Pantherophis guttatus (corn snake): 117671137
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Entry
117671137 CDS
T07329
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04510
Focal adhesion
pgut04512
ECM-receptor interaction
pgut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117671137 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117671137 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117671137 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgut04147
]
117671137 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
pgut00536
]
117671137 (COL4A2)
Exosome [BR:
pgut04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117671137 (COL4A2)
Glycosaminoglycan binding proteins [BR:
pgut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117671137 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117671137
NCBI-ProteinID:
XP_034282737
UniProt:
A0A6P9CHE6
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MKSTPHFSLGCWTGQDMQIILLVGLTVLLPACVQAGGKSYTGPCAGRDCSGGCECFPEKG
GRGQPGLLGQQGFPGPSGVMGIPGLSGHKGDKGERGRPGITGPKGEAGQRGVTGFPGADG
VPGHPGEGGSRGKPGHDGCNGTKGDPGSQGIQGPSGTPGFFGIQGPKGQKGEPFGLPEEL
AIQFRGNRGDPGLTGFIGPQGAPGLVGEPGLEGDPGLPGLPGPPGPPGPIGYRGLGFYGE
KGEKGEVGSPGPPGCPSTGELISSIDEILSEHKGMKGRKGMMGQPGFPGFPAQGAEKGEE
GITGFPGQRGLPGINGLKGAEGDVGLPGNYGIRGIPGQKGMTGEPGDKGIRGPPGHAQQP
TLIKGVPGDRGMDGIPGPKGERGTKGSPGPPGAEGASFDDVSEGRGFPGEMGPKGFIGDP
GFPAIHPGPPGLDGEPGTPGFPGSPGPPGSPGYSVGLKGYSGVQGPAGQQGYPGPRGQKG
LKGDTGDCICVEGRRGPAGQPGPPGFQGPIGYAGGKGELGDQGYHGLPGFPGRKGFPGES
GPPGPKGIKGDSQYVTTKGAKGDPGTPGFPGSQGEDGLPGRNGIDGLPGFPGLRGDGIRG
EQGEPGGAGQPGPKGFPGETGLPGVGLPSPKGHRGPTGDPGTYGNPGFQGPPGPPGTPAQ
TECGQTEDRFLRDNRTESIHSGTSCVTAPKGAPGYPGLPGLPGAKGTKGIPGEFGLNGSQ
GLKGLQGDQGRGGAAGPAGFTGPRGSRGAPGMPGERGLLGNPGLPGLPGLLGEKGLTGDV
LGAPSGSPGDPGPPGFPGTKGSQGDQGLPGIKGRDGFPGSPGSKGNPGFPGPTGLTGIRG
PPATFGFPGLPGQQGSLGKKGSQGFVGSPGVRGEPGEAGKVGPVGMKGLPGDKGEPGFIG
TKGKAGETGHHGIVGMPGFPGLKGSKGSPGIGGFSGAMGFKGWPGQKGIHGEKGLPGTQG
AKGPSGEFGLKGERGIRGLPGAPPKITPNVMLEVKGEKGNKGVFGVKGNIGLKGHEGLLG
LPGQTGISGLPGFPGFEKGQKGDTGIKGIRGVPGYTGIPGSRGIPGFPGITGWRGEKGVP
GVPGVIGESGQLGEIGDRGDTMNLPGSKGSKGIPGIAGPAGLKGNRGKKGEAGGQGYAGV
EGMEGPQGSQGLIGQRGFPGKFGEQGASGDPGIPGSSGDKGNVGNIGLPGRKGVHGLRGL
PGLDGLPGSKGLSGSPGPDGYGISGFLGVLGEKGTAGDPSPIQGSRGPPGQKGQRGDPGW
RGSAGAPGPDGRQGFPGVSNISGIPGDVGSPGFDGVPGYPGPPGTPGTAGSFAFKGEEGS
IGVAGEDGLKGIRGDPGPDGRPGISGLAGAKGYKGEQGVMGFVGQTGISGDFGPIGPKGD
RGPPGFQGPPGSPGLPPLLPKLVAEQGTPGAHGKIGPQGPAGEMGPHGPPGDPGFRGPIG
KPGAQGGGGIAASPGFRGDQGGQGLHGPAGFEGTAGVPGTPGLQGMPGRSVNIGYLLVKH
SQSTQEPMCPEGMNQLWSGYSLLYFEGQDKAHNQDLGLAGSCLARFSTMPFLYCNPGDVC
YYASRNDKSYWLSTTASLPMMPVAEEEIRPYISRCSVCEAPALAIAIHSQDITIPHCPEG
WRSLWIGYSFLMHTGAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFW
