Pantherophis guttatus (corn snake): 117676445
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Entry
117676445 CDS
T07329
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117676445 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117676445 (NUP98)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117676445 (NUP98)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117676445 (NUP98)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117676445 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
117676445
NCBI-ProteinID:
XP_034291808
UniProt:
A0A6P9D6S4
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNTGFGATSGGAFGTSAFGSNNNAGGLFGSTQTKPG
GLFGASTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSTQSNAFAQNKPVGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGATSFSTVPTGTTIKFNAPNGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATPGLFGSSTATSSAAT
GLFGSSTTNTGFSYGASKTAFGTSTTGFGTGTGSLFGSNQPTPSLFNKPFGQPTTAQNTG
FSFTNTSTLGQPNTNTMGLFGAAQPTQTGSIFGTAANTNTAAAFGTGTGLFGQPNTGFGV
GGSSLFSNKPAGFGTTTTSAPSFGTTTTGLFGFNANTTGNSLFGNKPATGALGPGLGAGF
GTALNPGQNSLFGSTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNVSAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTSGSSKSHLFDGLDDDEPSLTNGAFMPKKSIKKLVLKNLNSGSLFSPGGAE
VDDIASPSIYPENGDRSVSENHRQDEEQEDDSYSREMSRFLTNVITKPLPQTPENAPHKH
HNNSVDDTLLALNVRPALRNGLENSLEEASYHEESLQEDLDKESEDQLHSTHPAGIVLTR
MGYYTIPSLEELARMTSDMGECIVTDFTVGRKGYGSIYFEGEVNVTNLNLDEIVHIRRKE
VIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRSVIKSPERLTEMNYEGRLEAASRK
QGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEDEDNLAKVEAKKLKTAQVPLPGQLMSQ
QMAAAGKLAPPSKSPEADHLGKGVEFDSDMADITQELLPESLAEENLVEEQEPVPASTHI
ASSLDINPHTLQIMKASLLADEEELDWMTDPQFGKAAAEMDLSQEICSPRLPISSSSRGW
KSRPPGSRLLQSRLSTGSFLLPSASLQDSRSPRTSSMGGALPAPPWAALSPLASAFVMPR
SATEMPLKTVGIRRQPGLVPLKKSIAYGKGRLLKDMALFMGRSFRVGWGPNWVLAHGGDR
LSPLSEPEDHGEATEYGFLPAPVAPKQVSESPFKVHLEKLTLDGKPTDRVYLLPLEIKLK
HSTIHLDDPCPFLAPNPGVATIHEYAAWASEASEDAEEEEEAVLRAWGLVWRLCEALWGR
LKELEGRLEEPGEYGLLLERRRAFSHWLSRTAAERIQEEVSLRQNDSPAEAVFSYLTGKQ
IGNACRLAQQSGDLRLSLLLSQLVGSQEVRELLALQLADWHQLQADGFIQDERLRIFCLL
AGKPVWQLSEKRTINVCSQLDWKRSLGVHLWYLLPSTAPLSKALSMYEAAFQVSPDGERY
ACPPLPPYLEDSGYVVENDNAQRPLRDVCFHLLKLYSDRCYDLHQLLDPRSITADPLDHR
LSWHLWEALRALNYTHLSEQCQGVLNASYAAQLEREGLWEWAVFVLLHTSNAQTRERAVR
ELLNRHCKLLELPESRDKEAFLTQKLCVPPEWIYEAKALWARREGDKTCEALCLFKAGHW
NQCHQLVVRHLASDAIINENYTYLKGFLEDLASPERCSLIQGWDTAGLVFLDYLQVIEMV
SRIQQLDCTGYELEEIHSKVISLCSRIELVQCHGAKDRLAQSEMAKRNADILRVVLSLQH
PPDTASGATPDVQRVPLRLLAPHISRLPMPEDYALEELRGLTQSYLRELMVVAQ
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcttttggaacgccttttggcggcaacacagggggatttgggacaact
tcgacttttggacagaatactggctttggggcaaccagcggaggagcctttgggacgtct
gccttcggatccaataacaatgccggaggactctttggtagcactcagaccaagccagga
