Pantherophis guttatus (corn snake): 117673257
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Entry
117673257 CDS
T07329
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117673257 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117673257 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117673257 (SMARCC1)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117673257 (SMARCC1)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117673257 (SMARCC1)
PBAF complex
117673257 (SMARCC1)
GBAF(ncBAF) complex
117673257 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117673257
NCBI-ProteinID:
XP_034286422
UniProt:
A0A6P9CTE2
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MAAASATAASSPVSGPGTVVGGSGPGSASSSSSSSSSFSSAGPLSLSRRKDGGPAGKFWE
SADTASQLEATRAWLAKHYKKYVQADAPTNKTLAGLVSQLLQFQEDAFGKHVANPAFTKF
PAKCFLDFKAGGTLCYILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNY
LSRPSIYLIPDIELKVANKLKDIVKRHQGTITDDKSKATHHIYPVPTSLDEDEWLRPVMR
KDKQVLVHWGYYPDSYDTWVHASEVEAEIEEPPIPEKPWKVYARWILDMDIFNEWMNEED
YEVDENKKPVSFRQRIYLRNEEPVRSPERRDRKAAAGTRKRKASPSPPPPPTPVESRKKV
GKKGQASLYGKRRGQKEEEEQDDLTKDMEDPIPVPNVEEVALPKNVNPKKDSENTPVKGG
TVADLDEQDEETMTAGAKEDEDPNKGDQGRSLDTGEDNVTEQTNHIIIPSYASWFDYNCI
HVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVM
RVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHLRTAQIPSSQQML
NFPEKNKEKPTDLQNFGLRTDIYSKKTLAKSKSANAGREWTEQETLLLLEALEMYKDDWN
KVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLA
SVVDPRVASAAAKAALEEFSRVREEVPLELVEAHIRKVQEAARASGKVDPTYGLESSCIA
GTAPDEPEKMDGTQEDKMETDTDGAQTDKVKVESKGENEIDTNKLPEGDDERIAEKEQDS
DVSQDSKQDDKDADDNKENFDVGKEKEGSGGKRRAEHELSEGNVATAAAAALASAATKAK
HLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNF
HMEQLKYAELRARQQLEQQQQQQNQNAQQSHQHASGPGMNPLGTTLSSHQQPPPYPMMHH
QMPPPHPPQPGPILGQGSMMPGQPLPGRIMPTGTTNAPSATSTNIPPSGTGNIIGPRGQL
ASPNGLYPQPPPPPPPADGATPPPAGPIPASTAP
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcctcggcaacggcggcctcgagtcccgtgtcggggcctggaaccgtcgtc
ggaggcagcgggcccggttcggcttcttcgtcctcgtcgtcgtcgtcgtcgttttcttcc
gccggccctttgtcgctttcccgccggaaagacggaggcccagccgggaaattttgggaa
agcgccgacacggcttcgcagttggaagccacccgcgcttggctggctaagcattacaag
aagtatgtccaggctgacgcaccgaccaataagaccctggctgggctagtttcccaattg
ctgcagttccaggaagatgccttcggaaaacatgtggccaatcctgcctttaccaagttt
ccggccaagtgcttcttggatttcaaagctggaggaacgttgtgttacatcctcggtgcc
gcttacaaatacaagaacgagcaaggatggaggagatttgacttgcaaaacccttcgcgg
atggaccgaaatgtggaaatgttcatgaacattgaaaaaactttagtgcagaataactat
ctgagcagaccaagcatctacctcattccggacatcgagctgaaagtggctaacaagctc
aaagacattgtcaaacgccatcaggggaccatcacagacgacaagtcgaaagccacacat
catatataccctgttcctacctcactggatgaagatgagtggctgagaccagtgatgaga
aaagacaagcaagtcctggtgcattggggttattacccagacagctacgacacctgggtc
