Pantherophis guttatus (corn snake): 117676327
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Entry
117676327 CDS
T07329
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgut03036
]
117676327 (JMJD1C)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117676327 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
FYVE
C1_2
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
117676327
NCBI-ProteinID:
XP_034291623
UniProt:
A0A6P9D6A5
LinkDB
All DBs
Position
Unknown
AA seq
2337 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSSQNSNTAHGHYTRAQANSPRPAMNSQNAAPKQNSQQ
LQRNARPNKRKGSDSSMPEEEKTKEEKYDCISHGENSKSKNKPFMFKRRKPEEDEEKMSA
KRQRIDNTSDSSESSDSENSNKRLTDTSSEQNSDTELKSKNVVKINGKEGKSQSDMVEDK
NLTGNQSPWHEVQEDKTQQMERPESADLEFQEISLHRPELPTVYDRSDNDGCIQECRIEN
KHHREHLLDEQFVTSCPTPKSYIDINTETSSVNQTQENLSSSFSLQTGQETASLISDSKQ
PSTNTNILEIKKSETIENWINNANKMDLMQSNIGKNISANEHLNSENIHCGSAPSLTVIS
LAEEGRVHKQTAVSDAMKSKTNPQVENTKIKPNTSPEIKYKPPQSPDTVKSKVNYLNSHV
IGVTKTAVKTEPDLPRSIFHPIPPRVTSLEVTKNPLSVDKKEHFTIYRDSILLGQETGTN
HMTPYLHQHNYPPHSTSHRTSLNPSTHHSALTGTPHLLAESSNQTPLSAINTHPLSSASH
HSVHHQHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQLLQHQSPHLLGQTH
PSTSYNHLGLYPIIWQYPNGAHAYTGLGIPPSKWVHSETSVNTETSLRRNTPNPWLHQPT
PATSSDGLGLLSHIPVRPSSAEPHRPLKLTSHSSPPLSKGIVDRHKDELERKGIFESLHS
AKSDLEQNRSQAAKEGHLQRQFVDPLQRSFQEAGERLSKYKEEHRRILQESIEVAPFTTK
MKAHENEKESYSRMMPLSSSSPKSHGGKPDKDSELYKMKHSVPQSLPQSNYFTTLSNSVV
NEPPRTYLPKEIAGTCADKQNTCPSTTAAATQSLASFTSSLSKPPPLIKHQPETESSVGK
GTDQLSQQMTSHSVNSFRSNNGSPTQLTISSSGSLRTMPALHRAPVFHPPVHPNLERKEG
SYSSLSPPTLTPVQPVNTGNKAHELQKPPTLVPEPKETQNSYKSVTDQKLSALWKNSSSP
NNEKIEWHLERTHGKSSSATASVIVRPPSSSKYDTVSVVQSAPKVQVTERLKGINQPVCL
KSVEAKESGRTVVSKMNSDVIHACYEKNFPAASQGSVPSSVVQTTTVLCSTITDVVTSVT
TSDVPGTGSSQVTDCLPKGGLPCTPIDSTVSRPINKDVAHKEECGVSSTAPVTVACCKTE
SSLQVSTGFSGPSDFVHLKKHKAALAAAQFKINSTNDAESHTVKNLIYPASVSVDSAVNS
STINKGNTLSGGQISQTSQANYHTKLKKAWLTRHSEEDKITNKKESSENCVSEMIKPCTV
NLIASTSNDLQNNIDNKLAGEKLVKEEKHARRKTKRMYESGSESGDSDESESKSEQRTKR
QPKPTYKKKQNDLQKKKGDLEEDVKPNGLLSRGAKEKNKLKLQSGNSNTGIPRSVLKDWR
KVKKLKQTGESFLQDDSCYEIGPNLQKCRECRLIRSKKSEESAHSPVFCRFYYFRRLSFS
KNGVVRIDGFSSPDQYDDEAMNLWTHESYEDDEMDLETCKYILEHIGDKFCQLVTSEKTA
MSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDK
ELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTELVEALHTLREKHEIKPHCQCGSKQNVQI
GRFPPVNGVSQILQNVLNHSNKISLCIPELQQQKPSQKAEANGNASPGSDISSESKLNPP
ESQSPLHWLADLAEQKAREEKKENKDYPLGKHTKEEPEQDNSESLNFKVSTPLSQNNEQG
STLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASSKSGRTMPNILDDIIASVVENKIPP
NRTSKINVKSEMKEEPKNNRKSISDDNNRLFNHIPHSWICNKHVLWLSDHENNNNWKLFK
