Pantherophis guttatus (corn snake): 117674850
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Entry
117674850 CDS
T07329
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117674850 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117674850 (CSTF1)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117674850 (CSTF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
PAC11
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Aladin
CFAP251_N
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
DSE1_N
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Frtz
Motif
Other DBs
NCBI-GeneID:
117674850
NCBI-ProteinID:
XP_034288934
UniProt:
A0A6P9DBR0
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSSRRITPPCDRRQLPWSMTSMGSPTGELRPMRLPFLEADPRLQSMCGGSMQQPVRRSGP
RARLLLPPPPPPPPQPPPALPPPPPAPLHLPAQSPLDAVGAPAAVLSGDRSRTKDGLIPG
RQPLFTMYRPKVSLKDRQQLYRLIISQLLYDGYINIANGLINEVKPQSVCAPSEQLLHLI
KLGMENDDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVA
TYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVD
EVTCLAFHPNEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILV
GTQHPTLRLYDVNTFQCFVSCNPQDQHTDAICSVNYNASANMYVTGSKDGCIKLWDGVSN
RCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQV
HRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMT
CSDDYRARFWYRRSTTD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcgtcgtatcactccgccatgtgacaggcggcagcttccatggagcatgact
agcatgggctcacccactggtgaactgcggccaatgcgattaccatttcttgaagctgat
ccgcggcttcaatcgatgtgcgggggctccatgcagcagcctgttcgacggagcggtcct
cgggccagactgctgctaccgccgccgccgccgccgccgccacaaccgccgcccgccctg
cctccgccgccgcccgctccgcttcacctgcccgcccagtcgccccttgacgccgtgggg
gccccggcggccgttctgagcggagatcgatcgcggacgaaggacgggctcatacctgga
aggcaacccttgttcacaatgtataggccaaaagtaagccttaaagaccggcaacaactc
tacaggcttattattagtcagctgttatatgatggatatatcaatattgctaatggtctg
ataaatgaagtaaagccacagtctgtctgtgcaccctctgaacaactgttacatcttatt
aaactaggaatggaaaatgatgatagtgcagttcagtatgcaattggacgctctgataca
gtagctcctggaacaggaattgacttggagtttgatgcagatgtacagactatgtcccca
gaagcgtctgaatatgagacatgttatgtcacatctcacaaaggaccatgtcgtgtagct
acatacagcagagatggacagttaattgctacaggatcagctgatgcatcaataaaaata
cttgataccgaaagaatgttagcaaaaagtgctatgcccattgaggttatgatgaatgaa
acagctcagcagaacatggagaaccatcccgttattaggaccctttacgatcatgtagat
gaggtcacctgtttagcttttcatccaaatgaacaaatccttgcatctggatccagagac
tacactctgaaattgttcgactactcaaaaccatctgccaagagagctttcaaatatatt
caggaagcagaaatgctgcgctctatatctttccatccttctggggatttcatacttgtt
gggacacagcatcctaccctgcggctctatgatgtgaatactttccagtgctttgtgtct
tgcaatcctcaagatcaacatacagatgctatatgctcagttaattacaatgcaagtgct
aacatgtatgtaacaggcagcaaagatggatgcatcaaattgtgggatggagtttcaaat
cgttgtatcaccacttttgagaaggcacacgatggtgctgaagtctgttccgccattttc
tctaagaactccaagtacatactttcaagtggaaaggattctgtggctaaactatgggag
atatcaacaggaaggacactagtcaaatatacaggagctggcctgagtggacgccaggtt
cataggacacaggctgtttttaatcacaccgaagactatgtgctccttccagatgaaagg
accattagcctttgctgctgggattcacgaacggcggagcgaagaaacctcctttccttg
gggcataatagcatcgttcgctgcattgtccattcgcctacaaatcctggattcatgact
tgcagtgatgattacagagctcgattctggtaccgaagatcaaccacagattaa
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integrated database retrieval system
