Pantherophis guttatus (corn snake): 117677743
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Entry
117677743 CDS
T07329
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03015
mRNA surveillance pathway
pgut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117677743 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117677743 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117677743 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117677743 (SYMPK)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117677743 (SYMPK)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117677743 (SYMPK)
U7-dependent histone pre-mRNA processing factors
117677743 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
HEAT_MROH2B_C
Adaptin_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
117677743
NCBI-ProteinID:
XP_034294051
UniProt:
A0A6P9DEJ0
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MANTSGVGDPGLLRMSIASQFFSGEETAETDTMTTSEKVVDLLNQAALIINESKITILKQ
VQELIINKDPTLLDNFLDEIIAFQADKSVEVRKFVIGFIEEACKRDTELLLKLIANLNML
LRDENVNVVKKAILAMTQLYKVALQWMVKSRVINEMQEACWEMVSAMSNEIIQLLDSDND
GIRTHAIKFVEGLIITLSPRMPESEVPKRHENDISLDRVPTDHTYIKYNALWEEGKAALE
QLLKFMVHPAISSINLTAALGSLASIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSV
RKNLKLHLLSVLKHPASVEFQAQITTLLMDLGTQQAEITRNMPNLKELRKRPRDDSDPTL
KKMKMEPALEEDDEDKDLEQGTVPSPKPSIQSSTQSDIDITAEFLQPLLTPDNVANLVLI
SMVYLPENMPASFQATYTPVESAGTEVQIKHLARLMATQMTAGGLGPGVEQIKQVKEAVK
GEKIPKPEGVLIKRRLSTLNLGQAISVVGAASPASPSTEIPQAKRRPEPIIPSTQPRLVG
ASGRKKIFRLSDVIKPLADAQKEKLKLAAVKRILRSEKAVAYSGAAHARVKILSSLVTQF
EVPLKQEIMAFILDDIRNRLDLAFAWLYQEYNVYLSQYPTGSLNNYDECLIGLLSGLQEK
PDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFEYLHV
LLDLSSHEKDKVRQQALLFIKRMYEKDHLREYVEKFALNYLQLLVHPNPPSVLFGADKDT
EVAAPWTEETIKHCLYLYLALLPQNHKLIHELASVYTEAIADIKRTILRVIEQPIRGMGM
NSQELLKLVKNCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYNKRLPDVRFLIPVLN
GLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSTVSPLNPGELLIALHNIDSTK
CDMKSIIKATNLCFAEHNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLGGFV
MNILSRLILKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFEKCPELREPLL
AHVRSFTPHQQAHVPNSIMAILEATNKQEMEGKELQPLDEGRGPAPPRTKTLRREREEDA
EPQPLLPRVSQDMIALRLAQEKALKRQLEEEQKLKQQQQQQQQPQARPAGPPTPPPAEEL
VDLPEDVPEAETPTIFISMQEEEESFGGESSLLDSSLEGPWPTKELLSKEGGGGNSSSDE
GSSSKTPAPAQPTPAPEEPAKDSQAAEAGTDSPSEEPPAAPSKSGTEEEEKMEC
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacaagtggggtgggagaccctggccttctacggatgagcattgcctcccag
ttcttttcgggggaggaaacggcagagaccgacaccatgaccacgtcagagaaagttgtg
gatttgctgaatcaagctgccttaatcatcaacgagtctaaaatcacgatccttaaacaa
gtccaggaattgataataaacaaggaccctaccttgctggataacttcctggatgaaatc
atcgctttccaggcagataagtccgttgaggtgcggaaatttgtaattggattcatagag
gaagcctgcaaacgggacacggagctgttgctcaagctcattgccaacctgaacatgctg
ctgagggatgagaatgtcaacgtagtgaagaaggccatcctggccatgacccagctatat
aaggtggccttgcagtggatggtgaagtccagggtgatcaacgagatgcaggaagcctgc
tgggagatggtctcggccatgtccaacgaaatcatccagctgctggattccgacaatgac
gggatccgcactcatgccattaagtttgtggaggggctgatcatcaccctctcgccccgt
atgccggaatcggaggtgcccaagcgacacgagaacgacatcagcctcgaccgggttccc
acggaccacacgtacatcaaatacaatgccctgtgggaggaagggaaggcagcgctcgag
cagcttctgaagttcatggtacacccagccatctccagcatcaacctgacagcagccctg
ggctccctggcctccatcgcccggcagcggcccatgttcatgtcagaggtgatccaggcc
