Pantherophis guttatus (corn snake): 117671535
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Entry
117671535 CDS
T07329
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117671535 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117671535 (MSH2)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117671535 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
HTH_RNase_II
MCU
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
117671535
NCBI-ProteinID:
XP_034283336
UniProt:
A0A6P9CUZ4
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MAASIDACVSAPREGCWPEGSGAESGFIRAVLALPDKPNTTVRFFERGDYYTVHGEDAKL
AAAEVFKTQAIIRILGSGTQKLESVALSRMNFEYFARNLLLIRQYRAEVYKNKAGNKSTK
ETEWYLAYKGSPGNLVQFEDVLFSNHDMSSSAGVVAIKLSSIDGQKVVGVGYVDSLARKL
EVSEFADNDQFSNLEALLIQMGPKECLLPVGETAGDMVKLRQVVQRGGILITDRKKTEFS
TKDAVQDLNRLLQSGKKDRVSSAALPEMDKQVAISSLSVVIKYLELLNDESNFGQFELTT
FDLNQYMTLDHAAVRALNLFQDSSEFTQGTHSLAGLLNKCRTPQGQRLVNQWIKQPLMDK
NKIEERLDMVEAFMEDGELRQILQEDLLRRFPDFNRIGKKFQKKATLQDCYKMYQAINQL
PNVIQALEKNNGNCNMLLDAIFTKPLKELNCDFSNFQKMIDETLDMNTVESHEYLVKPSI
DPNLAELRKSMDKLEEKMQGVLKIAAKELSLEPGKSIKLECNAQFGHFFRITYREEKVLR
NNAKYKILETQKNGVKFSNSALKDINEDYMKNRKEYEEMQDAVVKEIINVASGYKEPIQI
LNDVIAQLDAVVSFAHASNAAPIPYVRPVILEKGQGRIILKASRHPCIEVQDDVAFIPND
VTFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTVVDCILARVGA
GDSQLKGVSTFMAEMLETSSILRTATEHSLIIIDELGRGTSTYDGFGLAWAISEYIASKM
KAFAMFATHFHELTALADQIPTVNNLHVTALTTKETLTMLYRVKKGACDQSFGIHVAELA
AFPKHVIECAKAKALELEDFQNIGKSQEADEEPAAKRCYREKQEGEQIIQDFLSQVKAMP
LTEMSEEEIRTKLKELKDYVLKKNNPFVNGIISRINGTS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatagacgcttgtgtttctgctccacgggagggatgctggcccgaaggc
tcgggtgccgaaagcggctttattcgcgccgtcttggcgttgcctgacaaaccgaatact
actgtgaggttctttgagcgcggcgactactacacggtgcatggcgaagatgcaaagctg
gcggcggcggaggtcttcaaaacacaagcgatcattcggatcctgggctcaggaactcag
aaactcgagagtgttgcactcagcaggatgaattttgaatattttgcgcgaaatcttctt
ctgattcgtcagtacagggctgaggtatacaagaacaaggcaggaaataaatctaccaaa
gagactgagtggtatttggcctataagggctctccaggtaaccttgttcaatttgaggat
gttctttttagtaaccatgatatgtcctcttcagctggtgttgtagccattaagctgtcc
tcaattgatggacagaaagttgttggcgtaggatatgtggattcactggcaagaaaacta
gaagtatctgaatttgcagataatgatcagttttccaaccttgaagcactgttgatacaa
atggggccaaaggaatgtttgctgccagttggggagactgctggagatatggtgaaactg
aggcaggtggttcaaaggggaggaatcctgatcacggataggaaaaagactgaattttca
acaaaagatgctgttcaagatctcaaccgtttgctacaatcaggaaagaaggaccgtgtg
tctagtgcagcattaccggaaatggataagcaggttgccatctcttctctgtctgtagtg
attaaatacttagagctgttaaacgacgagtctaactttggacaatttgaacttaccaca
tttgaccttaatcagtatatgaccctggatcatgctgctgttagagcccttaaccttttt
caggattcttcagaatttacccaaggaacacattcactggctggattgttaaataaatgc
agaacacctcaaggacaaaggctagtcaaccagtggatcaaacaaccattgatggataag
aacaaaatagaagaaaggttagatatggtggaggccttcatggaagatggagaactaaga
caaattcttcaagaagatctcctccgccgcttcccagacttcaatcggataggaaaaaaa
tttcagaagaaagctactctacaggactgttacaaaatgtatcaggcaattaatcagcta
cctaatgtgatacaggcactggaaaaaaataatggaaactgcaatatgctactagatgcg
atattcacgaaacctcttaaagagctaaattgtgatttctccaatttccaaaagatgatc
gatgaaactttggacatgaatacggtggaaagtcacgaataccttgtcaaaccttctatt
gaccccaatcttgctgaattgagaaaaagtatggataaactggaagaaaaaatgcagggt
gtcctgaaaattgcagccaaggaattaagtttggaacctggcaagagtatcaaattagaa
tgcaatgcacagtttggacattttttcagaattacctacagagaagagaaggttctacgg
aataatgcgaaatataagatcttggaaacccagaaaaatggggtgaaattctctaacagt
gcattgaaagatattaatgaagactatatgaagaacagaaaagaatatgaagaaatgcaa
gatgctgtagttaaagaaataatcaatgttgcatcagggtataaagaacccattcaaatt
ctcaatgatgtcattgcccagctagatgccgttgtcagttttgctcatgcatcaaatgca
gcaccaataccatatgtgcgcccagttattctagaaaaagggcaagggagaattatcttg
aaagcttccaggcacccttgcattgaagttcaagatgatgttgccttcatcccaaatgat
gttacttttgaaaaggacaaacagatgttccacatcattactgggccaaacatgggagga
aaatcaacttatatacggcagactggggtgattgttcttatggcccaaattggatgtttt
gtgccgtgtgactctgcagaagtgactgtcgttgattgcatcctggctcgagttggagct
ggagatagtcaactgaaaggggtatctaccttcatggcagaaatgctggagacttcctcc
atccttaggactgcaactgagcattctttgataatcattgatgagttagggagaggaaca
tcaacatatgatggatttggattggcttgggcgatttctgaatatattgccagcaaaatg
aaagcttttgctatgtttgctactcattttcatgaattgacagcactggctgatcaaata
cccactgtaaataacttgcatgttacagcattaaccacaaaggaaacactgacaatgttg
taccgtgtgaaaaaaggggcctgtgaccagagttttggtatccatgtagcagaattagct
gcctttcccaaacatgtgattgaatgtgccaaggccaaagccctggaactggaggacttc
cagaacattggaaaatctcaggaggcggatgaagaaccagctgccaaaagatgctacagg
gagaagcaggagggtgaacaaataattcaagatttcctttctcaagtgaaagcaatgccg
ttgacagaaatgtctgaagaagaaatccggaccaaactaaaggagttaaaggactacgtt
ttgaagaaaaataatccttttgtaaatggaatcatttcccgcatcaacggtacctcatga
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