Pantherophis guttatus (corn snake): 117674244
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Entry
117674244 CDS
T07329
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgut03041
]
117674244 (DDX1)
03016 Transfer RNA biogenesis [BR:
pgut03016
]
117674244 (DDX1)
Enzymes [BR:
pgut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117674244 (DDX1)
Spliceosome [BR:
pgut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117674244 (DDX1)
Transfer RNA biogenesis [BR:
pgut03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117674244 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
117674244
NCBI-ProteinID:
XP_034288020
UniProt:
A0A6P9D8Y6
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGNAFAIGADGLCCQSREIKEWH
GCRSTKGIIKGKYYYEVSCRDQGLCRVGWSSSQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDADKSQISFSKNGKDLGLAFEIPQHLKNQALFPACVLKNAELKF
NFGEEDFKFPPKDGFTAIDKAPEGNVMKSQHTGSAQVAQSKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVENPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLT
LSQIRFLVLDEADGLLTQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKIDKLWEKLGKNHIRTDEVHAKDNTRPGTN
SAEMWSEAIKILKGEYAIRAIKEHKMDQAIVFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKADVRFLICTDVAARGIDITGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAAEKEKVWYHSCPSRGKNCYNTRLKDEGGCTIWYNEMQLLG
EVEEHLNCTITQVEPDIKVPVDDFDGKVAYGKRKAAGGGTYKGHVDILAPTVQELATLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcagaaatgggtgttatgccagaaatcgctcaagctgtagaagaaatg
gactggcttctgcctacagatatccaagcagagtccattccattgattttgggaggaggt
gatgtactcatggctgcagaaactgggagtggaaaaactggtgcattcagcatcccagtt
attcaaattgtttatgaaacactaaaagaccaacaggaaggaaaaaagggtaaaactact
attaaaaccggtggaggagtgctgaacaaatggcaaatgaatccctatgacagaggaaat
gcatttgctattggagctgatggtctgtgctgccaaagcagggaaataaaagaatggcat
ggatgtcgatcaactaaaggcataattaaaggaaaatattattatgaagtatcctgtcgt
gatcagggtttgtgcagagttggatggtcctcttctcaagcttcattagatttgggtact
gataaatttggctttggctatggtggaaccggaaagaaatctcataataaacagtttgat
agttatggggaggaattcaccatgcacgacacaataggttgttatatagatgctgataaa
agtcaaatctcattttcaaaaaacggaaaagatcttggacttgcatttgaaattccacag
cacctaaaaaaccaggccctctttccagcttgtgtcctaaagaatgctgaattaaaattc
aactttggtgaagaggactttaagtttccacccaaagatggcttcactgccattgataaa
gctcccgagggtaatgttatgaagtcccagcacacaggaagtgcacaagtagcacagtcc
aagaatttaccaaatgctcccaaagctttgatcgtagagccatccagagagttagcagag
caaactctgaacaatgtgaaacaattcaaaaaatatgttgaaaatcctaaattaagggaa
ctcctgattattggtggtgttgctgcaagagagcagctctctgtactggagcaaggggtg
gacatagttgttggaactccaggaagactggacgatcttgtttcgactggaaaattgact
ttatctcaaattaggtttctagttcttgatgaggctgatggcctccttactcaaggttat
tcagatttcatcaaccgcattcattctcagattccccagataacttctgatgggaaaagg
ttgcaggtcatcgtgtgttctgcaactctgcattcatttgatgtaaagaagttatctgag
aagattatgcacttccccacttgggtagatttgaaaggcgaggattctgtcccagatacc
gtgcaccatgttgttgtacctgtgaaccccaaaattgacaaactctgggagaagcttggt
aaaaatcacatcagaacggatgaggtgcacgcaaaggataatacaagacctggtacaaat
tctgcagaaatgtggtcagaagcaattaagattttaaaaggagaatatgctattcgtgcc
atcaaggaacacaagatggatcaagcaatagtcttctgcagaactaaaatagattgtgac
aatatggaacaatactttatacagcaaggaggaggtccagataggaagggacatcaattc
tcatgtgtgtgccttcatggagacagaaagcctcatgagagaaaacagaatttggagcgc
tttaagaaagcagatgtcagatttttgatctgcacagatgtagcagccagaggaattgat
atcactggtgtgccttacgttatcaatgtcacacttccggatgaaaaacagaattacgtt
catcggattggcagagtgggtcgagctgaacgcatgggcctggcaatttccctggtggca
gcagagaaggaaaaagtttggtatcattcatgccccagtcgtgggaagaactgctacaat
actagactgaaggatgaaggtggttgcactatttggtacaatgagatgcagcttttaggt
gaagtagaagagcatctgaactgcaccattactcaggttgagccagatattaaagtccca
gtagatgattttgatggcaaggtcgcctatggaaaaagaaaagctgctggtggtggaacc
tacaaaggccatgtggacattctggcacccacagtgcaagagctggctacccttgaaaag
gaagcccagacatctttcttgcatcttggttacctccctaatcagctgtttagaacattt
tga
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