Pantherophis guttatus (corn snake): 117676101
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Entry
117676101 CDS
T07329
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgut04121
]
117676101 (ZSWIM8)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
117676101 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
117676101
NCBI-ProteinID:
XP_034291180
UniProt:
A0A6P9DIU1
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GSVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQIVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRGNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPHRRRDLCTQLRQWQLKVIENVKRGQHKKSLEKLFHGFKPAVEACYFNWEEAY
PIPGITYSSADKKNSFCWVKAIQQRNCRPPCIENFSDAGRGHGTDAMGTCLQLGDRSRLV
SQEPAVRPKELIGKRKVVSEGPQRVLRRLSAEGDKASYKTTANKGKLPVGKNLASKHGGK
RRMSSEDSSLEPDLAELTLDDSSLALGAEASNTFSFTDSPLSRSYRDTFEDDGGVYFSEA
TEPTLRSSPSTKKLSKEPVEEVGSGDDDLHGPDESSAGVCSKPKEVEENGAAGGEEEEDD
YQVYYLNPQEVAKEEDEKAEGGIEEEQDMFAGIKPLEQENRMEILFACAEALHAHGYSSE
ACRLTVELAKDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLSERQ
EYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGSSEMNTIRGRAEE
LREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAA
LGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQT
LSSFYSSSKPTVANQKSPSKHTTQSTAPMQHLPGTSVAQQTGVPPAVQSNPSEPFMEKTT
QENPQRSPCDPPVESSILKQEGKVPSRIALGSRGGYNGRCWGSPVRQKKKHTGMASIDSS
APETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARA
KTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGG
HQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVEC
WDGHLTPPEVASLADRASRARDSNMVRSAAELALSCLPHAHALNPNEIQRALVQCKEQDN
LMLEKACLAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTLAQREGATGCSANGARAS
CETVRGLPDARVTSESATVTVAAAVTAAATVVPVISVGSTIYQQHTVAGPAMAHAHTQGL
HPYTTLQTHIPCNPQYIGHPLQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPSLA
ATAVSFPGVPVPSMTQIAMHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGTSLTSLSSQP
SSLVTGGFPSEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYT
EDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMESLQRLNPAHVHNHLRTPAF
HQLVQRCQQAYIQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKR
SKQTKDLWQRVSLEMTTFSP
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgccgagtgggaagacggggaaaggttttccttcgaggactcggac
cgctttgaggaagactcgctttgctccttcatctctgaggcggagagcctgtgccagaac
tggagaggatggcggaaacagtcagccggacccaactcccccacggtcaaaatgaaagat
gggtccgtgatccccttggtggaactgtcagcaaagcaggtggcatttcacattccattt
gaagtagtggaaaaagtctacccacctgtgccggagcaactgcagcttcgcattgccttt
tggagctttccagagaatgaagaagacatcaggctatattcatgcttggcaaatggcagt
gcagatgagttccaacgaggcgagcaactcttccgaatgagggctgttaaagacccattg
cagataggtttccacctgagtgccacagtggtacctccacagatagtgccaccaaaagga
gcctacaacgtggcagtaatgtttgacagatgcaggattacctcatgcagctgtacatgt
ggagctggggccaaatggtgtgcccacgtggtagccctttgtctctttcggatacacaat
gcatctgcagtttgcttgagagcgcctgtctctgagtccctatctcgattacaaagagat
cagctgcagaaatttgcacagtacctcatcagtgaactccctcaacagatacttccaact
gctcagcgtctacttgatgagttgctatcctctcagtccactgccatcaacactgtatgt
ggagccccagatcctactgctggcccatctgcctctgatcaaagcacctggtacttggat
gaatctacattaagtgacaacataaagaaaactcttcacaaattttgtggtccctctcct
gttgtatttagtgatgtgaattccatgtacctgtcctccacggaacccccagctgctgct
gagtgggcctgtctgttacgccccctgagagggagagaacctgaaggcatatggaacctg
ctttcaattgtacgtgagatgtttaagagacgggataccaatgcagctcctcttctggag
atcctgacagaccagtgtctaacatacgaacagataactggctggtggtatagtgtaagg
acatctgcatctcatagtagtgcaagtgggcacactggccggggcaatggccagtcagaa
gttgctgctcatgcttgtgcaagtatgtgtgatgagatggtggttctttggagacttgct
gttttggatccaaccattagccctcatcggcgaagggacttgtgcacgcagctaaggcag
tggcagttgaaggtaatagaaaatgtcaaaagagggcagcataagaagtctcttgagaag
ttattccatggattcaaaccagctgtggaagcttgctacttcaattgggaggaggcatat
cctattccaggcatcacctatagcagtgctgacaaaaagaactccttttgttgggttaag
gccatccagcagaggaactgcaggccaccgtgtatagaaaatttttctgatgcagggaga
ggccatgggacagatgctatggggacatgtttgcagctaggagacaggtcacgacttgtc
tctcaggagccagctgtgcgccccaaagaacttattgggaaacggaaagttgtgtctgaa
ggcccccagcgggttctgagaagactttcagcagaaggcgataaagcttcatataaaaca
