Pantherophis guttatus (corn snake): 117672845
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Entry
117672845 CDS
T07329
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117672845 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgut04121
]
117672845 (TRIM55)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117672845 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
Rhabdo_ncap
GP67
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117672845
NCBI-ProteinID:
XP_034285756
UniProt:
A0A6P9D0S5
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSATLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPIRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPERKTE
QPMCEEHEDEKINIYCLNCEVPTCSMCKVFGAHKDCQVAPLSNVYQRQKSELSDGIAVLV
GSNDRVQGIVTQLEETCRTVEECCKRQKEQLCEKFDYLYAILEERKSEMTQIITRSQEEK
LEHVRSLIKKHADHLEIVSKLVESGIQFMEEPEMALFLQNAKALLQKITEASKAFQMEKI
EKGYENMTHFTVNLNREEKIIREIYFYREEEEEEEEDATEGKTPDEIHTESSGEEDEISE
QASSQQLQQDIALKDTQAVSQSNLAPSLPSNPLVNTPTTAKQDEIVHTTTAQPAGLVETG
LQSNGESSDPLFYPSWYKASPRQTSNSNPAPLTESRQVGPSIPVEVNVKKTEAPEAASAN
TSSAVCGKEVNPSTDTSQTGSETLQGHVEGQPGSNERVDEPARHVFSFSWLNSLNE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccactctgaattataagtctttttctaaagagcagcaaactatggataacttg
gagaaacagcttatttgtcccatctgtttggaaatgtttactaagccagtggttatcctt
ccatgtcagcacaacctctgtagaaaatgtgccagcgatatcttccaggcctccaatcca
tatcttccaatcagaggaggtaccactgtggcttcaggaggtcgatttcgctgcccctcc
tgtagacatgaagtagttcttgataggcatggagtgtatggccttcaaagaaatctgctg
gtggaaaatataattgatatatacaaacaggaatcttccaggcctgaaagaaaaactgag
cagccaatgtgtgaagaacatgaagatgagaaaattaatatttattgcctgaattgtgaa
gtgcccacctgttccatgtgcaaagtttttggtgctcataaagactgtcaggttgctccc
ctctcgaatgtgtaccaaaggcagaagtctgaacttagtgatgggatcgctgtgctcgtg
ggaagtaatgacagagtacaaggaattgtaactcagctggaggaaacctgcagaacagtt
gaagaatgctgcaaaaggcagaaggagcaactatgtgaaaaatttgattatttgtatgca
atattggaagaacgaaaaagtgagatgacacaaataatcactcggagccaagaggagaaa
ttggaacatgtccggtctctgataaaaaagcatgcagatcatttagagatagtatcaaaa
ctggtggaatcaggcatccaatttatggaagagccagaaatggctctatttttacagaat
gccaaagcattgctacaaaaaattactgaagcttctaaagcatttcagatggaaaaaata
gagaaaggctatgaaaatatgacccacttcacagtcaatcttaatagagaagaaaagata
attagagaaatttacttttacagagaagaagaggaggaggaggaggaagatgctacagaa
gggaaaacaccagatgaaatccatactgaatcatcaggtgaagaagatgaaatatctgaa
caagcatcatctcagcaacttcaacaggatattgcattgaaagacacacaagcagtatct
cagagtaatctggcaccatcattaccttctaacccattagttaatactcctaccacagca
aaacaggatgaaattgtacatactactacagcacagcctgcaggactagtagagactgga
ctacagtcaaatggagagtcatccgatcccttgttctaccctagttggtataaagcatca
ccacgacaaacaagcaattcaaatccagctccattgaccgagagtaggcaggtagggcct
tccattcctgtagaagtgaatgtcaagaagacagaggctccagaagcagcttctgcaaat
acaagttctgctgtgtgtggtaaggaagttaacccatctacagatacttcacagactggg
tctgagaccttacaaggacatgtggaaggacagcctgggagcaatgaaagagttgatgag
ccagctcgtcatgttttctctttctcctggttgaactcattgaatgaatga
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