Pantherophis guttatus (corn snake): 117676312
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Entry
117676312 CDS
T07329
Symbol
CACNA1B
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04010
MAPK signaling pathway
pgut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117676312 (CACNA1B)
04020 Calcium signaling pathway
117676312 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgut04040
]
117676312 (CACNA1B)
Ion channels [BR:
pgut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117676312 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
117676312
NCBI-ProteinID:
XP_060551026
LinkDB
All DBs
Position
Unknown
AA seq
2327 aa
AA seq
DB search
MARFGEDLPSRYGGGGAGAPPGPGGARGSSRQGPPGQPGPPRPQMYKQTKAQRARTMALY
NPIPVKQNCFTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLP
DGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGIL
ATAGTQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAI
IGLEFYMGKFHKACFSNETGERLGDFPCGEDWPARRCEEGTCKKYWEGPNFGITNFDNIL
FAVLTVFQCITMEGWTDILYNTNDAAGNMWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRATI
KKSKNDLIHAEEGEDHFTDVCSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKA
QSFYWIVLCVVALNTMCVAIVHYDQPEGLTTTLYFAEFVFLGLFLTEMTLKMYGLGPRNY
FHSSFNCFDFGVIVGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFHFNDETPTTNFDTFPTAILTVFQILT
GEDWNAVMYQGIESQGGVHSGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKD
EEEMEEATNQKLALQKAKEVADVSPLSATNISITAKQQNSSKSKSVWEQRTSQLRVYNFR
TSCEALYNEMDPEDRVRYATNLHIRPDMKTHMDRPLVVEPRSEGHSGNANAVSPTEGQEA
SDQVKAPPTENEVVRKHHRHREKTGDTEKSSAVKEENGELGGGNNRDERHRPHRSRSKEV
GEGGGKEGKSERNRSQERGRHHHRRGSIEEGTEKEHRRHRGHRHPPVSDKSKKATEPSTG
PRPERRSRHRGGSRPGNREGDPGSKGEGGEEPHRRHKIRHKALSTYESVDKENGERKTGS
WGQRISRTFNLSEESQCDTEAGISVTVVPLHTLPSTCLQRVPEQSEDADNQKNVTRMAQP
SLDKSAPVNIPVTVTGPPGEASIIPMNNVEFEAKMEEKKDMDAEDEITNSTPKPILPYSS
LFILSPTNPIRCLCHYIVNMRYFEMVILFVIALSSIALAAEDPVQAESPRNEALKYLDYI
FTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGNKGKDINTIKS
LRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFF
YCTDESKDLEKDCRGQYLAYEKDEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPT
VLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSE
CSLEKNERACIDFAISAKPLTRYMPQNKQSFQYRMWKFVVSLPFEYFIMVLIALNTIVLM
MKFYGAPEPYEDMLKCLNIVFTSMFSLECILKIIAFGALNYFRDAWNIFDFVTVLGSITD
ILVTEIADNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFF
IYAIIGMQVFGNIALDDDSAINRHNNFQTFLQALMLLFRSATGEAWHEIMLACLSNQPCD
EHSNLSRNECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEF
IRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKNCPARIAYKRLVRMNMPISNDDLSV
HFTSTLMALIRTALDIKLASGMLQHQCDAELRKEVSVVWPNLSSKTLDLLVPPHKPEAMT