gggctctttggggcaagtactttcagccagccagccacgtcatccactagtaccggtttt
ggtttcggcacgtcaactggaacttccagcggcctgttcgggaccgcaagcacaggggga
ggcctcttctccacccagagcaatgccttcgcccagaacaagccggtggggtttggcaat
tttgggacaagcaccagcagtggaggattgtttggcaccactaacacagcctccaatcca
tttgggggcacatctggctccctttttggggctacaagcttttccaccgtccctactggc
accacgattaaattcaatgcaccaaacggtacggacaccatggtcaagtctggtgtcagc
accaacatcagcaccaagcatcagtgcatcaccgctatgaaggagtatgaaagcaaatca
ctcgaggagctccgtttggaagactaccaggccaacaggaaaggccccaccaacccagtg
ggagctggagccacgccaggcttatttggatcgtcaaccgctacgtccagcgcggccaca
ggactcttcggctcctccaccaccaacacaggattttcgtacggggcaagtaagacagcc
tttggaaccagtaccactggttttgggacaggaaccggaagtctctttggttcgaatcag
ccgacacccagcctcttcaataaaccttttggtcagcccaccaccgcccagaacacgggt
ttttcgttcaccaacaccagcacccttggacagcccaacacgaacacgatgggcttgttt
ggagctgcccagcccacccagaccggaagcatttttggcacagcagccaataccaacaca
gcagctgcgtttggaacaggaaccggactctttgggcagcccaacaccgggtttggtgtt
ggtggctcgtctctctttagtaacaagcctgctggctttggcaccacaaccaccagcgca
ccctcgttcgggacaacgacaactggacttttcgggttcaatgcaaacaccacaggaaac
agcctctttggaaacaagcctgcaaccggggctctgggtccaggcctcggggcgggattt
gggacagcccttaatccagggcagaattcactctttggcagcacgcagcccaagctaggg
ggcacgctggggacaggagcctttggtgcccctggatttaacacatcaactgccacattg
ggctttggagctccacagcctgctgtggctctgacagatcccaacgtctctgcggcccag
caggccgttctgcagcagcacctcaacagcttgacctactcacccttcggggactcgcct
ctcttccgaaaccccatgtctgacccgaagaagaaggaggagaggctgaagccaaccaat
ccggcggcccagaaggcactgaccaccccaacacattacaaactgactccccgcccggca
actcgtgtgcgccccaaagctttgcagacaagcggctcctccaaatcccaccttttcgat
ggtctggacgacgatgagccttctctgaccaatggggccttcatgcccaagaagagcatt
aagaagctggttttgaagaacctcaacagtggcagcctcttctctcccggcggtgctgaa
gtggatgacattgcctcgccttccatctatcctgagaacggggatcggtcggttagtgag
aaccatagacaggacgaggagcaggaagacgacagctactcccgggaaatgtccaggttc
ttaaccaacgtcattaccaagcccctgccccagactccagagaatgccccacacaagcat
cacaacaacagtgtggacgacaccctcctggccctgaatgtgcggccggcgctgcggaac
gggctggaaaacagcctggaggaagcttcctaccacgaggagtccctgcaggaggacctg
gacaaggagagcgaagaccagctccattccacccatccggcaggaattgtcttgacacga
atgggctactacaccattccctccctggaggagctagccagaatgaccagtgacatggga
gagtgcatcgtgaccgacttcactgttggccgtaaaggctacggctccatctacttcgag
ggcgaggtcaatgtgaccaacctgaacctggatgagatcgtgcacatccgcaggaaagag
gtcatcgtgtacccagatgatgaattgaagccccccatcggggagggcttgaacaggcga
gccgaagtcaccttggatggagtttggcccacggacaaaacctcgcgttccgtgatcaag
agcccagaacggctgacagaaatgaactacgaaggccgactggaagccgcctctcggaaa
cagggagcccagtttaaggagtaccgccccgaaacgggttcatgggtattcaaggtggcc
cacttctcaaagtacggcctgcaagactccgatgaggaagatgaggacaacctagccaaa
gtggaggctaagaagttaaaaactgctcaggtgcctctgccgggccagcttatgtctcag
caaatggctgcagctgggaagttggcacctccttccaagagccccgaggctgaccatctg
gggaagggggtcgaattcgacagcgacatggcagacatcacccaagagctgcttcctgag
