctgtcagcattcacgaaggacgcaatatttttac
actcggttgcttcaagtattgctaggactgttgtgtcccacggaagaagagcaccccagt
gtcttgattctcggggtgttgctcaccttgaggtacctgatcccgttgctgcagcagcag
gtgaaggacaccagcctgaagggcagcttcggggtcatccagaaagaaaccgagatttcg
ccttccttggatcaactcatccaggtgtacgagctgagtctccattacactcagcaccgg
gatcacaacgtcgtcaccggatccctggaactgttgcagcagctcctccggacgcctccc
cccaacctcctcttggccctcacgatgcgcggggggcttttgcaagcgggggcagccgaa
gatgagattgccggccgcggccgcagcaatagcattgtggaactgattgctggagggggg
tcttcctgcagccctgttttttccagaaaacaaaaagccaaagtactttcaggagaggag
agcctggaagaggattccgaagccaggtctcaagccagccaggtgggctttgcagggtct
gggaaaagcgagctgaacagtgaattaacttccacgccgggcgtctcgcccgcggccagc
tcagcctccgaccctccgggttgcgacatcataacggagcagccccgttctcagcacgtc
ttgcaatccgaatcggagatctctgcttgcgatttgacgggcacgaccccgaaagccgat
acggacgacgacatgctgagcaggagctccagccagattagcgccatccagtccgaagtg
aacgacggcacctcgtcgcccatcagcgacagctctcagactaccaccgaagggccggac
tcggcagtgaccccgtccgatttctctgaaatgattctcgaaggcggtgagaaccaatac
tctggaatgcagattgggcagctgcaggaggaagaagacgaanacgccaacgttctacac
gacgagactttggatccgttccgaaattcctgcctcgagcttcagcgatctcatttagcg
aaaactgtgagccacaggagggagccttccaatggcagcatggagaagtttgggcctaag
gaagaaactgaactggctgaccatggaattaagctctccagaatgaaaggtgatatcggg
ggctataaggacggaagtgctgcgccattagtccactgcgttcgcctcctgtcggcctct
tttctgctcactggagagaaaggggctctggtgccggataaagacgtcagggtcagcgtg
aaagccttggccatcagttgcgtgggggcagccgtggccctttacccggaagctttcttc
agcaaactctacaaaatgcccactgaaagtaacaaagaagaaagagagcagtccgtgaag
gacattgtgaattatatcgaccacggagacccccagatcagagggacaaccgccattttg
tgcggaaccattgtttattccatcctcgtccagtcttgcttcagtgtggaaacttggctg
gaaaatataaaagcgtccacagggacgctggtggagtgtgtctccttactacagaaaagc
ctgaaagacgagtcttcggtcacgtgcaaattggcctgcatagctgtgaggcactgcatc
atgagcttatgcggcagcagccatagttccttggggttgcaattactggttgacctcctt
ctcctgaggaacagttcctactggctggttaggacggagcttctggaaacggtggctgaa
atagattttcggttaatccagtttttggaagaaagggacagcaatctgcatagaggggat
tatcattacgctgggctgttaaaacttcaggatcgggttctgaaggaagtggtcatttct
ctcctaggcgacgaagatcccagagtcaggcgtgtggctgcagctgctttagtaaggctg
gtcccaaagctgttctatagttgcgacgcagggcagactgatccggtcgtagctctggcc
aaggagcaaagcagcgtctacctgaagctcctgatgcacgaaaccccaccgacttcccac
tttgcagtgagcaccatcaccagaacctacagaggatacaacctgatgccaagtccagcc
gatgtgacagtggagaacaacctttccagagtgatctcggccgtgtcccatgcgttgacg
acctcaccctccagatccctgacttttggctgctgcgaagcattgtgtcttttgtcctca
tcgtttccggtttgtacctggaatgtgggatggcactgtggagtcccaggagaagagcgc
agttggatagttggcttgctcctctccctcctttcctccgtttcgttccctctggatctc
tctgcccaccaagacgccttgatcctggctgggaatttgctggcagccaccgcctccaaa
tctttgcaaaacccctggacgcacagcgaggacgaagccagcgttcctgccgctaagcaa
gaggactcgtgggtggccctgtcagaccggacgcttgccctgttggtcgatcacctgttt
tcccatttgctgaagatcattaatatttgttcccacatattggatgatgtcgttcctggc
ccgacactgaaggcgacgttaccatctctcaccaacccaccttcgctgagtccaattcgg
cgcaaagcgaaagaaaaagaagcgacggagcaagccacggtcgccataagccctaaaaag
acgagtgaaaacagcccagctccgagacaaagtgacacttcaagctccactcccccgagt
aaatcctcgtccactctgggtaacttctaccatctcccatcgtatctcaaactctacgac