ECWKQGKFVLVSGIHKKMNASLWKADFISSDFGDVKADLLNCKDSITASGNVKEFWDGFE
EISKRQKSKNGETIVLKLKDLPSGDDFKTMMPARYEDLLKSLPLPEYCNPEGKLNLASYL
PEFFVRPDLGPRLCSAYGVAAAKDHDVGTTNLHIEVSDIVNILVSVGIAKGNGVPSKSGV
LKKFEEEDLDDLLRKRLKDSSELPGALWHIYANKDADKIKEFLQKVAKEQGLDVLPEHDP
IRDQSWYVNKKLRQRLFKEYGVKTCTLIQFLGDAVVLPAGALHQVQNFHSCIQVTEDFVS
PEHLTQSFHLTQELRLSKEEINYDDKLQIKNILCHAVKEMVRALKTHEHEIEDIEEN
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattctttaaacggctatagggtgagagtatatagacaggactctgcc
acccagtggttcactggtataattactcatcatgatctgttcactcgcactatgattgtt
atgaatgatcaggtattagagccacaaaatgttgatccatctatggttcagatgaccttt
ctagatgacgtcgttcattctttgctgaaaggtgaaaacataggcattacgtcacgacgc
aggtctcgttccagtcagaacagcaacacagctcacggccactatacccgagctcaagca
aatagcccgaggccagcaatgaattcccaaaatgcagcaccaaaacagaattcacagcaa
ttacaacgaaatgctcgtccaaataaaaggaaaggttccgatagtagcatgccagaggaa
gagaagactaaagaagaaaaatatgactgtataagccatggagaaaattcgaaaagtaaa
aataaaccatttatgtttaaaagaagaaaaccagaagaagatgaggaaaaaatgagtgca
aagagacagcgtatagacaatacttcagacagttcagagagtagtgactctgaaaattca
aacaaaagattgacagatacttcctcagagcaaaattcagatactgaattgaaaagcaaa
aatgttgtaaagataaatgggaaagaaggaaaatcccagagtgacatggtagaagacaag
aacctaacaggcaaccagtctccctggcatgaagtacaagaagataaaacacaacaaatg
gaaagaccagaatcagctgatttggaatttcaggaaatttcactccatcgacctgaactg
ccaacagtctatgatcgtagtgataatgacggctgcattcaagagtgcagaatagaaaat
aagcatcacagagagcatctactcgatgaacaatttgtaaccagttgtcccacaccaaaa
agttatattgacataaatactgaaaccagttcagttaaccagactcaggaaaacttatca
agtagttttagtttacaaactggtcaggaaacagcatctcttatcagtgattctaaacaa
ccatctacaaataccaacattctggaaattaaaaaatcagaaactattgagaactggatt
aataatgccaataaaatggatctgatgcaatcaaacattgggaaaaatatatctgcaaat
gaacatttaaattctgaaaacattcactgtggttctgccccatcgttaactgtaatatct
ctagcagaagaaggcagagttcataaacaaacggcagtctctgatgctatgaagtcaaaa
actaatccacaagttgaaaacactaaaatcaagccaaacacctcaccagaaattaaatat
aagcctccccagtcgccggacactgtgaaatccaaggttaattaccttaacagccatgtt
attggagtaacaaagacagcagtaaaaacggagcctgatttgcccaggtctatcttccat
ccaattccacctagagttacttcgttagaagtgactaaaaacccactttctgttgacaaa
aaagaacatttcacaatttacagagattccattcttcttggtcaagaaacaggaactaat
cacatgacaccatatttacatcagcataattacccacctcattccacttcccatagaact
tctttaaatccaagcactcatcactctgcattaacaggcacaccccatttattagccgaa
tcctcaaatcaaactccattgtctgctattaacactcaccctcttagcagtgcatctcat
cactctgttcaccatcagcatctgctccctgcagttttaccaggcgtgcctacagcctct
ttgttgggaggccatccacgactagaaacagctcatgcaagcagtttaagtcatttagca
ttagcacatcagcaacagctgctacagcatcagtcaccacatcttctggggcaaactcac
ccatctacttcatataatcatttaggactttatccaattatttggcagtatccaaatgga
gcacatgcttatacaggacttgggataccaccgtctaaatgggtccattcagaaacttct