catgcgagtgaagtcgaagcagagatcgaagagcctccgattcctgaaaagccttggaag
gtctacgcccgatggattctggacatggacatcttcaacgaatggatgaacgaagaagac
tacgaggttgatgagaacaagaagccggtcagctttcgacaacggatctacctgagaaac
gaagagccggtccgtagccccgaacggcgagataggaaggcagctgctgggacccggaag
aggaaggcctctccttcgcccccaccacctcccaccccggtggaatccaggaagaaagtt
ggcaagaagggacaagccagcctctacgggaagcgacgtggtcagaaggaagaggaggag
caggacgatctgaccaaggacatggaggaccccataccggtgccgaatgttgaagaggtg
gcccttcccaaaaacgtcaatccgaagaaggacagcgaaaacacgccggtcaaaggaggc
actgttgcggatcttgatgaacaagacgaagagacaatgacggctggagcgaaggaagac
gaagatcccaacaaaggggaccagggacgatccctcgacactggagaagacaatgtcacc
gaacagaccaaccacatcatcatccccagctatgcctcctggttcgactacaattgcatc
catgtcatcgaacgccgggcacttcctgaattcttcaacgggaaaaacaaatccaagact
ccggaaatatacttagcataccgcaatttcatgattgacacctaccgcttgaaccctcaa
gaatatttgaccagcacggcctgccgaagaaacttgaccggcgacgtttgtgctgtcatg
agagtccacgcctttctggagcagtgggggctgatcaattaccaagtggatccggaaagc
cgacctatggccatgggacccccgcccaccccccacttcaacgtgctggcagacacccct
tcgggactcatgccgctccacctgcggaccgctcagattccatcttcccaacaaatgctg
aactttccggagaaaaacaaggaaaagcccactgatttgcagaattttggcctccgcacg
gacatctactccaagaaaaccttggccaagagcaaaagcgccaacgctggccgagaatgg
acggaacaagagactctgcttctgctcgaggcgttggagatgtacaaggacgattggaat
aaagtctccgagcacgttgggagtcgaacccaggacgagtgcatcctccattttctcagg
cttcccattgaagacccttacctggagaattcggatgcctccctcggacccttggcctac
cagcccgtcccgttcagccaatccggcaatccggtgatgagcaccgtggctttcctggcc
tcggtggtggatcctcgggtggcttcagctgccgccaaagctgctttagaggaattttcc
cgcgtccgagaagaagtccctctggagttggtggaggcccacatcaggaaggtccaagaa
gctgcccgggcttcggggaaagtggatcccacttatgggcttgagagtagctgcatcgct
ggaacagcccccgacgagccggagaaaatggatggaactcaagaggacaagatggagaca
gacacggacggcgcacaaacagacaaagttaaggtcgaaagcaaaggagagaatgaaata
gacacaaacaagttaccagaaggagacgatgagagaattgccgaaaaggagcaagatagc
gatgtgtctcaagattcgaagcaagacgataaggacgccgatgacaacaaggagaacttc
gacgtcggcaaagagaaggaaggcagtggcgggaagcggcgtgccgagcacgaactctcc
gaagggaacgtcgccacggccgcagctgccgcactggcttcagccgccaccaaagccaag
catctggccgccgtcgaggaacggaagatcaaatctctggtggctctcctggtggaaaca
cagatgaagaaactggagatcaaacttcgtcattttgaagagctggaaaccatcatggat
cgagagaaagaagcgctggagcagcaaagacagcagctgctcaccgagcgtcaaaacttc
cacatggagcagctgaaatatgccgaactccgagcccggcaacaattagaacagcagcag
caacaacagaaccagaacgcacaacaatcgcaccagcacgccagtggtccgggcatgaat
cctctggggacaaccttgtcatctcaccagcagcctcccccttatcccatgatgcatcac
cagatgcccccgcctcaccctcctcaaccaggtccaatcctcggacagggctccatgatg
cctggacagcccctgccaggccgtatcatgccaactggaaccaccaacgccccgtcggcc
accagcaccaacatccctccatctgggacaggaaacatcattgggccccggggacaactg
gcctctccaaacggcttgtatcctcagccgccgcctcctcctcctccagccgacggggca
acaccgcctcccgcaggacccatccccgcttccacagctccctga
DBGET
integrated database retrieval system