gttctgaaggccacctatgccaactataaggttacactcgatctccaaaacgtcaatgaa
aagtttggtggattcctgagatcagctttggacgttctgtctcaaatcttagaactggca
actctacaagacattggaaagtacgtggaagaaattctgtgttacctgaaatcctgtttc
aacaaagaaccagtcatggcaactgtgtgtgttcagcagttactcaagaccttgttcggc
accaacttggcctcgcagtttgacagctggtcttccaactcctgccgagctcaggccaaa
tgccagcgcttgggctcctccagcttacggccgggcctttaccactgctgcttcatggct
ccttacacccagttcacccaggccttggccgacgcgagtttgaggaatatgatgcaggcc
gagcaggaacgggacacctcaggctggtttgacatattgcaaaaggtttctgcgcagctg
aaaactggcaccgcgaatatggccaagcaccgtgctgacaagaatatcatccacaatcac
atccgtctgtttgaaccgctggtcatcaaagcgctaaagcagtacaccaccactacgtcc
gtacaactgcagagacaagtcttggaccttctcgcccagctcgtccagctgcgggtcaac
tattgtcttctggactccgaccaagtatttattggatttgtgctgaagcagtttgaatac
attgaagtcggccaattcagggaatcggaggccattattccgagcgtctttttcttcctg
gtgttgttgtcttacgagcgctaccactccaagcagatcattggaatccctaaaattatt
cagctctgtgacgggatcatggccagcggaaggaaagcagtgacacacgcaatcccggct
ctgcagcccatcgtccacgacctcttcatcttaagaggagcgaataaagctgatgccggc
aaagaattagaaacccagaaggaagtcgtggtctcgatgttgttgcggctgatccagtat
caccaggtgctggagatgttcatccttgtgctgcaacagtgtcaccgagagaacgaagag
aaatggaagaggctgtcgcgacaggtagccgacatcatcctgccaatgctggccaaacaa
cagatgcaaatagattcccacgaagccctggggatcttgaataccttgtttgagatcctg
gcgccttccgccctgcgcccggtggacatgctgctgaggagcatgtttgtgacgcccagc
accatggcttcagtgagcaccgttcagttatgggtctctggcattctggctattctgcgg
gtcttgatttcccagtccaccgaagacatcgtcctctcccgcatccaagagctctccttt
tccccgtatctcatctcttgccaaacaattaaccggctgcggaacggggaaagcaaagtt
cctcccactcaggaaacctccacggatgagcaagatcgctttcttcccgaagagaccttt
tccagattcctcatccagttggtggggattctgctggaagatatcgccagcaaacaattg
aacgtggagacgagcgaacagcagcacaccttctactgccaggaactgggcacccttctc
atgtgcttaattcataccttcaaatcagggatgttccgaagaatcacggctgcggcgacc
aagatttttaccgagaatggaccgcacggtcttcatttctacaccctcgaaagattaaac
gatcttgtcaagtccatgatagccacgcacccatccctggtgcttctctggtgtcagatc
ctgctgcttgttaactacaccaattccagctggtggtccgaagttcatcagacccccaaa
aggcagagtctgtcaggcgctaagttgctcagccctcaacccagcggggatccccacgaa
gacgacggcggctccaagctcagcatctgcaaccgcgagatcgtgcggaaaggttccctc
atccttttctgtgactacgtgtgccaaaacctgcacgactccgagcacttaacctggctg
accgtcaatcatgtccaagaactcatcagcctgtctcacgaacctcccgtccaggatttc
ataagcgccattcacagaaactcggcggcgagtggacttttcatccaggctattcagtca
cgatgtgagaacttcgcctccccgacagcggtgaagaagacgctgcagtgtttggagggg
atccacctgagccagtcaggggctgtgctggtcttgtacgtggacaagcttctctcgact
cccttccgtgtgctggctcacatggtcgacaccctggcttgccgtcgtgtggaaatgctt
ttagcggcgtcggtgcagaacagcacggttcagttgccagttgaagagctggaccgaatt
caggaatatctgcagaacaccggattagcccacagacatcaaagactctactcactcttg
gaccggtttcgtctaactgtggctccggaaaccataagcccctcacctttggttacggca
catcccctggatggagggaaccatcccgatctagaaacgttaattccagacaaagattgg
ttctgttcactcgtgaggtcccagtgctacacaaaatcagctttcgctcttccagaaggt
gccgaactgatgaatcggcttcctgaacaggaattgattccttttatgatgcaccaggat
ttcaacatcagcctcctcgccccgtgtttgagcctgggcgggcaggaactctcccgaggg
ctgaggagccattttgaagccgcccgcctcgtcacgctgcaccaggtgacggaagtggtg
aacaaactccccgccagccatcaagtcttccagccgacgcagccagtgggatcgtccccg