gttaataccgagacttctttgagaagaaatactcctaatccttggttacaccagcccacc
cctgcgacctcatctgatggtcttggattgctgagtcatattcctgtaagaccgtctagt
gcagagccacatcggccactcaagttgacatcccactctagtcctcccttgtcaaaaggc
attgtggatcgccataaagatgaattggagaggaagggaatttttgaatctctgcattca
gcaaaatcagatctagaacagaacagatcacaggctgcaaaagaaggccacttacaaaga
caatttgtggatcctctgcaaagatcatttcaagaggcaggggagagactaagcaagtat
aaagaagaacacagacgaatactgcaggaaagcattgaggttgcccctttcacaactaaa
atgaaggcccatgaaaatgaaaaggagtcttattccagaatgatgcctttatcatcctct
agtcccaaaagccatggaggaaaacctgacaaagattcagaactctataaaatgaagcat
tcagtaccacagagcttgccacagagtaattacttcaccaccttgtctaatagtgtggtg
aacgaacctccacgaacgtacttgccaaaggaaattgcaggcacgtgtgctgataaacag
aatacttgtccgtcaacaacagctgctgctactcagtcactcgcttctttcacgtcatcc
ctttcaaaacctccgcctttgattaagcaccagccagaaactgaaagctcagtgggcaag
ggaacagatcagctttcacagcaaatgacgtcccattcagtaaattcttttagaagtaac
aacggaagccctactcagttaacaatttcatcttctggctcactccgaacaatgcctgct
ttacacagagcacctgtgtttcatccacctgtccatcccaacttggagagaaaagaaggc
agttacagtagcctttctcctccaaccttaactccggtgcagccagttaatacaggtaac
aaagcccatgagttacagaagccaccaactttagtacctgagccaaaggaaacacagaat
agttacaagagtgttaccgatcagaaactttcagctctatggaaaaatagtagtagtcca
aataatgaaaaaatagaatggcacttggaaagaactcacgggaaatcatcttctgccaca
gcgtctgtcattgtacgcccaccatcaagttcaaagtatgatacggtatcggtcgtgcag
tcagctcccaaagtgcaagttactgaaagattaaaaggaataaatcaaccagtttgcctt
aagtcagtggaagccaaagagagtgggagaacagttgtgtcaaaaatgaattcagatgtg
attcatgcctgctatgaaaagaattttccagctgcttcccagggcagtgttcccagttca
gtcgtacaaaccacaactgtgttatgcagtaccataacggatgtcgtcacgtctgtgact
acttctgatgtaccaggtacaggcagttcacaagtaacagattgtctgccaaaaggaggg
ttaccctgtacgcccatagacagtactgtctctaggcccataaataaggatgtggcacac
aaagaggaatgtggtgtcagctcaacagctcctgttacagtggcttgctgcaaaacagaa
agtagccttcaggtgagcactggattctctggcccatcagacttcgttcacttgaaaaag
cacaaagcagcattggctgcagctcagtttaaaattaatagtaccaatgatgctgaatct
catactgtgaaaaacctaatatatccagcctcggtttctgtagatagtgctgtcaactca
agtacaatcaacaaaggaaatactctgagtggtgggcaaatttcccagacgagtcaagca
aactatcacaccaaattaaaaaaagcttggctcacgaggcattcggaagaagacaaaatc
accaataaaaaggagagttccgaaaattgtgtctcagaaatgataaagccgtgtactgtt
aacttaattgcttctacatcaaatgatttgcagaacaacatagacaacaaattggcaggg
gaaaagcttgtgaaagaagagaaacacgcaaggagaaaaacaaaaagaatgtatgaatct
ggctctgaaagtggagattctgatgagagtgagagcaagtcagagcagaggacaaaacgg
cagccgaagcccacatacaaaaagaaacagaatgatttgcaaaagaaaaaaggagacctg
gaggaagatgtaaaacccaatgggcttctcagcaggggtgccaaagaaaaaaacaaattg
aagttacagagtggcaacagtaacactggcatacctcgttcagtattaaaggactggcgt
aaagtaaagaagctgaaacaaactggagaatcttttttgcaagatgattcttgttatgaa
