Pantherophis guttatus (corn snake): 117674540
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Entry
117674540 CDS
T07329
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04350
TGF-beta signaling pathway
pgut04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117674540 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117674540 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgut04515
]
117674540 (NEO1)
Cell adhesion molecules [BR:
pgut04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117674540 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
Unc5_NetrinR_N
V-set_CD47
Sp38
Herpes_UL74
EphA2_TM
Arylsulfotran_N
TM_ErbB1
TMEM154
Motif
Other DBs
NCBI-GeneID:
117674540
NCBI-ProteinID:
XP_034288458
UniProt:
A0A6P9CX02
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MAARGAWRRRLLLLGSLWVALLGGQRPDSSAAAAAAAPPQQHLSPAEPTVRTSTPFYFLV
EPVDTLSVRASSVVLNCSAYCESPPKIEWRKDGTFLNLVSDDRRQLLPDGSLLINSIVHS
KHNKPDEGHYQCVATVESLGTIVSRTAKLTVAGLPRFITQPESASVHRGNPIVLNCEVNA
DLAPFVRWELDHQPLFLDDRVLKLPSGTLIVSNATDEDAGTYCCVIEIGGSPKYSDEAEI
KVLPESDLSSGLLFLKQPFPLTKVTGQSAVLPCVASGIPVPLIRWTRKEEELVTENSHKF
LFLSGGTLKINDITEDDSGTYTCIADNGNETIEARADLTVQVPPTFLKQPANIYAHESMD
IVFECCVSGKPTPTVKWVKNGDVVIPSDYFKIVNEHNLQVLGLVKSDEGFYQCIAENDVG
NIQSGAQLIILDHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKL
TWRTPASDPQGDNLTYSVFYTKEMSNRERVENTSHPGEMQVTIQNLMPETVYIFRVVAQN
RHGPGESSVPLKVATQPEVQLPGPAPNIRAYATSPTSITVTWGTPLSGNGEIQNYKLYYM
EKGTENEQDIDVGGLSYTIIGLRKYTEYSFRVVAYNKHGPGVSTQDVVIRTLSDVPSAAP
QNLTLEVQNSKNIMMHWQPPPTGTHNGQITGYKIRYRKMIRKSDVTEIIVGTQLSQLIEG
LERGTEYSFRVAALTVNGTGIATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSW
TPPENQNIVVRGYAIGYGVGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAYNNVGEG
IPLYESAVTRAYTDTSEVDLFVVNAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNS
LPKNQKVSDARYYTVRWKTNIPANTKYKTANTTTLSFLVTGLKPNTLYEFSVMVTKGRRS
STWSMTAHGTTFEQVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYNTDV
NAEIHDWVIEPVVGNRLTHQIQELTLDTAYYFKIQARNSKGMGPMSEAVQFRTPKAESSD
KMSNDQALGSAGKGNRPVDVGTDYKTPISGSNSPHGSPSPLEYNMLLIIIVSVGVITIVV
VVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSP
DPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMM
PFDSQPPQPVVSAHPIHSLDNPHHHFHSGNLASPTCNYLHHQANLWPVGTSVSHSDRANS
TESVRNTPSTDTMPASSSQTCCADHQEPESASASYLPSTQEEETSQNVPTAHVRPSHPLK
SFAVPAVPPTGSTYDPALPSTPLLSQQASSHPVHSVKTASIGTLGRTRPPMPVVVPSAPE
VQETTRMLEDTESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggcgcctggcggcggcggctcctactgctgggctcgctgtgggtcgcc
ctgctcggcgggcagcgccccgactcctccgctgccgccgccgccgccgcgccgcctcag
cagcacctctcgcccgcagaacctacagtgagaacttctactccgttttatttcctagta
gaaccagtggacactctgtcagttagagcttcttctgttgtattgaactgttcagcatat
tgtgaatcacctccaaaaattgaatggagaaaggacgggactttcttgaacttggtatca
gatgaccgccggcaattgctaccagatggatctttgttaatcaacagcattgtccattcc
aagcacaataaacctgatgaaggtcattatcagtgtgtggcaaccgtggagagtcttggc
accatcgtaagcaggacagctaaacttacagttgcagggcttccaagattcattacccag
ccagagtctgcatctgtccatagaggaaaccccatagttcttaactgtgaagttaatgct
gacttagcaccgttcgtcaggtgggagctggatcatcagcccctctttctggacgatcgt
gtcctcaagttgccaagtggaactttaattgtcagcaatgctacagatgaggatgccgga
acttactgttgtgttatcgaaattggggggtctcccaaatacagcgacgaagcagagatt
aaagttcttccagaatccgacctttcttcaggcttgctttttttgaaacagccctttccc
cttaccaaagtgactgggcagagtgcagttttaccatgtgttgcttcaggcattcctgtc
cctctaatccgatggacaagaaaagaagaagagcttgttactgaaaattctcacaaattt
ctattcctgtctgggggaactctgaagataaatgatatcaccgaagatgattcaggaaca
tatacttgcatcgcagataatgggaatgaaactattgaagctcgagctgaccttactgtg
caggtgcctcccacatttctgaagcagcctgctaatatttatgcacacgaatccatggat