tactggaacaaactcagcaatatttatggagacccagaaatgtttcagttcgcaatggtt
ttagctcaggctttaagtcagtatctggtgtcgctttccaaactgccaacttcccttcgc
attcctccggagaaggaaaacgacattgtgaagttcgttgtgatgctgctagagatcctg
tcttggcacttagcacgcaagcaggttcccctaagtatggatctccaggctgtgctggat
tgctgttgcctggcgttgcaacagacggagctgtggaatctctgggcatcagcagagaac
agcagccaggcgtcctccctcatccactgcacccgattcatcctggaagcagtggcaatt
gaaccgggaaatcgtctcctgagtccagagaaaagaaagaagattcagaaggctggcagt
gagaacgaaagaggttcacaaacaccaaattctgagtccattacggcaacttgtgaagtg
gtagccgagttggtagaatgcctgcagtctgtcttggctctggggcacaagaagaacagc
cccatccccgcattcctgacccccgttctgaggaacatcatcatcagcctgtctcggctg
cccttagtcaacagctacgcccgggttcccctcctggtctggaaattgggctggtcccca
aagccgacgggtgaattcggcacgacgtttccagaaatcccggtggaatttctccaagag
agagaagtcttcaaagaatttatctaccgaattaacacattggggtggacaaaccgcatg
cagtttgaggaaacctgggccagcctcctgggagttcttgtgacccagccgatcgtcatg
gatcaggaggaaaaccagcaagaggaagacatggaaaggacccagatcaatgttctggct
gttcaggcaatcacctccttggtgctgagcgccatgaccatccctctggccggcaatcca
gccgtcagctgtttggagcagcagcctcgaaacaaaaccttgaaagctcttgacaccagg
ttcgggagaaaattgaacattatccgaggaattgtcgagcaagaaatccaagaaatggcc
tctaagagagacaacgttgcttgccaccatgtatatcagatgtgggaccctgttccatcc
ctggccccctctaccacaggttccctcatcagccacgagaagctgctgcttcagatcaat
acggagcgtgaaatggggaatatgacctacaaactaggacaggtctccatccattctgtg
tggctgggaaatagcattaccccgttgcgggaagaagaatggggcgaagacgaagatgat
gagagcgacatgcctgccatttcctcgcccccttcctcccccatcaattccaggaagcac
cgcgctggggtagacattcattcgtgttcccagtttctgctggaattatacagtcaatgg
attctcccatccagccccaacaagaagacaccggttaccctgatcagcgaagtggtccga
tcccttttagccgtctctgatttatttacggagagaaatcagtttgaaatgatgtacgcg
acgttaactgaactgcggaaagtccatccgtcggaagacgagatccttcttcagtatttg
gtccccgctatgtgcaaagcagcagctgtccttggcatggataaagcggtggcagagccc
gtcagccgcctgctcgaatcgacgctccgcagcacgcacatgccgagccgaattggcgcg
ctgcacggcatcctgtacattttggagtgcgatctcctggacgagacagcgaagcaactt
attccggtcatcaccgaatacctgctgtccaatctgcgtggcgtagcccactgtgtgaac
ctccacaaccagcaacacatcttggtcatgtgcgcagtggccttctacttaatcgaaaat
tacccggctgacgtcggacctgaattctcttccggaattattcagatgtgcggagtgatg
ctatccgaaaacgagggatccaccccgtcggtgatctatcactgtgtgatcagaggtctg
gaaaggctcctgctttcggagcagctctctccgccggactgcgaagcgctggtgaaactg
agcgtggaccgtgtgaacgtcctcagtccgcacagagccatggccgccttgggactcatg
ctgagctgcatgtacacaggaaaagagaaagtcagtcccggacgaagcgcagatccccac
tcggcagctccggacagtgaatcggtcatcgtggcaatggaacgagtatctgtcctcttt
gaccgggtcaggaaaggattccccttcgaagcccgagtggtaactctgatcctccctcaa
ttcctggatgactttttccccccgcaagacgtgatgaataaagtgattggggaattttta
tccaaccagcaaccctacccacaatttatggcgaaagtactctacaaggtctttcagtcc
ctgcatacgacgggtcagtcctccatggtccgagactgggtgatgctgtcgctctccaac
ttcacacagcggacgccgatcgccatggcgatgtggagcctttcctgttttttcgtcagc
gcttccaccagccagtggatttcaggaattctcccacacattatcagcagaatgggaaaa
tcggaacaagtcgacctcaatttgttctgcctggtggccatagatttttacaggcatcag
atcgacgaagaattggatcgcagagcctttcagtccatcttcgaagtggtctcttccccg
ggaaatccgtaccaccgcctgctgacctgcttacaaagcattcacaagatcaccccgtgt
tga
DBGET
integrated database retrieval system