ataggacccaatttgcaaaaatgcagagaatgtagactgattagaagcaagaaaagtgaa
gaatcagctcattcaccagtattctgtagattctattactttcgccggctttcctttagc
aaaaatggagtggttcggattgatggcttttcttctcccgatcagtatgatgatgaagct
atgaatttatggacacatgaaagttatgaagatgatgaaatggacttagaaacttgcaaa
tacatcttagaacatataggtgacaaattttgtcagttagtgacatctgagaaaacagct
atgtcctgggtcaaaaaggatgccaaaattgcttggaagagagcagtcagaggagtccgc
gaaatgtgtgatgcctgtgaggccaccctgtttaatatccactgggtctgccaaaaatgt
ggatttgtggtctgtctagattgctataaggctaaggaaaggaagagttctagagataaa
gaactgtatgcatggatgaaatgtgtgaaaggacaacctcatgatcataaacatttaatg
ccaactcaaattattcctggatcagttttaacggaacttgttgaagcattacatactctt
agagagaaacacgaaattaaaccccattgccagtgtggcagcaaacagaatgtacaaatt
ggcaggtttcccccagtgaacggagtatctcagattttacagaatgtccttaatcacagt
aataaaatttctctgtgcatacctgagttacaacagcaaaagccatctcagaaagctgaa
gcaaatggcaacgcaagcccaggaagtgacataagttcggagagcaagttaaatcctccc
gagtcacaatccccactgcattggttggcagatctagcagagcaaaaggctagagaagaa
aaaaaagaaaataaagattatccccttggaaagcatacaaaggaggaaccagagcaagac
aactcagaatctcttaatttcaaggtgtcaactcctttgtctcaaaataatgagcagggc
tcaacattacgagacctgctgactactacagctggcaaattgcgcctaggctccacagat
gctggcattgcttttgctccggtttattcaacaggaacagcaagtagcaaaagtggaagg
actatgccaaacattcttgatgacataattgcttcagttgtagaaaacaagataccacca
aatagaacatcaaagataaatgtaaaatctgaaatgaaggaagagccaaagaacaacaga
aaaagcatttcagatgataacaaccgattattcaatcatattccacattcatggatttgt
aataagcatgttttgtggctcagcgatcatgaaaacaacaacaactggaaactcttcaaa
gagtgttggaaacaaggaaagtttgtattagtctccggaatccacaaaaaaatgaatgcc
agcttgtggaaagcagattttattagttcagattttggtgatgtcaaagctgatcttctg
aattgcaaagatagcattactgcaagtggcaatgtcaaggaattctgggatggttttgaa
gaaatttcaaagcggcaaaaaagtaaaaatggagaaaccattgtactgaagctgaaagac
ttgccttcaggggacgatttcaagaccatgatgcctgcaaggtatgaagatttattaaaa
agtttaccgctacctgaatattgtaacccagagggaaaacttaatttggcttcgtatttg
ccagaattttttgtgcgcccagatttgggacctagattatgcagcgcatatggtgtggct
gctgcaaaagaccatgatgtcggaactacaaatcttcatattgaagtatctgacattgtg
aacatccttgtcagtgttggtatagcaaaggggaatggagtcccttcaaaatcaggggta
ttaaaaaagtttgaagaagaagatttggatgatctgctaagaaaaagactgaaggattca
agtgaattgccaggtgccttgtggcatatttatgccaacaaggatgccgacaaaataaag
gagtttctacaaaaagttgcaaaggaacaaggtttagacgtattaccagagcatgatcca
atacgtgatcagagttggtatgtaaacaaaaagctccgccaaagactgtttaaagaatat
ggagtaaaaacctgtactctcatccaatttcttggtgatgctgtggttttaccagcagga
gctctgcaccaggtgcaaaattttcatagctgtattcaagtaacagaagactttgtatcc
ccagaacatcttacacaatcttttcatttaacacaagaacttaggctctcaaaagaagaa
atcaactatgatgataaactgcagataaaaaatatattatgtcacgcagttaaggaaatg
gtaagagctctgaaaactcatgaacatgaaattgaagatattgaagaaaattaa
DBGET
integrated database retrieval system