LTTIDHQFQHSPSSDTLKAGLIRTHISRCQVCMKNL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtactccacacttcagcttaggatgctggaccgggcaggatatgcaaattatc
ctcctggtgggattgactgtgcttcttcctgcctgtgtacaagctggaggaaagtcctat
actggaccatgtgcagggagagactgcagtgggggctgtgaatgttttccagaaaaagga
ggtcgtggccagccaggactgcttggacagcaaggattccctgggccatcgggcgtgatg
ggcataccaggactttcagggcacaaaggggacaaaggtgaacgaggtagacctggcatt
actggaccgaaaggagaagcgggacaaagaggagtcacagggtttcccggtgcagatgga
gttcctggtcacccaggtgagggaggatcaagaggaaaaccaggccacgatggttgcaat
gggaccaagggagatccaggctcacagggaattcagggaccttctgggactcctgggttt
tttggaatccagggacccaaaggtcagaagggggagccttttggactgcctgaagaatta
gctatacagttcaggggaaatcgtggtgacccgggcttaactggcttcattggaccacaa
ggtgctcccggactggtgggtgaacctggtctagaaggagacccaggtcttcctggactt
ccaggacccccaggacctccagggcccattggctatagaggtcttggcttttatggagag
aagggtgaaaagggtgaagttggatctcctggtccacctgggtgcccatcaacgggagaa
ttaatcagttcaatagatgaaattctaagtgaacacaagggtatgaaaggaagaaaagga
atgatgggacaacctggatttccaggttttcctgcacaaggagcagaaaagggagaagaa
ggaataactggctttccaggacaaagaggtttaccaggaatcaatggcctaaaaggagct
gaaggagatgtgggtctcccaggaaattatggaatccggggcattcctggtcagaaaggg
atgacgggagaacctggagataaaggaattcgagggccaccaggtcacgcacaacaaccc
acacttataaaaggtgtacctggtgaccggggaatggatggcattccaggccccaaggga
gagagaggaaccaaaggcagtcctggcccacctggtgcagaaggtgcatcatttgatgat
gtttctgagggaagaggttttcctggagaaatgggccccaaaggttttattggtgatcct
ggcttcccagctattcatcctggtcctcccggtttagatggtgaaccaggaacacctggc
ttccctggctcccctggccctccaggaagtccaggctattccgttggactgaagggatat
tcaggagttcaaggtcctgcaggccagcaaggttatccaggtccacgagggcaaaaagga
ctgaaaggtgatacaggagattgcatatgtgttgaaggaagaaggggtcctgcaggacaa
cctggtcctccaggatttcaaggtccaataggatatgctggagggaaaggagaattagga
gatcaaggctaccatggacttccgggctttcctggtagaaagggattccctggtgaatct
gggccacctggaccaaaggggataaaaggggattcccaatacgttaccacaaaaggtgcc
aaaggagacccaggaactccaggatttcctggaagtcaaggagaagatggtttaccaggc
aggaatggcatagatggtttaccagggtttcctggtcttcggggtgatggcataagagga
gaacaaggggaacctggtggtgcaggccagccaggcccaaaaggttttcctggtgaaact
ggtctgcctggtgtgggtttgcccagtccaaagggacatcgtggtcctacaggtgaccct
ggcacttatggaaaccctggctttcaaggccctcctggccccccaggcactcctgctcag
acagaatgtgggcaaacagaggaccgctttcttagagataatagaacagaatcaattcat
tcagggaccagctgtgttacggccccaaaaggagctccggggtacccaggactgcctgga
ctaccaggtgcaaaaggtacaaaagggattcctggtgaatttggtttgaatggatctcaa
ggactgaaaggacttcaaggggatcaaggtcgtggaggtgcagcaggtccagcaggattc
actggacccagaggaagcagaggtgccccaggaatgcctggggaaaggggacttctagga
aatcctggtttgccaggtttgccaggcctccttggtgaaaaggggcttacaggtgatgtt
ctaggagcaccatcaggctctcctggggaccctgggccacctggattcccaggaacaaaa
ggctcgcaaggagatcaaggtttaccaggaattaaaggaagagacggcttccctggttca
cctggatccaaagggaatccagggtttcctgggcccactggactaaccggtatccgagga
ccaccagcaacatttggattccctgggctcccaggccagcaagggtccctgggtaaaaaa
