Pantherophis guttatus (corn snake): 117670839
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Entry
117670839 CDS
T07329
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04622
RIG-I-like receptor signaling pathway
pgut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117670839 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117670839 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgut04054
]
117670839 (IFIH1)
Enzymes [BR:
pgut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117670839 (IFIH1)
Pattern recognition receptors [BR:
pgut04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
117670839 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
CARD_2
DEAD
Helicase_C
ResIII
DUF3638
AcetDehyd-dimer
Cas3-like_C_2
PhoH
GFA
Yippee-Mis18
PDCD10_N
Motif
Other DBs
NCBI-GeneID:
117670839
NCBI-ProteinID:
XP_034282204
UniProt:
A0A6P9CH14
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MEAAASPSRDESILYLISCFRTRIKSSVQVNRVLDLMPSLSLDRKRQLRAVAGEKGDMEA
AEKLLSVVEKEAGDSPGLCQEFCQALVQGGYDAGNYLDPSLNELPSPSLEAAGDLGKALV
NLFFDRLTDTLQATQVAMKCFENGLLDVEDMERVIVEKNKQGNKSAVREMLFRIVQKKEW
LSPFLKALDEAGHANMAAYISGHPNEEDINGDCDSTNEMYDAPSSEVVENLQPRTELQEA
VEEEKNVSEKSFEDLPAISESDVSLQETDACDVSTNFGQMNLYCDDSDHVESRDQRPSSE
KELSLRDYQMEVAKPALEGKNIVICLPTGTGKTRVAVYIAKDHLDKKRKAKECGKVIVLV
NKVPLVEQHLENEFGPYLKHSYRTIGLSGASQLKFSFPELIREYDVIICTAKILENALEK
VYEDDEEGVQLSVFSLMIIDECHHTQKEAVYNNIMRYYLKEKRENEKRKKEGKQLVAQPQ
ILGLTASPGVGGATNHSKAEEHILTICANLDADEIVTVQEHIAQLQHQAKEPVKKFEIAD
VKKKDPFREKLVNIMTEIQGYGQFSPNVDFGSQAYEQWVIQEEKKAAKEGTRKERVCAEH
LKKYNDALLINDTIRMIDAYNHLKNFYEEERSRKMAMDEDKEDELIASQLDETNTRLIEL
FYDRQRELEELAEELQYENEKLTKLRTTLMQQFTKNNEPRGIIFSKTRQSAFAIYQWIND
NPKFEEVGVKAHYLIGTGHNSEFQHMTQNEQKDIIQKFRTGKINLLIATTVAEEGLDISQ
CNIVIRYGLVTNEIAMMQARGRARAEESVYVLVASDGSGAAERENVNMYREKMMHRAIKR
VQKMPHEKYLHKIKELQLQSCMEMKMKAKKEQFKQYKENPSLIMFHCKNCNDPKCSGDDI
QVILNNHHVNVKKEFEDLYTVKENKTLQAKKADYQTNGDIFCKNCGQIWGTMMVYKGLDL
PCLKIKNFVVYFKDKKCTSKKIYKKWRELAINFPAFSYADHYISSEED
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggccgccagcccatcccgggacgagtccatcctctacttgatctcttgcttt
aggaccaggatcaagagcagcgtccaagtgaatcgagtgctggatttgatgccgtcgctc
agcctcgaccgaaaacgccaactccgcgccgtggctggagaaaagggggacatggaagcc
gcggagaagctgctctccgtggtggagaaagaggcgggcgactcgccgggcttgtgccag
gaattctgccaggcgctggtgcagggaggctacgacgctggcaattacctggatcccagc
ctgaacgaactgccctcgccctctttggaagcggccggcgacctgggcaaggctctggtg
aacctcttcttcgatcgcctcaccgacacgctgcaggccactcaggtggctatgaagtgt
tttgaaaatgggctcttggatgtggaagacatggagcgggtgatcgtcgaaaagaataaa
caggggaataaatcggcagtgagagaaatgctttttaggatagtacagaagaaagaatgg
