Pantherophis guttatus (corn snake): 117672112
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Entry
117672112 CDS
T07329
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117672112 (SCAF8)
03041 Spliceosome [BR:
pgut03041
]
117672112 (SCAF8)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117672112 (SCAF8)
Spliceosome [BR:
pgut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117672112 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117672112
NCBI-ProteinID:
XP_034284482
UniProt:
A0A6P9CMJ2
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPGTTATLSNNTPGTPVTPATPANVIQSLPDPWV
SQITNTDTLAAVAQILQSPQGQQLQQLIQTLQMQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAATNTLNPLEQSVSFNKKLIDRFGDFGEEADLNEESKKETPTSQLPLVSESVNNS
LFHQLAEQLQQQNLEHLRQQLLDQQPPKVSPEETQEENFGSEHSASPSQDSSHQQFLEVE
TKLDNSMDVQQQDMDIDEAQEIIEQEVFEQEEKKPAVLSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLDGFAEGGMIDQETVNSEW
ETIRTSETVKENVQITQSATVDKTTVVTTQTETYTQSVAMLQIPVAPTVPAVNLVPPAFP
VTMSVPPPGYSGIPPPPFLRASFNPSQPPPGFMPPPVPPPGPPPVVPTSLVQPSLTIAQE
SMKDFSSLGLPGGTVSSSLTTPTLSAGSVFSSLSKNSSELDEKGSLRADLQTSSTENRTV
QDDVSSSSGLNEGVQPSGITTSSGHVGGIQPPHVSSSAGLVQPVSVSSSSGLLTRVQPPT
ASNSSGLMTGSSVSSSSGLLTGLQPINVSCSSSLLMGIQPPIVSNNTGRLSGIQPPIVSS
SSGLLTALQPPIVSNNSAILGLPPPIVSSSSGLLGLPPPNISGGSGLLGLQPPTGIQNLP
HLTLASQRLPGIPLVEIRSGLIPQPPGPRFPLLQHGMPPQRTVPPPAILDPSLPPPRVPF
LPGDIFTQTERSFATSSRQNMDISNPDKRLPVGEDSIQQEGDRDYRFPPMESRDRTSSVD
IRDSIGRPPLDPREGLGRPPLDGREHLMRPHIDLRDNFGRPGMDNLRRDHFAFNSEKHWG
QRGDYDEREHQTFPVYGGLKGFQDFRERYRQTNYRFETRSGPTWNRGLEQDAHRDFDDRR
RPWERQRDRDDRDFNFGREINGNRFGRERTQNNWIPPPHPRAFEYFEGGASQQKVDSVPQ
VNGENTETENQPSAVEVQDELELYEKLASSNETKKEKSDTEAELENEPVVESTETEGT
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcttttaacagcgagctttactcactgaatgattacaagcctcct
atttcaaaggctaaaatgacccagattactaaggcagcaatcaaggccataaagttctac
aaacatgttgtacagagtgttgagaaattcattcaaaagtgtaaaccagaatacaaggtg
cctggattatatgtcattgactcgattgtacggcagtctcggcatcagtttggacaagaa
aaggatgtgtttgctcctcggtttagcaataacatcattagcactttccagaatttatat
cgttgccctggggatgataagagtaaaattgttagagtgctcaatttgtggcagaagaat
aatgtgttcaaaagtgaaattatccagcctctactggatatggcagcaggaattcctcct
ccggttgtgactccagttttaccagggacaactgctactttgagtaataatacaccagga
actccagtaactcctgctactccagccaatgtaatccaaagtttacctgatccatgggta
tctcagataactaatacagatacacttgctgctgtagcacagatcctgcagagtccacaa
ggccaacagcttcagcagttaatacagacattgcagatgcaacaacaaaagccacaacca
tcattgcttcaagcactggatgctggtctcgttgttcagctacaggctctcactgctcaa
cttacagctgccgccgctgccaccaatacactcaatccactagaacagagtgtctctttt
aacaagaagctgatagataggtttggagattttggagaagaagcagatttgaatgaagag
tccaaaaaggaaactccaacttctcaattgcccctggtatctgaatccgtgaacaactca
ctctttcatcagctagctgaacaactacaacaacaaaacttagaacatcttcggcaacag
cttctagatcagcagccaccaaaggtaagccctgaagaaactcaagaagaaaattttggt
tctgagcattcagcatcaccttcacaagacagcagtcaccaacagtttttagaagtggaa
acaaagcttgacaattcaatggatgttcaacaacaggacatggatatagatgaagcccag
gagattatagaacaagaagtctttgagcaagaagaaaagaaaccagcagttctttcaaga