actgcgaacaagggcaagcttccggtgggaaagaacttggccagcaaacatggtgggaag
cgtcgtatgagtagcgaggacagttctttggagccggacttggctgaattgactttagat
gacagcagtttggctcttggagcagaggcgagcaatacattcagcttcacagacagcccg
ttgagcagaagctacagagatacttttgaggatgatggtggagtgtatttctctgaggca
accgagcctaccctcagaagcagtccttccacaaagaaactttcaaaggaacccgtggag
gaagtgggcagtggagatgatgacctccatggccctgatgaaagtagtgctggggtatgt
tcaaagccaaaagaggtggaggaaaatggcgctgctggaggagaagaggaagaagatgat
tatcaagtgtattatttaaatccccaggaggtggctaaggaagaagacgagaaagcagag
ggtgggattgaagaggaacaagacatgtttgctggaataaaaccgttggagcaagaaaac
cgaatggagatcctgtttgcctgcgcagaggctcttcatgcacatggctatagcagtgaa
gcttgtcgtctcactgttgaacttgcaaaagacttactggctaaccctccggatctcaaa
gtggagcaacccccaaccaagggaaagaaaaacaaagtatctaccagcaaacagacttgg
atggcaacaaacactttatccaaagccgcttttctgctgactgtactgagtgagcggcag
gaatatcacaatctggctttccagattggcatgtttgctctggagttacagaggccgcca
gcatctaccaaggccctggaggtcaagctggcataccaggaatctgagatcgtggccttg
ttgaagaagatcccacttggctctagcgagatgaatactattcgggggagggctgaagag
ctgagggaaggaacactgtgtgattaccgccctgtcctgcctctcatgctagctagcttc
atatttgatgtcttatgtgctccagtggtttctcctacaggatcaagacccccaagccgt
aattggaacaatgaaatgcctggagatgaagaacttggctttgaggcagccgtggcagca
cttggcatgaagacaacagtgagtgaagcagagcaccctcttctgtgtgaaggtactcga
agagagaaaggagatctagccttagccctgatgatcacttacaaggatgatcagtctaaa
ctcaaaaaaatcctggataagctgctggacagggaaagtcagacacacaaacctcaaact
ctgagttcattctactcatctagcaagcctacagtagctaatcagaaatctccttccaaa
cacactacccaatcaactgcacccatgcagcatctcccaggaacatctgttgcacagcag
acaggtgtaccgccagcagtccaaagcaatccttctgaaccctttatggagaagactacc
caagagaaccctcagagatccccttgcgacccacctgttgagtccagtatcctaaagcaa
gaagggaaagttcctagccgaatagctcttggaagtagagggggctacaatggaagatgc
tggggttcaccagtcagacagaaaaagaagcacacaggaatggcgagcattgacagcagt
gccccagaaaccacctctgacagttctcccaccctcagtcgacgccccctgcgagggggt
tgggcaactacctcctggggccgggggcaggacagtgacagcatcagtagttcttccagt
gattccttgggttcctcttcttccagtggaagccggagggccagcggaggggcacgtgca
aagactgtggaggttgggaggtataagggcaggcgaccggagagccatgccccccatgtc
ccaaatcagccctcggaggcagctgctcacttctattttgagttggccaagacagttcta
attaaggctgggggaaacagcagcacctccattttcacccatccgtcttctagtggtggc
caccaagggcctcatcgcaaccttcacctctgcgcctttgagattggactctatgcattg
ggactgcacaactttgtctcgccaaattggctctctcggacttactcctctcatgtctct
tggatcacagggcaagccatggagattggcagtgcagccttgaatatcttggtggaatgc
tgggatggacacctaactcccccagaagtggcatcgttggctgacagagcttcaagagct
cgggattccaatatggtgcgatcggctgctgagttggcattgagttgtttgccacatgca
catgccttgaaccccaatgaaatccagagagccctggtccagtgcaaagagcaggataat
ctaatgttggagaaggcttgcttggctgtagaagaggcggccaaaggcggcggagtttat
cctgaagttctgtttgaggttgctcaccagtggtactggttgtatgagcaaacagttggg
ggaactcttgcccagagggaaggagcaacaggctgcagtgcaaacggagcccgggcgtca
tgcgaaacagtccgtggactaccagacgccagagtgacatcagaatctgctacagtaacg
gtggctgctgcggtgacggcagcagcaacagtagtgcctgtgatctcagtggggtcaacc
atataccagcagcacactgtggcaggaccagcaatggcacacgcacacacccagggcctg
catccctacacgacactccagacccacattccttgcaatcctcaatacatcggccatcct
cttcagcacatgccacggccagcagtcttcccagtgcctgggtctgcttatccacagggt
gtccacccagcattcatcggggcccagtacccctactcggtaaccactccgtctttggca
gcaactgcagtgtccttcccaggagtccccgtcccttccatgacacagattgctatgcac
ccctaccatgctgagacagggctctcactgtcttccaatgtagcaataggaagtgttcac
gcagggtctactttcccagcaattcaagggacttccttaacaagcttgtcttctcagccc
agttcccttgtgacagggggcttcccttcggaagatgaacaacacagccaaccggtcagt
cctcaaggattgcactaccttcattctgcctaccgagttgggatgctggcactggagatg
cttggtcgcagggctcacaatgaccaccccaataacttctcacgcagccccccctacaca
gaagatgtgaagtggcttctcggactagcggccaaattaggtgtgaactacgtacatcag
ttttgtgttggtgcagccaagggagtcctgagtccttttgtgctgcaagagatcatcatg
gagtccctgcagagacttaatcctgcccatgtccacaaccacttgcgcacacctgccttt
catcagttggtgcagaggtgccagcaggcgtatattcagtacatccatcatcgtctgatc
catctcactccagcggactacgatgactttgtgaatgccattcgcagcgcccgaagcgcc
ttctgcctgactcctatgggcatgatgcagttcaatgacatccttcagaatctgaaacgc
agcaaacagaccaaggatctgtggcaacgggtctctctggaaatgactaccttttcaccc
tga
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integrated database retrieval system
