Pantherophis guttatus (corn snake): 117677491
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Entry
117677491 CDS
T07329
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117677491 (MEX3D)
04121 Ubiquitin system [BR:
pgut04121
]
117677491 (MEX3D)
Enzymes [BR:
pgut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117677491 (MEX3D)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117677491 (MEX3D)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117677491 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
KH_DEAH11_2nd
zf-C3HC4
RING_XB3-XBAT31
WRNPLPNID
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117677491
NCBI-ProteinID:
XP_034293619
UniProt:
A0A6P9DEA4
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MPSAIYQLDGEASRCCPPPGLGGLLTPQIAQQPACSGSSFALPAGLQQPSLEPPSPPLLQ
EALAPRDPAAELSLALEQLSILGLAAEEEEEEEEEGEGGREEEEEEAAAKEDGGGGGGPR
PEDDLMEAGDPGGLDPFSYHGLPPLAAAPPSGVGLVLLEAEGSPPASNSVSPVEILGAFP
PHLGHPPPPQHPLLAGQLGIIGSRKKSVNMTECVSVPSSEHVAEIVGRQGCKIKALRAKT
NTYIKTPVRGEEPIFIVTGRKEDVEMAKREILSAAEHFSVIRATRNKVNGMAGSVLAPPN
LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDR
AREEIEAHITMRTGSFIDININNDFHSNGTDVCLDLMGGNPSSLWSKAPHPTRRTVPSLR
NDSLGSSGSATSATEPYFGGHVAESPPTGSFVSNNSSYSFSEPPAPGLGSDDGDFGFDFL
ALDLTTPTTIWSPFEAPSNPLQVFSSSSTSSVNGNAQRRNSTLSTTATPRHSPTLPDPSV
ALEHPLARRIQSDPVSTLSWLPAQGSMSSFSNSTGYSSSSPLPSSISATSGSPTDSNSSE
RARKNSRECMVCFESEVIAALVPCGHNLFCMECAMRICGRVEPQCPACHAPATQAIHIFS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgccatctaccagctggatggagaagcctcccgctgctgccccccgcctggc
ttgggcgggctgctgaccccccagatcgcgcagcaaccggcttgttccggcagcagcttc
gccctgcctgccggcctccagcaacccagcctggagccgccttccccgcctctcctgcaa
gaagccttggcgccccgagaccccgcggccgagctttccttggccttggagcagctttcc
atcttagggctggcggcagaggaagaggaggaggaggaggaggaaggagaaggcgggaga
gaagaggaggaggaggaggcggcggccaaggaggatggaggaggaggaggaggaccacga
cccgaggacgacctgatggaggcaggtgatccaggagggctggaccctttcagctaccat
gggctgccccctctggcagcagcgccgccctcaggtgtgggcctggtcctgctggaggcc
gagggcagccccccagcctccaactccgtctcccccgtggagatcctcggggccttcccg
ccccacctgggacaccctcctccgccacagcatcccctgctggccgggcagctgggcatc
atcggcagccgcaagaaaagtgtcaacatgacggaatgcgtctcggtgcccagctcggaa
catgtggcagaaatcgtgggccgtcaaggatgcaagatcaaagccctgagagcgaaaact
aacacttatatcaaaacaccagtgagaggagaagaacccatttttattgtgacgggccgg
aaagaagacgtggagatggccaagcgagaaatcctttcggctgccgaacacttctccgtg
atccgggccactcgcaacaaagtcaacggcatggctggctcagtcctggcccctccgaat
ctccccgggcagaccaccatccaagtacgggttccttaccgtgtggtcgggctagtggtg
ggcccaaagggagccaccatcaagcgcatccagcaacagacacacacctacatcgtgacc
ccgagtcgggacaaggaaccggtgtttgaagtgacgggcatgccggagaatgtggaccgg
gcacgtgaggagatcgaggctcacatcaccatgaggacgggctccttcatcgacatcaac
atcaacaacgactttcattccaacggcactgacgtttgcctcgacttgatgggtggcaat
ccgtccagcctgtggtcaaaagcgcctcaccctacccggcggactgtgcccagtttacgc
aacgatagccttggttcctcgggtagtgctacctcggccaccgagccttacttcgggggc
catgtggctgaaagtccccccacgggctcctttgtttccaacaacagcagttactcattc
agcgaacccccagctcccggactgggctctgatgacggtgattttgggtttgactttttg
gccttggacctcaccacgccaaccaccatctggtccccctttgaagctcccagcaacccc
ctccaggtcttcagcagttcttccacctcctcagtgaacggcaacgctcagagacgcaac
agcacgcttagcaccaccgccacacctcggcattcacccacccttccagaccctagcgtg
gctctggagcatcctttggcccgccgcatccagagcgatccagtcagtaccctgtcctgg
ctgccggcccagggctccatgtcatctttctccaacagcaccggctactcatcctcttcc
ccgttaccaagcagcatctccgctacttcgggctcgcctactgattcgaacagttcagaa
cgagctcgcaagaattcccgcgagtgcatggtgtgctttgagagcgaagtgattgctgcc
ctcgtgccctgtggccataacctcttctgcatggagtgtgccatgcgcatctgtggccgg
gttgagccccagtgccctgcctgccacgcaccagccacgcaagccatccatattttctca
tag
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