ctgtcaccctttctaaaagccctggatgaagcgggccatgcaaacatggctgcttacata
agtgggcacccaaacgaagaagatataaacggagactgtgactcaacaaatgaaatgtat
gatgcaccaagttctgaagttgtggagaatctgcaaccaagaactgaattacaagaagct
gtggaggaggagaagaatgtatcagaaaaatcatttgaagacctccctgcaatttcagaa
tctgatgtcagtttgcaagaaacagatgcctgtgatgtgagtacaaactttggacagatg
aacctttactgtgatgattcagatcatgttgaaagtagagaccaaagaccttcctctgaa
aaagagctgagcctgagagactatcagatggaagtggccaaaccagctttggaagggaaa
aatattgttatatgccttcccacaggcactggcaagactcgagttgctgtttacattgcc
aaagaccacttagataaaaaaagaaaagcaaaagaatgtggaaaggttatagttcttgtc
aacaaggtgccattggtggaacagcatttagagaatgaatttggtccctatttgaagcat
tcgtaccgaacaataggactgagtggggcgtctcaactgaaattttcattccctgaacta
attagagagtatgatgtgattatttgtacagctaagatcctggagaatgcattggagaaa
gtgtatgaagatgatgaagaaggagtccagttatcagtgttctctttgatgatcattgac
gaatgccatcatacccagaaagaagctgtctataacaatatcatgcgttactacttaaaa
gaaaaaagggaaaatgagaagcgaaagaaagaaggaaaacaactggtggctcagcctcag
attctggggttgacagcctcacctggagtgggaggtgcaacgaatcactcaaaagcagag
gaacatattctaacaatatgtgccaacctggatgcagatgagattgtgactgttcaagag
cacattgcgcaactgcaacatcaagcaaaagaacctgttaagaagtttgagattgcagat
gtcaaaaagaaggatccatttagagagaaactcgtaaatattatgactgagattcaaggc
tatggccaattcagtccaaacgttgattttggatcacaggcctatgaacagtgggtaatt
caggaggaaaagaaagctgccaaggaagggactcgtaaagagcgggtatgtgcagaacac
ttgaagaaatacaatgatgccttgctgattaatgatactatccgcatgattgatgcctat
aaccatctgaagaacttttatgaggaagaaaggagcagaaagatggcaatggatgaagat
aaggaagatgaactcatagcctcacaactagatgaaaccaatacacgtcttatagagttg
ttttatgacagacaaagagagctggaagagttagctgaagaactacaatatgaaaatgaa
aaactaacaaagttgcgcacaactttaatgcaacaattcacaaagaacaacgaacccaga
ggaattattttctcaaaaactcgtcaaagtgcctttgctatctatcaatggattaatgat
aatcccaaatttgaagaagttggagtgaaggctcactacctcattggtacaggacataat
agtgaatttcagcacatgactcagaatgaacaaaaggatatcattcaaaagttccgtact
ggcaaaatcaacttactaattgctactaccgtagcagaggaaggcctggatatctcacag
tgcaacattgttatacgctatggtcttgttaccaatgaaatagccatgatgcaggctcgg
ggaagagctcgagctgaggaaagcgtctatgtgcttgtagcttcagatggatcaggagct
gctgaacgtgaaaatgttaatatgtatcgtgagaaaatgatgcatcgagcaattaagcgc
gtccaaaagatgccacatgaaaagtatttgcataagatcaaagagcttcagctgcaaagc
tgcatggagatgaaaatgaaggcaaagaaagaacagtttaaacaatacaaagagaacccc
tccctgatcatgttccactgcaaaaactgcaacgatccaaaatgctcaggagacgacatt
caagttattttgaataatcatcacgtcaatgttaaaaaggaatttgaggacctttatact
gtaaaggaaaacaagacactgcaagcaaaaaaagcagattatcaaacaaatggggacatc
ttttgtaaaaattgtggccagatttggggaactatgatggtatacaaaggtctagatctt
ccttgcttaaaaataaaaaattttgtggtgtatttcaaagataagaaatgcacctcaaag
aaaatatacaaaaaatggagagaactagccattaattttccagctttcagttatgcagat
cattatatctctagtgaagaagattaa
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