Pantherophis guttatus (corn snake): 117673375
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Entry
117673375 CDS
T07329
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgut03009
]
117673375 (DDX56)
Enzymes [BR:
pgut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117673375 (DDX56)
Ribosome biogenesis [BR:
pgut03009
]
Eukaryotic type
Pre-60S particles
Helicases
117673375 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
117673375
NCBI-ProteinID:
XP_034286628
UniProt:
A0A6P9CQ07
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAAEGNFGQMGLDARLLQAVAELGWAAPTPIQEKAVPLALEGKDLLARARTGSGKTGAYA
LPLLQRLLDAKAAALVAEQAVRGLVLVPTKELARQALQMLRRLAAYCARDVRAVNLAGPE
DMTAQRPLLMERPDVVIGTPSRVLAHVQMQNLRLQNSLEILVIDEADLLFSFGFEEDLKN
LLCHLPKIYQTFIMSATFNEDVQTLKELVLHNPVTLRLQEAPLPDSSQLSQFQIQCETEE
DKFLLLYALLKLSLVRGKVLLFVNRIDRCYRLKLFLEQFGIAACVLNSELPAQSRCHIIS
QFNRGVYNYIIATDEQDLAEPEETGRKRKKGTKGEKGKDQEYGVSRGIDFHNVSAVFNFD
FPPSFESYIHRAGRTARVQNPGTVLTFVLPSERLLLAKIEEVLTAESASKYTLTPYQFRM
EEIEGLRYRCQDAMRSITKQAIKEARLREIKEELLNSEKLKTYFEDNPRDLNLLRHDKPL
HPAIVKPHLRNVPEYLVPQGLRPAVPALAGKRKRRKCPASTSKGQRNPLHSFKNTRKKFR
TLAKPK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggggaacttcggccagatgggcctggacgcgcggctcctgcaggcggtg
gccgagctgggctgggcggcgccgaccccgatccaggagaaagcggtgccgctggcgctg
gaggggaaggacctgctggccagggcccgcacgggctccgggaagacgggcgcctacgcc
ctgcccctactgcagcgcctgctggacgccaaggcggcagcactggtggcggagcaggca
gtgcggggcctggtgctggtgcccaccaaggagctggcccggcaggcgctgcaaatgctt
cggcgcctggccgcctactgcgctcgggacgtgcgcgccgtcaacctggccggtccagag
gacatgaccgcccagagacccctcttgatggagagaccagatgtggtgataggaacaccc
tcgcgggttttggcacatgtacagatgcaaaacttgaggctgcagaattcgttagaaatt
ttggtgatagacgaggctgacttgcttttttcatttggctttgaggaagacttgaagaat
cttctctgccatttgcccaagatctaccagaccttcatcatgtcagctaccttcaacgag
gatgtgcagacactgaaggagttggtgctgcacaacccggtgactctcaggctgcaagaa
gcaccgttgccagatagctcccagctgagtcagttccagatccagtgcgagactgaagag
gataaattcttgctcctctatgccctcctgaagctttccctggtgcggggaaaagtcctc
ctctttgtcaacaggatcgaccgctgctaccgcctcaaactcttcctggagcagtttggg
atcgctgcttgtgtcctcaactcagagctgcctgctcagtcccggtgccacatcatcagc
cagttcaatcggggcgtctacaattacatcattgccacagatgagcaggacctggcagaa
ccagaggagactggcaggaaaaggaagaagggcaccaaaggagaaaagggcaaagatcag
gaatacggggtctcccgaggcatcgacttccacaacgtgtccgcggtcttcaattttgat
ttccccccctccttcgaatcctacatccaccgagcaggcaggacagcccgtgttcagaac
ccaggcactgtcctgaccttcgtcttgccctctgagaggcttctgcttgccaagattgaa
gaggtgctcacagccgagagcgcaagcaagtacaccttgacgccctaccagttccggatg
gaggagatcgagggactccgctaccgctgccaggatgccatgcggtcgatcaccaagcag
gctattaaagaagctcgactccgtgaaatcaaagaagaattgctcaactcagagaagctc
aagacgtactttgaagacaatccccgcgatctgaatttgctgcgccatgacaagcccctt
cacccggccatcgttaagcctcacctgcgcaacgtcccagaatacttggtccctcagggt
ctccggccagcagttccagccctcgctgggaaacgcaagcggcggaaatgcccggcctcc
acgagcaagggccagcggaaccccttgcacagcttcaagaacaccaggaagaaatttcgg
accttggcaaagcccaaataa
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