tcacgaacacgctcaagatcacgttcaaggtcaccaagaaaaagaaggtcaagatcacgg
tctggttctcgaaagcgtaaacacagaaagcgctcacgttctagatcaagagaaagaaag
aggaagtcatcaaggtcatactcaagtgaaagaagagctagagaaagggaaaaagaaaga
cagaaaaaaggattacctcctgttcgatcaaaaacactaagtgtctgcagtaccacgctt
tgggttggtcaagtggacaagaaagccacacagcaagatttaaccaatttatttgaagaa
tttggacaaatagaatctataaatatgatccctcccagaggttgtgcatatgtctgtatg
gttcataggcaagatgcttatcgtgctcttcagaaactaagctctggatcctacaaaatt
ggatctaaaattattaagattgcatgggctttaaacaaaggggtgaaaactgaatacaaa
cagttttgggatgtggatcttggagtatcatatataccctgggaaaaagttaagctggat
gatttagatggctttgcagaaggaggcatgattgaccaggaaacagtaaatagtgaatgg
gaaactataagaacttcagagactgtaaaagagaatgtgcagataacccagagtgcaacc
gttgacaaaaccacagttgtcacaacacagacagaaacttacacacagtctgtcgctatg
ttacagattcctgtagctccaactgtgccagctgtcaatttagttccacctgcgtttcct
gttacaatgtctgtccctccacctggttacagtggaattcctccgcctccattcctgaga
gcaagctttaatccttcacaaccacctcctggtttcatgcctccacctgttccaccacct
ggtccaccaccagtagttccaacatctcttgtacagccgtcgctgactattgctcaagaa
tcaatgaaagattttagcagccttggtctaccaggtggtactgtttctagtagtcttaca
acaccaacattatctgccggaagtgtcttttcttctctttcaaagaacagttcagaatta
gatgaaaaaggatctcttcgtgctgatcttcagacctcttctaccgaaaacagaactgtt
caagatgacgtttcaagcagttctggacttaacgagggagtacagccatctggtatcaca
accagttctgggcatgtagggggaatccagccaccccatgtctcaagtagtgctggactt
gtgcagccggtcagtgtctcaagcagctctggacttttgacaagagttcaaccacccact
gcttcaaatagttccggtcttatgacaggttcaagtgtctcaagtagctctgggcttttg
acaggacttcagcccataaatgtttcatgcagctccagccttttaatgggaatccaacca
cccatagtctcaaataatactggacgtttgtcaggaatccagccacccattgtatcaagt
agttctgggcttttgacagcactccagccacccattgtatcaaacaattctgcaatttta
ggattgccaccaccaatagtttcaagtagttctggactgttaggattaccaccaccaaat
atttcaggtggttctggactattaggactacaaccacccactggaattcaaaatttaccc
catttaactcttgctagtcaacggttgcctggaattcctctagtagaaatccgatcagga
ttaataccacaaccacctggtcctaggtttccactactgcaacatgggatgccaccacaa
cgtacagttcctcctccagctatacttgatccatcccttcctccacctagagttcctttc
cttccaggagatatttttactcaaacagagaggtcatttgcaacttccagtaggcaaaat
atggatatttctaacccagataaaagattgcctgttggggaagatagcattcaacaagaa
ggagatagagactatcgattccctccaatggaaagtagagatcgaacatcttcagtagat
ataagggattctattggaaggccaccactagatccaagagaaggtctaggtcgacctcct
ctagatggaagagaacatcttatgaggccacatatagatttacgggacaactttggaagg
ccaggtatggataatctaagaagagaccattttgctttcaactcagaaaaacactggggt
caaagaggagattatgatgaaagagaacatcagacctttcctgtatatggtggtctcaag
gggttccaggattttcgagagagatatcggcaaacaaactacagatttgaaactcgaagt
ggtcctacctggaacagaggacttgaacaagatgcccacagagactttgatgaccgtcgt
agaccatgggaaagacaaagggacagggatgatagagattttaattttggtagagaaatt
aatggaaacagatttgggagagagagaacacagaacaactggataccccctccacatcca
agagcgtttgaatattttgaaggtggtgcttctcaacaaaaagttgatagtgtaccacaa
gttaacggtgaaaacacagaaacagagaatcagccatctgctgtggaagtgcaggatgaa
ttggaactttatgaaaagttggcgtcttcaaatgagacaaaaaaagagaagagtgacaca
gaagctgaattagaaaatgaaccagtggtagaaagcacagaaactgaggggacataa
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