VGKVYAALMIFDFYKQNKNTRDPSHSGPGGLCQTGTVSLFHPLKAALEQSQTGFPNAFLR
QKSSASLNNGGALPMPEGGGIKESVSWGIQHTQNMFYETRTPVFERGHSEEIPVQQVVEM
QKISPTLANGEHQPGLEIQGRAASMPRLAAETQPIPDTSPMKRSVSTLNPQRPRATHLYE
HPRPAEHTHHHHHHRCHRRREKKQKSVDKPPNHLIDGEAPAGEATSKSKRQERGRSQERK
VHSSSSSEKQRFYSCDRYGSRDHSQPKSSECSRPPSPGGGLDHETQKQGSGSVNGSPLLL
TSGASTPCRGRRQLPQTPLTPRPSITYKTANSSPVHFSGFQTGLPTFSPGRLSRGLSEHN
ALLHGDSQGPSPTLMARIGSDPYLGHREESDSSYHMMPEDTLTFEEAVATNSGRSSRTSY
VSSLTSQSHQIRRVPNGYHYVLGLNAGSGTSTRARSYYHERDEDDWC
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagaggacctgcccagccgctatggaggtggcggcgcgggggctccc
ccggggcccggcggggcccgcggcagcagccgccagggacccccgggacaaccgggacct
ccgcggccccagatgtacaagcagaccaaggcccagagggcccggacaatggctctttac
aaccccattccggtcaaacagaattgtttcacagtcaaccgttccctcttcatcttcagc
gaggacaacgtgatccgcaaatacgccaagcgcatcacggagtggcctccatttgaatat
atgattctggctacgattatagccaattgcattgttttggctctggagcaacatctccct
gatggagataagacacctatgtcagagaggctggatgacaccgaaccgtatttcattgga
atattctgcttcgaagcgggcatcaagattattgctctgggttttgtttttcacaaagga
tcttatctccgcaacggctggaacgtgatggattttgtggttgtgcttacggggattctg
gctacagctgggacccagtttgaccttcgaacgctgagagccgtccgtgtgctgagaccc
ctgaaacttgtctcaggaatcccaagtttacaagttgtcctcaaatccatcatgaaggca
atggtacccctccttcagatcggcctcctcctcttcttcgccatcgtgatgtttgccatc
atcggtctggaattctacatgggcaagtttcacaaagcttgcttctccaacgaaacagga
gagagactgggagatttcccatgcggtgaagactggcccgctaggcgctgtgaagaaggc
acctgcaaaaaatactgggagggccccaactttggaatcaccaacttcgacaacatcttg
tttgctgtgctcacggtcttccagtgcatcaccatggaaggatggaccgatatcctctac
aacaccaatgatgctgcagggaacatgtggaattggctttacttcatccccctcatcatc
atcggctccttcttcatgctcaacctggtccttggtgtcttatcaggtgagtttgccaaa
gaacgagagagagttgaaaaccggcgagcttttctgaaactccggagacagcagcagatc
gagagagaacttaatggctacttggaatggatctttaaagcagaggaggtgatgttagcc
gaagaagacaagaatgctgaagagaaatcccccttggatgtgctgaaaagagcgacaatc
aagaaaagcaaaaacgatctcatccacgccgaagaaggagaagatcacttcacagatgtt
tgctctgtggggtctccatttgcccgggccagtctcaagagtggcaagaatgaaagctcc
tcctacttccgtcggaaagagaagatgttccgttttttcatccggcgcatggtgaaggcc
cagagcttctactggattgtcctctgtgtggtggccctcaacactatgtgtgtggccatt
gtgcattatgatcagccagaaggtctcaccaccaccctttattttgctgaatttgtcttc
ctgggtttgttcctcaccgagatgactttgaagatgtacggtctggggccaaggaactac
ttccattcctcgttcaattgctttgactttggggtgattgtgggaagcatctttgaagtc
atctgggcggtggtgaaacctgggacttcttttggcatcagcgtgctcagagccctccga
ctgttgagaatcttcaaagtcaccaagtactggaactctctgaggaacctggtggtctcc
ttgctgaattcgatgaaatccatcattagcctgctgttcctcctcttcctcttcattgtc
gtgtttgccttgctggggatgcagctttttggcgggcagtttcacttcaatgatgaaacg
ccaactaccaactttgatacctttcccactgccattctcactgtgtttcagattctgact
ggggaagactggaacgccgtgatgtatcagggcatcgaatctcaagggggcgtccattct