tccctggcggaagagaatctggtggaagaacaggagccagtgccggcctcgacccatatt
gcgtcctccctggacatcaaccctcacacgctgcagatcatgaaggcttctttgctggca
gatgaggaagaactggactggatgacggatccccagtttggcaaggcagctgccgaaatg
gacctttcccaagagatctgctctccgaggcttcccatctcctcctcctcacgaggatgg
aaaagtcgccccccaggcagcaggctgctgcagtcacgactctccaccggctctttcctg
ctcccaagcgcctccctccaggacagccgcagtccgaggacttcctcaatgggcggggct
ttgcccgccccgccttgggctgctctttctcccctggcctccgccttcgtcatgcctcgc
tcggctactgaaatgcccctgaagaccgtgggcatccgcaggcagccaggcctggtgccc
ctgaagaaatcgatcgcctacgggaaaggacggctgctgaaggacatggccctcttcatg
ggacgctccttccgggtgggctgggggcccaactgggttttggcccacggcggagaccgc
ttgagccccctgagcgagccagaagatcacggggaggccacagagtacggattcttgcca
gcccccgtggcacccaagcaggtctccgagtcccccttcaaggtccacctggagaagctg
accttggacggcaagccaaccgaccgcgtctacctcctcccgttagagatcaagctgaag
cacagcaccatccacctggatgacccctgccccttcctggcccccaaccccggcgtggca
accatccatgaatatgccgcctgggcctcggaggcgtcggaagacgcagaagaagaagaa
gaagcggtgttgagggcctggggcctggtctggcgcttgtgcgaggcgctctggggccgc
ctgaaagagctggaggggcgcctggaggagcccggggagtacgggctgctgctggagcgc
cggagggccttctcccactggctctcccggacggcggctgagcggatccaggaggaggtc
tcgctccggcagaatgacagccccgccgaggccgtcttcagctacctcaccgggaagcag
atcggcaacgcctgccgcctggctcagcagtctggggatctccgcctgtctctgctcctc
tcccagctggtgggcagccaggaggtccgggagctgttggccctgcagttggccgactgg
caccagctccaagcggacggcttcatccaggacgagcggctgcggattttctgcctcctg
gctggcaaaccggtgtggcagttatccgagaagagaaccatcaacgtttgttcccaactg
gactggaagcgctctctcggggtccacctgtggtacctgctgccttcgacggcccccctt
tcgaaggccctcagcatgtacgaagccgcattccaggtctccccagacggagagagatac
gcgtgccctccgctgcctccctacctagaagactcgggctacgtggtggagaacgacaac
gcacaacgcccgctgcgagacgtgtgtttccacttgctgaagttgtatagtgacaggtgc
tacgacttacatcaactgctggacccccgcagcatcaccgcagaccccttggaccaccgt
ctcagctggcacctgtgggaagcactccgagccttgaattacacccacctgtccgagcag
tgccagggggtgctgaacgccagctacgcagcccagctggagagggaggggctgtgggag
tgggccgtcttcgtcctgcttcacacctccaacgctcaaacgcgggaaagagccgtgcgg
gagctgctgaaccgtcactgcaaactgctggagttgcccgagtccagggacaaggaggcc
ttcctgacgcagaagctgtgcgtccccccggagtggatctacgaggcgaaggccctctgg
gcccggagggagggggacaagacctgcgaggccctctgcctcttcaaggccggccactgg
aaccagtgccaccagctggtggtcaggcacttggcttctgacgccatcattaatgagaat
tacacctacctgaagggattcttggaagacctggccagtcccgagcgctgcagcctcatt
cagggttgggacaccgccgggctggttttcttggactacctccaggtcatcgagatggtc
agcaggattcagcagctggactgcaccggctatgagctggaggagatccactccaaagtg
atctccctctgcagcaggatagagctggtccaatgtcacggtgccaaggacaggctggct
cagtcggaaatggccaagcgcaacgcagacatcctccgagtggtgctgagcttgcagcac
cctccggatacggcctccggcgccacccccgacgtgcagagggtccccctgcgcctgctg
gccccccacatcagccggctccccatgccggaagactacgcgctggaggagctccgcggg
ctgacccagtcctaccttcgggaactgatggtggtggcccagtga
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integrated database retrieval system