ggctcacaaggatttgttggatcccctggtgtcagaggagaaccaggggaagcagggaaa
gttggtcctgtagggatgaaaggtctgccaggggacaaaggtgaaccgggctttattgga
actaaaggaaaggctggggaaactggtcaccatggaattgttggaatgcctggtttccca
ggtcttaaaggttctaaaggatctcctggcattggaggtttcagtggtgctatggggttc
aaaggatggccaggacagaaaggaatccatggagaaaaaggcctccctggcacacaaggt
gctaaaggaccatctggggaattcggattaaaaggtgaacgtggaattcgtggtctacca
ggagcacctcctaaaatcacgccaaacgtaatgctggaagtgaaaggtgaaaaaggaaat
aaaggagtatttggtgttaaagggaatatcggtttaaaaggacatgaaggattgctcgga
ttacctggtcagacaggaatatcaggtttacctggatttcctggttttgaaaaaggtcag
aaaggcgacactggaattaaaggaataagaggtgttccaggatatactggtatcccaggt
tctcgtggtattcctggcttccctggaatcactggatggaggggagaaaaaggtgttcca
ggagttccaggtgtgattggtgaaagtggccaactgggggaaattggtgacagaggggat
actatgaatttgccaggaagtaaaggttctaaaggaattcctggaatagctggaccagca
gggttgaaaggcaacagaggaaagaagggtgaagctgggggtcaaggatatgctggtgtg
gaaggcatggaaggccctcaaggatcccaggggttaataggacaaagaggattcccaggg
aaatttggagaacaaggtgcatctggagatccaggtattcctggatcttctggtgacaaa
ggaaatgttggaaatattggtcttccaggaagaaaaggtgtgcatgggctcagaggactt
cctggattagatggtttgccaggttctaaaggtttgtcaggatcaccaggtccagatgga
tatggcatatcaggttttctaggtgttttgggtgagaagggtacagcaggagacccaagc
cccattcaaggcagcagaggacctcctggtcagaaggggcaaagaggggatccaggatgg
cgaggttcagctggtgctcctggaccagatggaagacaaggatttcctggagtctccaat
atatctggtatacctggcgatgtgggttcacctggttttgatggagtaccaggttacccc
ggacctccagggactccaggcacagctggctcatttgccttcaaaggagaagagggatcg
ataggtgtagctggagaagatggtctaaaaggaataagaggagacccgggcccagatgga
agacctggaatatcaggcttggctggagcaaaaggatataagggtgaacaaggagtcatg
ggctttgttggccaaacaggaatttctggagactttggtcccataggacctaaaggagat
agaggcccccctggtttccagggacctccaggttcccccggattgccacctttacttcct
aaactggttgctgagcaagggacaccaggcgcccatggaaaaataggcccccagggccct
gcaggtgaaatgggtcctcatggtcccccaggagatccaggttttagaggcccaataggt
aaaccaggagcacaaggaggaggaggtatagctgcatctccaggcttcagaggtgatcaa
ggaggacaaggactgcacggcccagcaggctttgaaggtacagcaggtgttcctggtact
cctggactgcaaggtatgccaggccgcagtgttaacataggctatcttcttgtgaagcac
agccaatctactcaagagccaatgtgtccagagggcatgaaccaactttggagcggctac
agtttattatactttgaaggacaagacaaagcgcataaccaggatctcggcctggctggg
tcatgtttggctcgattcagcactatgcctttcctttactgcaatccaggggatgtctgc
tattatgcaagtcgtaatgataaatcctactggctgtcaaccacagcctctcttccaatg
atgcctgtggcagaagaagaaatcagaccttacatcagtcgctgttctgtctgtgaagct
cctgctcttgccattgctattcacagtcaagatattactattcctcactgtcctgaagga
tggcgcagtttatggattgggtattctttccttatgcacactggagctggtgctgaagga
ggagggcagtcactggtttctccaggtagctgcctggaagacttcagagccacaccattc
attgaatgcaatggtgctcgggggacctgtcactactttgcaaacaaatacagtttttgg
cttaccaccattgaccatcaatttcaacactcaccttcttcagatactctcaaggctgga
ctcatccgaacacatataagcagatgccaagtgtgtatgaaaaatttgtaa
DBGET
integrated database retrieval system