ggaatgttctcctcggtctacttcatcgtcctcacactcttcgggaactataccctcctg
aatgtcttcttggccattgctgtagacaacctggccaacgcccaagagttgaccaaggat
gaagaagaaatggaagaagctaccaaccaaaaacttgccttgcagaaggcgaaggaggtt
gccgacgtcagtcccctgtcagctactaacatttctatcacagccaaacagcagaattcc
tccaaatcgaaatccgtgtgggaacagagaaccagccagctccgcgtctacaacttccgc
accagttgcgaagccttgtacaacgagatggacccggaggacagggttcgctatgccacc
aacctccacatccgtccggatatgaagactcacatggaccgacctctggtggtcgagccg
aggagcgaaggccatagcggtaacgccaacgccgtgagccccacagagggccaggaggcc
tccgaccaggtgaaggccccaccaacggagaacgaggttgtgaggaaacaccaccggcat
cgtgagaagacgggagacacggaaaaaagcagtgccgtcaaggaagagaacggggaattg
ggcggtggtaacaacagggacgaacgacaccggcctcaccggagtcgtagcaaagaggtg
ggcgaagggggtgggaaggaagggaagagcgaacgcaaccgaagccaggagagaggcagg
catcaccaccgtcgggggtccatcgaagaaggcactgagaaggaacatcggcgtcatcgc
ggccatcgacatcctccagttagcgacaagtcaaagaaggcaacggaaccgtcaacggga
ccaagacccgaacgacgttcccgtcaccgaggagggtcaaggccaggcaaccgagaaggg
gaccctggctccaaaggggaggggggtgaagagccccacagacggcacaagatccggcac
aaggctctctccacttacgagtcggtggacaaagagaacggagagagaaagacggggagc
tggggacaaaggatctcaagaacgttcaacctaagtgaggaaagccagtgtgacaccgag
gcaggcatcagtgtgaccgtggtccctttacacaccttgcccagcacctgtctgcagagg
gtacctgagcagtcggaggatgccgacaaccagaagaatgtcactcgtatggctcaacca
tctttggacaaatctgcccctgtcaacattccggtcactgtcaccggtccccccggggag
gcttccatcataccaatgaacaacgttgaatttgaagccaaaatggaagagaagaaggac
atggatgctgaagatgagataaccaacagtacacccaagccgatccttccctacagctcc
ttgttcatcttaagcccaaccaacccgatccggtgcctctgtcactacattgtcaacatg
cgttacttcgagatggtcatcctctttgttatcgcactcagcagcatcgccctggccgcc
gaggatcctgttcaagcggagtcgcccagaaatgaggctctcaagtacctggattatata
tttacaggtgtctttacctttgagatggtgataaagatgattgatttgggactcctgctg
catcccggtgcctatttccgcgatctctggaacatcctcgacttcattgtggtcagtgga
gcacttgtggcatttgccttttcagggaacaaagggaaggatattaacaccattaagtcc
ctccgcgtgctacgggtccttcgcccgttgaaaaccatcaaacgcctacccaaactgaag
gcggtcttcgactgtgtggtgaactccctgaagaacgttctcaacatcctcattgtctac
atgctcttcatgttcatcttcgccgtcatcgcggtgcagcttttcaaaggccggttcttc
tactgcaccgatgaatcgaaggacttggagaaagactgcagaggccagtatctggcttac
gagaaggatgaagtggaagctcagcccagacaatggaagaaatacgattttcactatgac
aatgttctctgggctctgttgaccctgttcacagtctccactggagaaggatggcccact
gttttgaagcactctgttgatgcaacgtatgaaaaccaaggcccaagtcctggctaccgg
atggagatgtcgatcttttacgtcgtctattttgtcgtcttcccgtttttctttgtgaat
atcttcgtagctttgatcatcatcaccttccaagaacagggcgacaaagtgatgtctgaa
tgcagcctggagaaaaatgagagagcctgcatagattttgccatcagtgccaagccttta
acccgctatatgccccaaaacaagcagtcattccagtacaggatgtggaaatttgtggtg
tctcttccttttgagtactttatcatggtcctgattgccctgaataccattgtcctcatg
atgaagttctatggtgcccccgaaccctacgaagatatgctgaaatgcctcaatattgtc
