Pantherophis guttatus (corn snake): 117673902
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Entry
117673902 CDS
T07329
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117673902 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgut03036
]
117673902 (MBD4)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117673902 (MBD4)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117673902 (MBD4)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117673902 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
DX
Motif
Other DBs
NCBI-GeneID:
117673902
NCBI-ProteinID:
XP_034287491
UniProt:
A0A6P9D5L7
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MHGRNRMVVSVFSNRDFGIKSSYLIDYLLISGAQSCIDNRQHLEKDCLFVLQSIPLGFPK
GEKITEAVAWEKCSGLKFRSKRALLNYFKEDKDIILTTEDFNFSMAVQRNTRLRTKRSFT
RNAGTEIESCISKNPVSLPGLGNSEGDCKSSLESNLELRSDTREPEIPAIYLQDGPNMGD
ISKDCFFKSDKNCAIRRKIQVRKSKKSSQIRNITDGQNKIQSLSACKKQAQSSKHAICKN
KMCVFNSDSSENKVCRRSSRKRKICFKDELLFEPKTEQNDKQIEPFLEHQTSTEILKCTE
SSCSRITAAADKNRSEAEMQRNVMASESASEQRASTMDVTVSQMCREKPFTSTKESRTQR
TQVERRKTSPYFSRKLIKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATIFL
NKTSGKMAIPVLWEFFKKYPSPNVARTTNWKEMSELLKPLGLYELRAKTIVKFSDEYLVK
QWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHSWLRENHDKLNLNY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtaggaataggatggtggtgtccgttttctcaaatcgggattttgggattaaa
agctcttatttaatagattacctgctgatcagcggtgctcagtcttgcattgataacagg
cagcacctagaaaaagactgcctgtttgttctgcaaagtatccctctcggtttcccgaag
ggtgagaagataactgaagctgtagcatgggaaaagtgctccggactcaagttcagatct
aaacgtgctcttttgaattactttaaagaggacaaagatatcattcttacaacagaggat
tttaattttagtatggctgttcagaggaatacacggttaagaaccaaaagatcttttacc
agaaatgcaggcacagaaattgagagttgcatttctaagaatccagtttcactccctgga
ttaggaaacagtgaaggagattgtaaatcttctctagaaagtaacttggaacttcgatcc
gatactagagaaccagaaattcctgctatttatttgcaggatgggcctaatatgggagat
atttctaaggattgttttttcaaaagtgataaaaattgtgctattcgaaggaagattcaa
gttagaaaatctaaaaagtcttctcaaataaggaatatcactgatggccaaaacaaaata
cagagtctatcagcgtgtaaaaaacaggcacaaagcagtaaacatgccatatgtaagaac
aaaatgtgtgtatttaatagtgattccagtgaaaacaaagtatgccgaagaagttcaagg
aaaagaaaaatatgttttaaggatgaactattgtttgaaccaaaaacagagcagaatgat
aaacagattgaacctttcttagaacaccaaacaagcacagaaatattaaaatgtactgaa
agttcttgcagcagaatcactgcagctgctgataaaaatcgttcagaagcggaaatgcaa
agaaatgtgatggcttcagagagtgcaagtgaacagagggcttccaccatggatgttact
gtttcccagatgtgcagagagaaaccttttacatcaaccaaagagagccgtactcaaaga
acccaagtggaaagacggaaaaccagtccatatttttccagaaaattaatcaaagaagct
ccaagtccaccaagaaggaaagcttttaggaaatggactccacctcgttctccttttaat
ctggttcaggaaacactgtttcatgatccatggaaacttctgattgcaactatatttctg
aacaaaacctcaggaaagatggctatccctgtgctgtgggaattttttaagaaatatcct
tcaccaaatgtagcaagaactaccaactggaaagaaatgtcagaattgcttaaacctctt
ggcctatatgaactcagagcaaagaccattgtcaaattttcagatgaatatttggttaag
cagtggaaatatccaattgaattacatggaattggaaaatatggaaatgattcttacaga
attttctgtgtgaatgaatggaaagaggtacagccacaagaccacaaattgaacatttat
cattcctggctgcgggaaaaccatgacaaattaaatcttaattattag
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