Pantherophis guttatus (corn snake): 117675141
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Entry
117675141 CDS
T07329
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117675141 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117675141 (BARD1)
04121 Ubiquitin system [BR:
pgut04121
]
117675141 (BARD1)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117675141 (BARD1)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117675141 (BARD1)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117675141 (BARD1)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117675141 (BARD1)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117675141 (BARD1)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117675141 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
ANK_LRRK2
zf-RING_5
Prok-RING_4
NIBRIN_BRCT_II
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
Ank_KRIT1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117675141
NCBI-ProteinID:
XP_034289404
UniProt:
A0A6P9D113
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MRPSVLWSHSGNKPAGHMAQEQHPQSGTPWKETRLALRRLAECFKCSLCTNILKKPVNLG
SCEHIFCLTCVGNCIGTACPICQVPIMKQDVKINRKLDNIIKLYSKLQTLQDKDFSDRKD
NLSALGKKVGEAEAKRKQIKMSFSPHSRRMKFTLKTSPKKLEQLKQSVKDSGSCNLTSIY
DFVSSPPHEKPFREEQTPHQEYKKELRKKTLKDFSKQGNTFRNQQENSSERYNVAKQSKN
PIPSSGSKNTSGLRLITGTELAENAGECREPRNGRPVKPKEKCSNCNFSLMPNVFGGDLT
SEEWFSLAKETTQLKCDRQFAGSPISLPKCHKTKEGTTHQKSRLLKKASEQLPGNSVAAF
PLRDCAVSSPSLTLPGITSPLRNLEDFAYASDPELPKGSRNCAKKEAFLKKFSKNLSAKR
NHKGESLLHTTSIEGNLSAVECLLKKGADPNIKDYAGWTPLHEACNHGHKQIVELLIRHG
ALLNVTGYQNDMPLHDAAKNGHIEIVELLLLHGASRDVVNIFGHKPVDYAETEEMKSLLM
QPGKNDSSSIIQYAECINLDYCKKGPVVLLGSGLDPDQQLLLSKLATILKVRVCTEFNSS
VTHVIIPAYPVRTTMKCLLALLSGCWILTFMWVEASFGSGTFEQEEKYEVDGGPRQSRLN
TEQLLPKLFDGCYFYFLGIFKEHKKDDLKELVKAGGGQILLRKPKSDNDVTQTINTVAYH
AEITSDQSFCTQYIIYDASSNYKPKKVRQGKVWEVPSMWLIDCVMSFQLLPVKKLFS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccagtgtactctggagccattccggtaataagcccgccggccacatggcgcag
gagcaacacccgcagtccggaaccccttggaaagaaacgcgtctggctttgagacgattg
gccgagtgcttcaagtgctccctttgtactaacattctgaagaaacctgtgaacctaggg
agttgtgaacatatcttctgtctaacttgtgtaggcaactgtattggcacagcttgccca
atatgtcaggtaccaatcatgaaacaggatgtgaaaataaacaggaaactggacaacatc
atcaaactctatagcaaattgcaaactctgcaggacaaggatttctcagatcgtaaagat
aacttgtctgctttgggaaagaaagttggagaggcagaagctaaaaggaaacaaatcaaa
atgagtttcagtcctcatagcaggaggatgaaattcaccctgaagacaagcccaaagaaa
ttagagcagctgaagcaatcagtcaaggacagcgggtcttgtaacttaacctccatttat
gactttgtttcttcacctcctcatgagaagcctttcagagaggaacagacacctcatcag
gaatataagaaggagctaagaaaaaagactttaaaagacttcagcaaacaggggaacacc
ttcaggaaccagcaggaaaactccagtgaaaggtataatgtagcaaagcaaagcaaaaac
ccaatccccagttctggctcaaaaaatacctcagggttgaggctgataaccgggacagag
cttgcagagaatgcaggtgaatgcagagaacccaggaatggtagacctgtgaaacctaaa
gagaagtgtagcaattgcaacttttctcttatgcctaacgtttttgggggagatctgact
tctgaagagtggttttccttggcaaaggaaacaactcagttaaagtgtgacaggcagttt
gctggctctcccatttctttgcctaagtgtcacaaaacaaaagaggggactacccaccag
aagtcacgattgctcaaaaaggcctcagagcagttgcctgggaattctgtggcagccttt
ccccttagggactgtgcagtttcttccccatctctgacattgcctggaatcacatcaccc
ctaaggaacttggaagactttgcatatgccagtgatccagaacttccaaaagggtccaga
aattgtgctaaaaaggaggcattcctcaagaaattttccaaaaacttatcagccaagaga
aaccataaaggggagtctttacttcatactacttctattgagggtaatctttctgctgtt
gaatgcttgttgaaaaaaggagctgatcccaacattaaagactatgctggttggacacca
ctgcatgaagcctgtaatcatggacataagcagatagttgaattactgattagacatggg
gcactgctgaatgtgactgggtatcagaatgatatgccacttcacgatgctgccaagaat
ggacatatagaaattgtggaactgctacttttgcatggagcttctcgagatgtggttaat
atatttggtcacaaacctgtggattatgctgaaacagaagagatgaaatcgcttctaatg
caaccaggaaagaatgattcttcttcaattattcagtatgcagaatgcataaatctagat
tactgtaaaaaggggcctgttgttctcctcggaagtggtcttgacccagatcaacagctg
ctgttaagcaaattggccacaattttgaaggttagagtatgtacagagtttaacagttct
gtgacgcatgttattattcctgcatatcctgtgcgaactactatgaagtgcttgctggca
cttttatctggatgttggatcttgacatttatgtgggtagaagccagctttgggagtggc
acttttgaacaagaagagaaatatgaagtagacggtggtcctcgacaaagccgcctgaac
acagaacagcttttgccaaaactttttgatggctgctacttctatttcctgggaatattt
aaagagcacaagaaagatgacctcaaagaactggtgaaagctggaggaggacaaattctc
ctaaggaagcctaaatcagataatgatgtcactcagacaatcaatacagtagcttatcat
gctgagattacatctgaccagagtttctgtacacaatatataatctatgatgcctcttct
aactacaaaccaaaaaaagttcgtcaaggaaaggtttgggaagtgccctccatgtggctt
attgactgtgtgatgtcatttcaactattgcctgttaagaaattattttcctag
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integrated database retrieval system