ttcacctccatgttttcactggaatgtatcttgaagatcatcgcctttggtgcattgaat
tattttcgcgatgcctggaacatttttgattttgtcacagtcttgggaagtattactgat
attttagtcacagagattgcggataatttcattaacctgagcttcctccgacttttccgg
gcagcccgactgattaagcttctccgtcagggctacaccatacggattctgctgtggact
tttgtccagtctttcaaggccttgccatatgtgtgcctcctcatcgccatgctgtttttc
atctatgccataattggcatgcaggtctttggaaacatcgctctggatgatgacagcgcc
attaatcgtcacaataacttccaaacctttctgcaagcactaatgctgctttttcggagc
gctactggagaagcctggcatgaaatcatgcttgcgtgcctcagcaaccaaccctgcgac
gagcactccaacctcagcagaaacgaatgtggcagtgactttgcttacttctactttgtc
tccttcatcttcctctgctcctttctgatgttgaacctgtttgtggctgtaatcatggac
aactttgagtacttgacccgagattcatccatccttggacctcatcatctggatgagttc
attcgtgtgtgggcagagtacgacccagctgcttgtgggcggatcagttacaccgacatg
tacgagatgctgaggcacatgtcgccaccacttggcctcgggaagaactgtcccgctcgt
attgcctataagcgtttggtcaggatgaacatgcccatctcaaacgacgatttaagcgtc
cacttcacctcaacgctaatggccttgatacggacagccctggacatcaaacttgcatca
ggtatgttgcaacaccagtgtgatgctgagctgaggaaggaggtttcagtggtttggccc
aatttgtcctccaaaaccttggatctgttagtgccacctcataaacctgaagccatgaca
gtggggaaggtttatgcagccttgatgatatttgatttctacaaacaaaataaaaacacc
cgtgacccttctcactcagggcctggaggtctctgtcagactggcactgtttcccttttc
catccgctgaaagcggccctcgagcaaagccagacaggattccccaatgctttcctgcgt
caaaagagctccgcgtcactcaacaatgggggcgccctgccaatgccagaaggaggaggc
atcaaagaatccgtgtcctgggggatccaacacacccagaacatgttttatgaaactagg
acaccagtgtttgaacgaggccattcggaggaaattcccgtccagcaggttgtagaaatg
caaaaaatcagcccaactttagccaacggggagcatcaaccaggactggaaattcaaggg
cgagcggcttccatgccacggctggcagccgagactcagcccattccggacaccagcccc
atgaagcgctcagtctctacgctcaacccacagcgtccccgcgccacgcatctttacgaa
catccccggccagctgaacacacccatcatcatcatcaccatcgttgccaccggcggaga
gagaagaagcagaagtcggttgacaagccacccaatcatttgattgatggtgaagctcct
gcaggagaagccacctccaagtccaaaaggcaggagcggggccggtcccaggaacggaaa
gtccattcttcctcttcctctgaaaagcaacgcttttactcctgcgaccgctacgggagt
cgggaccattctcagcccaagtcctctgagtgcagtaggcctccgtctcctggtggaggg
ctggaccacgagacacagaaacagggcagtggttcagttaacgggagccccctgctgttg
acctctggtgctagcaccccatgccgtggtcggaggcagttgccgcaaactccgctgact
ccacgccccagcattacctacaagactgccaactcctcgcctgtgcatttctctgggttc
cagaccggcctgccaactttctccccgggacgcttgagccggggtctctctgagcacaat
gctttgctgcatggcgactcccagggaccctcaccaaccctgatggcacgcatcggttcg
gacccttacctgggacaccgagaagagagtgacagttcataccatatgatgcctgaggac
acgctcacctttgaggaggcagtggccaccaattcagggagatcctcccggacctcttat
gtctcctctctaacatcccagtcccatcaaatccgccgagttcccaatgggtaccattat
gtcttgggactaaatgccggctctggcaccagcactagggcgcgtagctattaccacgag
cgagacgaagatgattggtgctag
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integrated database retrieval system
