Pantherophis guttatus (corn snake): 117672882
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Entry
117672882 CDS
T07329
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgut04040
]
117672882 (TRPA1)
Ion channels [BR:
pgut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117672882 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117672882
NCBI-ProteinID:
XP_034285857
UniProt:
A0A6P9CS01
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MKRSILKWFQSRDQKQYPSSYEGVVCEADACSVASQDVFKVISDGSTCRLRSFIKKNREG
LKKLDKLNATPLHHAAGKGQLELMQMIMDDSSFEALNVTDSSGNTPLHWATKKQQTESVK
LLLSRGANPNILNSNMVSPLHWAVQYLCNDLVKIFLECSITDVNLEGEGGNTPILVACYK
DNSEALKLLIENGGDIAKANNMGCMPVHAAAFSGSKLCLEIIIKRGVELGYSPENHINFT
NNGKCSPLHLAVQSRDLEMIKMCIEYGAQIDLKQNDNCTALHFAATQGATEILKLMMSSY
TGEESIINALDGNKETLLHRAALFDHYELAEYLISKGANINSVDIEGRTPLLLATSCASW
KIVNLLLSKGANVELKDLLGHNFLHLTVLQPGGLQHLNEDFLKMKHIRDLITEEDQEGCT
PLHYACKQGVPLSVNILLEMNVSVYAKSRDKKSPLHFAASYGRINTCLRLLEAMEDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKKGALFLCDYKGWTALHHAAFGGYTRTMQIILN
TNMKATDKVNDEGNTALHLAAREGHAKAVKLLLDDNAKILLNSAEASFLHEAIHNGRKDV
VNAVILHKRWEESITTFSHYSSINKCAILEMVEYLPECLKLVLDNCIIESPDEKGSKDFC
IEYNFRYLQCPLKLKKKFKENEGIIYEPLLALNGMVRHNRVELLSHPVCTEYLLMKWMAY
GFRAHILNLAVYSLGLIPLTLLVTHLEPDVCFNATLKYGPFDNKDSNFIKVCMSLVFIMS
LFGICKEIIQLFQQKLNYLLDYSNLLDWTIYTTSIIFVSSLFVMLPIRLQWDCGAIAILL
AWTNFLLYLQRFENYGIYIVMFWEILRTLIRIVIVFFFLMLAFGLSFYVLLGSQQTYGTP
YLSVMQTFSMMIGDNNYREAFLEPMLADKLPFPFLSFIILIIFSMLIPILLMNLLIGLAV
GDIAEVQKFAAMKRIAMQVNLHTNLEKKLPYWFLSRVDQESIVVYPNKPRYCGFMTVFQY
CFGWDNTAADTQSADTTLELEVLKQKYRLKDIATLVEKQHNLLKLVAQKMEIMSEAEDED
PNDLFQNKFRKEQLEHKNSKWDTVLKAVKSKCA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctcgatcctgaagtggtttcagagccgcgaccaaaagcagtacccctcttcc
tacgaaggggtggtgtgcgaagccgacgcttgttcagtggcctcgcaggatgtctttaag
gtgatctcagatggaagtacttgcagacttcgaagtttcattaaaaaaaatcgtgaagga
cttaagaaactggataagctgaatgctacaccattgcaccatgctgcaggaaaaggtcaa
cttgagttaatgcaaatgatcatggatgattcttcatttgaagctctaaacgtaacagac
tcgtctggaaatacaccactgcactgggctacaaaaaaacaacagactgaaagtgttaaa
ttacttctcagcagaggggccaacccaaacatccttaattccaatatggtttctccactt
cactgggccgtgcagtatctttgcaatgatttagttaagattttccttgaatgcagcatt
acggatgtaaatctggaaggagagggtgggaatacgcctatattagtagcatgttacaaa
gataattctgaagcactgaaacttctgattgaaaatggcggtgacattgctaaagcgaac
aatatgggctgtatgccagtccatgcagctgccttttctggttcgaaattatgtttggag
attattataaagcgaggtgtagaacttgggtattcacctgaaaatcatattaattttact
aataatgggaaatgtagtcctcttcatctagcagtccaaagcagagacttggaaatgatt
aaaatgtgcattgaatatggagcacagattgatctgaaacagaatgacaactgcacagct
cttcattttgctgctacccaaggagctactgaaattctcaagttaatgatgtcatcttat
