Pantherophis guttatus (corn snake): 117673602
Help
Entry
117673602 CDS
T07329
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
pgut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117673602 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
117673602 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117673602 (LSM8)
03041 Spliceosome [BR:
pgut03041
]
117673602 (LSM8)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117673602 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
117673602 (LSM8)
Spliceosome [BR:
pgut03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117673602 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
117673602
NCBI-ProteinID:
XP_034286940
UniProt:
A0A6P9D5S5
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcgttggaaaactacatcaaccgtactgttgctgtgattacttcagatggt
cgaatgattgtgggcactctcaagggctttgatcagacaatcaatttgattttggatgag
agccatgaaagagtattcagttcttcacaaggagtggaacaagtagtattaggattatac
attgtgagaggagataatgtagctgtaattggagaaatagatgaagaaacagattcagcc
cttgacttgggaaatattcgagcagaacctttgaattcagttgtacattga
DBGET
integrated database retrieval system
