KEGG   Pantherophis guttatus (corn snake): 117676356
Entry
117676356         CDS       T07329                                 
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
pgut  Pantherophis guttatus (corn snake)
Pathway
pgut04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pgut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117676356 (UFD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgut03009]
    117676356 (UFD1)
Ribosome biogenesis [BR:pgut03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    117676356 (UFD1)
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2
Other DBs
NCBI-GeneID: 117676356
NCBI-ProteinID: XP_060539754
UniProt: A0ABM3YUF5
LinkDB
Position
Unknown
AA seq 301 aa
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERQAPHEESADVEADHSGYVSDLGFRAFSGSGNRLDGKKK
GVDPSPSPIKPEDIRRLVGPFFFFFLLPPQFPQIVCCFFFLVVWFSSSLVLFRPSSAVCN
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgttttctttcaacatgtttgatcaccccattccccgcgtcttccagaatcgtttctcc
acccaataccgctgtttctccgtctccatgctcgctggccctaatgaccgatccgatgtg
gagaagggcggaaaaataattatgccaccctctgccttggatcaactcagtcggcttaat
attacctacccgatgttgtttaaattgacgaataaaaattcggaccggatgactcattgc
ggcgtgctggaatttgtggctgatgaaggcatctgttaccttccacactggatgatgcag
aatcttcttctggaggaaggaggcctggtgcaagtggaaagcgtcaacctccaagtggcc
acctactccaaatttcagccacagagtcccgattttctcgacatcaccaaccccaaagct
gtattggaaaacgcgctccggaattttgcttgcctcaccactggagacgtcatcgccatc
aattacaacgaaaagatctatgaacttcgcgtcatggagaccaagccggacaaagctgtg
tccatcattgaatgtgacatgaatgtggacttcgatgcacctttgggttacaaagagccc
gagagacaagcgcctcacgaggagtctgctgatgttgaagcagatcacagcggctatgtg
agcgatctgggattccgtgcgttttctggatctgggaacaggttggatggaaaaaagaag
ggagtcgatccaagcccgtccccaattaaaccagaagatattcgacggttagttgggcct
ttcttttttttttttttacttccaccacaattccctcagatcgtttgctgtttttttttt
ctggtggtctggttttcctcatcgcttgttttgtttaggcctagttcagcggtctgcaac
ccttaa

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