attgtgtttgaatgctgtgtgagcggaaagccaactccaacggtcaagtgggtaaagaat
ggagatgtggtcatccctagcgactactttaaaattgtaaatgagcacaacctacaagtt
ttgggtttggtgaaatcagatgaaggcttttatcagtgtattgcggaaaatgatgtggga
aatatacagtctggagcccagctgataatactggatcatgatgttgccatcccaacatta
cctcccacttcactgaccagtgccactactgaccatctagcaccagctacaactggacct
ttgccttctgcccctcgagatgtggtggcgtctcttgtatctactcgtttcatcaagcta
acatggaggacccctgcatctgacccacagggagacaatcttacctactcggtgttctac
actaaggaaatgagtaacagggagcgtgttgaaaacacaagtcatcctggggaaatgcaa
gtgacaatccaaaacctgatgcctgaaacagtatatattttcagagtggtagcccaaaac
agacatggacctggggagagctcagtaccattgaaagtagccacacaacctgaggttcag
cttccaggtccagctcccaacattcgtgcgtatgccacctctcccacgtcgatcactgtt
acttggggtacacccttatcgggcaatggcgaaatccagaactacaaactgtattacatg
gagaagggaacagagaacgaacaggacattgatgttggaggtctttcctatacaataatt
ggtttgagaaaatatacagagtatagcttcagggttgtggcctacaataaacatggtcca
ggagtctctactcaagacgtcgtcattcgtacactgtcagatgttcccagtgctgcaccc
cagaatctaacactagaagtgcaaaactccaagaacattatgatgcattggcagcctcct
cccacaggaacacataatgggcaaattactggctataagattcggtaccgaaaaatgatt
cgcaaaagtgatgtcaccgaaatcattgtggggacacaactttcacagctcattgaaggt
ttggaacgagggaccgagtacagcttccgagtggctgccttaacagtcaatgggacagga
atagctacggattggatatcggcagaaacatttgagagtgaccttgatgaaactcgggtt
ccagaagtgccaagttcgttgcatgtccgtccacttgtaactagtattgttgtcagctgg
actccaccggaaaaccagaacattgtggtcagaggctatgccatagggtatggcgtaggc
agtccccacgctcagaccatcaaggtggattataagcaacgatactacactattgaaaat
ttggatcccagttcccattatgtgataactttgaaagcctataacaacgttggtgaagga
atccctctttatgagagtgcagtgactagagcctatacagacacttctgaagttgattta
tttgttgttaatgctccatacactccagtgccagacccctcccccatgatgccacccgtg
ggagttcaggcttccatcctgagccatgacaccattcgtatcacctgggcagacaactct
ctgccaaagaaccagaaggtttcggatgcccgctactacacagtccgctggaaaaccaac
attcctgcaaacacaaagtacaagacagccaatacaactaccttaagcttcttggtcacc
ggcttaaaaccaaacacgttatatgaattctctgtcatggtgactaaaggccgaagatca
agcacttggagcatgacagcacatggcacgacttttgagcaagttccaacctctccacca
aaagatgtaacagtggtcagcaaagaaggaaaacccagaactataattgtcaactggcaa
cctccgtctgaagccaatggcaaaattacagggtacataatttactataacaccgatgtc
aacgctgaaattcatgactgggtcattgaaccagtcgtaggcaatagactgacccaccag
attcaagagctgaccctggacacagcgtattatttcaagatccaagctcggaactccaaa
ggcatgggccccatgtcggaggcagtacagttcaggactcctaaagcggaatcatcagat
aaaatgtctaatgatcaagcattgggatctgcaggaaaaggaaatcgaccagtggatgtt
ggaacagattataaaacacccatcagtggaagcaacagccctcatggcagcccctccccg
ctagaatacaatatgctcctgatcataattgtgtctgtgggagtgatcaccattgtggtt
gtagtgattgttgctgtattttgcactcgaaggaccacctctcaccagaagaaaaaacga
gctgcttgtaaatctgtgaacggatctcataaatacaaaggcaattccaaggacgtcaag
ccaccggatctttggatccatcacgagaggctggagctgaagcctattgataaatcccca
gatcccaatccaatcatgaccgacaccccgatccctcgtaactcccaagacatcaccccc
gtggacaactctatggacagcaatattcatcagagacgaaactcctacagagggcatgag
tcagaggacagcatgtccaccctcgcaggaagaagagggatgcggccaaagatgatgatg
ccgtttgattctcaacctcctcaacctgtggttagtgctcatcccatccattcccttgat
aaccctcaccatcatttccactccggcaacctcgcttctccaacctgcaactatctccat
catcaggcaaacctatggccagttggcacatctgtgtcccattcagacagggctaattcc
acagaatctgttcgaaatacacctagcacagataccatgccagcatcttcatctcagaca
tgttgtgccgaccaccaagagccagagagtgcttcagcatcctacctgcccagtacccag
gaagaggagacaagccagaacgtgcccactgcccatgtccgtccctctcatcctctgaag
agtttcgctgtgccagccgtcccgcccactggcagcacttacgaccctgccttgccaagc
acacctttattatcacagcaagcttctagccatccagttcattcagtgaagacagcatca
attggaactctaggaaggactcggcctccaatgccagtcgtagtcccgagtgcccctgaa
gtgcaggaaaccacaaggatgcttgaagacacagaaagtaattacgaaccggatgaactc
accaaagagatggcccacctggaaggactaatgaaggaccttaacgccatcaccacagcg
tga
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integrated database retrieval system