acaggagaggaatccatcattaatgcattagatggaaataaggaaacattgctccatagg
gctgcattgtttgatcactatgaactggcagaatatctcatttcaaagggagcaaatatt
aatagtgttgacattgagggtcgaacaccattactccttgcaacttcctgtgcatcatgg
aaaattgtgaatctgttactttcaaaaggagcaaatgtagaattaaaagatctccttggg
cataattttttacatctaactgtcctacaacctggagggttacagcatctgaatgaagat
tttttgaagatgaaacatattcgcgatcttataactgaggaggatcaggaaggatgcact
cctttacattatgcatgcaaacaaggcgtacccctttctgtgaatatccttcttgaaatg
aatgtttctgtatacgctaagagcagagacaagaaatctccattacattttgcagctagc
tatggacgaatcaacacgtgtcttcgacttctggaggctatggaagataccagactgttg
aatgaaggagacaagaaggggatgacacctttacatctggctgctcaaaatggacatgag
aaggtagtccagtttctcctaaagaaaggtgccctctttctttgtgactataaaggctgg
acagctttgcatcatgcggcttttggtggatatactcgtacaatgcaaattattttgaac
acaaatatgaaagccactgataaagtaaatgacgaagggaatacagctcttcatcttgct
gccagagaaggccacgcaaaagcagtgaaattacttcttgatgacaatgccaaaattctc
ctgaacagcgctgaagcttctttccttcatgaagccatacacaatggccgaaaagatgtt
gtaaatgctgtcattttacataaaagatgggaagaatctataacaacattttctcactat
tcttctataaacaaatgtgcaatactagagatggttgaatatcttcccgaatgtttaaaa
ttggttttagacaattgcattattgaatcacctgatgaaaaaggatctaaagacttctgt
attgaatataacttcagatatcttcagtgtccactgaaacttaagaagaaatttaaagag
aatgagggaataatttatgagccgcttcttgctttaaatggcatggtacgtcacaaccgt
gttgaactgcttagtcatcctgtttgtacagaatatttacttatgaaatggatggcctat
ggtttccgagcacatattttgaatctggctgtgtattcccttggcttaatacctcttacc
ctcctggtcacccatttagagccagatgtttgtttcaatgcaacacttaaatatggacct
tttgataataaggattcaaacttcattaaagtttgtatgtctttagtttttatcatgagt
ttatttggtatctgcaaagaaataatacaactattccaacagaaattaaactacttgttg
gattattctaatcttcttgactggacaatttatactacaagtatcattttcgtgtcatct
ttatttgtgatgttaccaattcgtttacagtgggactgtggtgcaattgctatactcttg
gcttggacaaacttcttgctctatttacaaagatttgaaaattatggaatatatattgtg
atgttttgggaaattttgaggactctgatacggatcgttattgttttcttttttttgatg
ttagcatttgggctcagcttctatgttcttcttggttcacagcaaacatatggcactcca
tatctttcagtaatgcaaacattttccatgatgataggagataacaactaccgtgaggct
ttccttgaaccaatgctcgctgataaactcccttttccattcctgagttttataattctc
attatcttttctatgcttattccgattcttcttatgaacttgctgattggtttggctgtt
ggtgacattgcagaggtgcaaaagttcgctgcaatgaaaagaatagcaatgcaggttaat
cttcatacaaacctggaaaaaaaactaccatattggtttctcagtagagttgatcaagaa
tccattgttgtgtatcctaataaacctagatattgtggctttatgactgtgttccagtat
tgctttggatgggataatacagcagctgatacacagagtgctgatacaacattagaacta
gaagtattgaaacagaagtacaggcttaaggacattgcaactctggtggaaaaacagcac
aatctccttaaactagttgcacaaaagatggaaataatgtctgaggcagaggatgaagat
ccaaatgatttattccagaacaaatttaggaaagagcagttggaacataagaacagtaaa
tgggatacagtgctcaaagcagtgaaatcgaaatgtgcttaa
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integrated database retrieval system
