Pantherophis guttatus (corn snake): 117677757
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Entry
117677757 CDS
T07329
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117677757 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117677757 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117677757 (SUPT5H)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117677757 (SUPT5H)
RNA polymerase I system
117677757 (SUPT5H)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
117677757 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW5_SPT5
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
Arabino_trans_N
DUF3912
Motif
Other DBs
NCBI-GeneID:
117677757
NCBI-ProteinID:
XP_034294075
UniProt:
A0A6P9DSD8
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MSDSEDSNFSEDESERSSEPEEVEENEAEERASVVGSEKEEAEEEEEEEEEEYDEEEDED
DDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGA
RRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTV
KCKIGEERSTAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGV
GNLRMGYWNQQMVPIKEMTDVLKVVKEMTNLKPKSWVRLKRGIYKSDIAQVDYVEPSQNQ
ISLKMIPRIDFDRIKARMSQKDWVAKWKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFE
GNRYSRKGFLFKSFAMMAVITDGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQP
GDNVEVCEGELINLQGKILSVDGNKITIMPRHEDLKDMLEFPAQELRKYFKMGDHVKVIA
GRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHELGELVLL
DPQTVGVIVRLERETFQVLSMNNQLVTVRHQAVNRKKDNRFAVSLDSEQNNIHVKDIVKV
IEGSHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTKHLILAGGSKPRDVTNVTAGGF
VPMSPRMNSPMHPSSGGPRGGFGGGGMNRGRGRRDNDLIGQTVRISRGSYKGYIGMVKDA
TESTARVELHSTCQTISVDREHLTIVDSKKPSGMPSGYGRTPMYGSQTPMYGSGSRTPMY
GTQHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNTPSRPEEEFDYGFDDEPTPSPQGYGG
TPNPQTPGYPDPSSPQVNPLYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSFHQ
VAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGCSPMTPGAPSPGGYNPHTPGSGIE
QSSSDWVTTDIEVKVHDTYLDSHVVGKTGVIRSVNGGMCSVYVKKCEKVVSISSEHLEPV
TPAKNDKVKVLLGEDREGTGMLLSIDGDDGIVRMNPEEQLKILNLRFLGKLVEA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgaagacagcaacttctccgaagatgagagcgagcgtagcagcgagcct
gaggaggtggaggagaacgaggcagaagagcgggccagcgtcgtaggaagcgagaaagaa
gaagcagaggaggaagaggaggaggaagaggaagaatacgacgaggaggaagacgaagat
gatgatcggcctgcaaaaaaacccagacatggaggctttattttggacgaagctgatgtt
gatgatgagtatgaagacgaagatcagtgggaggatggagcagaggacatcctggaaaaa
gaagaaatcgaagcctccaacattgacaatgtggtgctggacgaagaccgttccggagcc
cggagactgcagaacttgtggagggaccaaagagaagaagagctgggcgagtattacatg
aagaaatatgccaagtcttccgtgggcgagactgtgtatggtggctccgatgagctttct
gatgacattacacaacagcagctgcttccgggagtcaaggaccccaatctttggacggtg
aaatgtaagattggagaggagcgttccaccgcgattgccctgatgaggaagttcatcgcc
taccagttcacggacacacccttgcagatcaaatcggtggtggctcctgagcacgtgaag
ggctatatctacgtggaggcttacaagcagacccacgtcaagcaggccatcgaaggggtg
ggcaacctccggatgggctactggaaccagcagatggtgcccatcaaggaaatgaccgac
gtcctgaaggtggtgaaagagatgaccaacctcaagcccaaatcttgggtgcgactcaag
aggggaatctacaaaagcgacatcgctcaggtggattacgtggagccaagccagaatcag
atttcgctcaagatgattccgcgcatcgatttcgatcgcatcaaagctcgaatgagccag
aaagattgggtggcgaaatggaagaaattcaagcgtcccccacaacggctcttcgatgcg
gaaaagatccgatctttgggtggtgacgtggcctccgatggggatttcctcatcttcgaa
gggaatcgctacagccggaaagggttcctcttcaagagcttcgccatgatggctgtgatc
accgatggagtgaagcccactttgtccgagctggagaaatttgaggaccagcctgaaggg
atcgacttggaggtggtgaccgagagcacagggaaggaacgggaacacaacttccagccg
ggagacaacgtggaggtgtgcgaaggggagttgatcaacctgcaggggaagatcctgagt
gtggacgggaacaagatcaccatcatgcccaggcacgaagacctcaaggatatgctggag
ttcccagctcaggagctgcgcaaatacttcaaaatgggagatcacgtgaaggtcatcgcc
gggcgctttgagggcgacacagggttgattgtccgtgtggaggagaacttcgtcatcctt
ttctctgacctgacgatgcacgagctcaaagttctcccccgagaccttcaactctgctcc
gagacggcctctggtgtggatgtgggtggccagcacgagctgggagaactagtgttgctg
gacccccagaccgtcggggtcatcgtgcgtctcgaacgggagaccttccaggtcctgagc
atgaacaaccaactggtgactgtgcggcatcaggcggtgaatcggaagaaggacaatcgc
ttcgcggtctccctggactcggagcagaacaacatccacgtaaaggacattgtgaaggtc
atcgaaggttctcattcgggccgcgagggggagattcggcacctcttccggggctttgct
ttcctgcactgtaagaagctggtggagaacggagggatgttcgtctgcaagacgaagcac
ttgattctggcggggggctccaagccccgggatgtcaccaacgtcacggctggtggcttc
gtgcccatgagtccacggatgaacagccctatgcatcccagctctggagggccacggggc
ggctttggcggtggcggaatgaaccgaggccgtgggcgcagggataacgacctcattgga
cagacggtgcggatttcccgagggtcttacaaaggctacatcggtatggtcaaggatgcc
acggaatccaccgccagggtagagctgcactccacatgccagaccatctcagtggatcgg
gaacatctgacgatcgtagattccaaaaagccatctggcatgccctctggctatggacgg
acccccatgtatggatcccagacacctatgtatggctcgggctcccgcacacccatgtat
gggacccagcatgatggaaaccggacgccgcactacggttcccaaacacccttacatgat
ggcagccggacacctgcccagagcggcgcctgggatcccaacaccccttcgaggccagag
gaagaatttgactatggtttcgacgacgagcccacgccttctccccaaggctatggagga
acccccaacccacagactccaggctatccagacccttcttccccgcaggttaatcctctg
tacaaccctcagacgcccggaaccccagccatgtataacaccgaccagttctctccgtac
gccgtcccgtctcctcagggctcctaccaaccgagtcccagccctcaaagtttccaccaa
gtggcacccagccctgtgggctaccagaacacccactcacctgccagctaccacccgact
ccttcgccaatggcttaccaggctagccccagccccagcccagtgggctgtagccctatg
accccgggggctccttccccaggaggttacaaccctcacacccctggctccgggattgag
cagagctccagcgactgggtcaccaccgatatcgaggtcaaagtgcacgacacgtacctg
gacagccatgtggtggggaagaccggagtcatccgtagcgtgaatggtgggatgtgttcg
gtctacgttaagaaatgtgaaaaggtagtcagcatttcaagcgaacacctggaacctgtg
acaccagccaagaacgataaggtcaaagtcctcttgggagaagaccgcgaagggacgggg
atgttgctgagcattgatggggacgatggcatcgtccgcatgaacccagaagagcagctc
aaaattctcaacttgcgtttcctgggcaaactcgtagaagcttag
DBGET
integrated database retrieval system