tacgagacgctgcacgccaacctccctcccacgctggccaaatcccaggtgagcagcgtc
cgcaagaacctcaagctccacttgcttagtgtcctgaagcacccggcttccgtcgagttc
caggcccagatcactaccctgctgatggacctgggcacccagcaggctgaaatcacccgc
aatatgcctaacctgaaggagttacgcaaacgccctcgggatgacagcgaccccacattg
aaaaaaatgaagatggagcccgcccttgaggaggatgacgaggacaaagacctggagcag
gggacggtgcccagccccaaaccctccattcagagcagcacgcaatcagatatagacatc
acagccgagtttctgcagcctcttttgactccggataacgtggccaacttggtgctgatc
agcatggtgtacctcccagagaacatgccggcgtccttccaagcgacgtacacaccagtg
gaatccgctgggactgaagtccagatcaagcacttggcgcggctgatggccactcagatg
accgcaggtggcctggggccgggagtggagcagatcaaacaggtcaaggaagccgtcaaa
ggagagaagatacccaagccggaaggcgtcttgatcaagcgacgcctttccacccttaac
ctcggccaggccatctccgtggtgggagctgcaagcccagcttctccctccacggagatc
ccacaggccaagcggcgcccggaacccatcattccttccacccagccaaggctggtgggc
gccagtggccgcaagaagatcttccgcctgagcgacgtgatcaagcctctcgcggacgcc
cagaaggagaagctcaaactggcagctgtcaagcggatcctgcgctccgagaaggccgtg
gcttacagtggggcggcccacgcccgggtgaagatcctttcctccttggtgacccagttt
gaggtccctctgaagcaggagatcatggccttcattctggatgacatccgtaaccggctg
gacctggcctttgcctggctctatcaggagtacaacgtttacctgagccaatatcccacc
ggctccctcaacaactacgacgagtgtctcatcggcctcctctccggcctgcaggagaag
cccgaccagaaggatgggatcttcaccaaggtggtcctcgaagcccccctgatcacggag
agcgccctggaagtcatacgcaagtattgtgaagatgagagccggacatatctgggcatg
tcgaccctccgcgatctgatcttcaagcgcccgtccaggcagtttgaatacctgcacgtc
ctgttggacctcagctcccacgagaaggacaaggttcgtcagcaggccctcctcttcatt
aagcggatgtacgagaaggaccacctgcgggaatatgtggagaaatttgccctgaattac
ctgcagctgctggtccaccccaaccccccttccgttctctttggcgccgataaagataca
gaggtggccgccccctggaccgaagagaccatcaagcactgcctctacctctacttggcc
ctccttccccagaaccacaagctgatccacgagttggcctctgtctacaccgaggccatt
gcggacatcaagcgcaccatcctcagagtgatcgagcagccgatccgtgggatgggcatg
aactctcaggagctgctgaagctggtgaagaactgccccaaaggagccgagactctggtg
acccgttgcctccacagtctgaccgataaagttcctccatctccagagctcgtgaaacgg
gttcgagatctctacaacaagaggctcccggatgtccgattcctcatcccagttctcaat
ggcttggaaaagaaagaggtgatccaggctttgcccaaactcatcaagctgaatcccatc
gtggtgaaggaagtgtttaaccggctcctgggaacacaacatggtgaaggaaattcgacg
gtttcccccctcaatcctggggagctgttgatcgccctgcacaacatcgattccaccaag
tgtgacatgaagtccatcatcaaagcgaccaacctgtgctttgctgagcacaacgtctac
acctcggaggtgctggctgtggtgatgcagcagctgatggagcagaaccccctgcccatg
ctcctcatgcggacggtcatccagtcactgaccatgtacccccgcctgggcggctttgtc
atgaatatcctttcgcgcctcatcttgaagcaggtgtggaagtaccccaaagtctgggag
ggcttcatcaagtgctgccagcgtacgaagccccagtccttccaggtcatcctccagtta
cccccacagcagctcagtgccgtctttgaaaagtgcccagagctgagagagcctctgctg
gctcatgtccgctccttcaccccccatcagcaagcccacgtccccaattccatcatggcc
attctggaagccaccaacaaacaggaaatggaaggcaaagaacttcagcccctggatgag
gggaggggccctgctccacccaggacgaagaccctgagaagagagagggaggaagacgcg
gagccccagcctctgctgcctcgggtgtcccaggacatgatcgccctgcgcctggcccag
gagaaggccctgaagcggcagctggaagaggagcagaaactcaagcagcagcagcagcag
cagcaacagccacaggctcgccctgctggcccccccacccctcctcctgctgaagaattg
gtggacctcccggaagacgtgcccgaagccgagacccccaccatcttcatcagcatgcag
gaggaggaggagagttttgggggggagagctccctgctggattccagcttggaaggaccc
tggcccaccaaggagctgctcagcaaggaaggaggcggtggcaacagcagctcagacgag
gggtcctccagcaagacccctgcccctgcccagcccacccctgccccagaagaaccggcc
aaggacagccaagcggcagaggccggcacagacagcccttcggaggagcccccagcagcg
ccatccaagtccggcactgaggaagaggagaagatggagtgctga
DBGET
integrated database retrieval system
