Pantherophis guttatus (corn snake): 117678155
Help
Entry
117678155 CDS
T07329
Symbol
FXR1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117678155 (FXR1)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117678155 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
117678155 (FXR1)
mRNA cycle factors
Stress granule specific factors
117678155 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
117678155
NCBI-ProteinID:
XP_034294806
UniProt:
A0A6P9DQY8
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MEELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFSEVRLPPPPDIKKEIG
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKP
VSKNTFFRCAVDVPEDLREACANESAHKDFKKAVGACRIFYQAETAQLVVLSASEATVKR
VGILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELEEDTGTFRIYGESAEAVKKARSYLEFVEDFIQVPRSLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYTTDESNPSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGDEDREALHQRDSRRRPPGGRRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHTTNRRRRSRRRRT
DEDAALMDGMTESDTASVNENGLDDRDKKTQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNLPKETLAKNKKETVKEVIEEVGLSEKAVNGPAVVSGTESSKQQHSPEEKPST
IQEDGNKQEEAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgacggtggaagtgcgaggctccaacggggccttctataagggattcatc
aaagatgttcatgaggattcactcacagttgtgtttgaaaacaattggcaaccagaacgc
caggttcctttcagtgaagtaagattaccaccaccacctgatatcaagaaagaaattggt
gaaggagatgaagtggaggtttactcaagagcaaatgaccaagagccatgtggctggtgg
ctggcaaaggttcgaatgatgaaaggggagttttatgtcattgagtatgctgcttgtgat
gccacttacaatgaaatagtcacatttgaacgacttcggcctgtgaatcagaataaacct
gtgagcaagaatacattcttcagatgtgccgtagacgttccagaagatctgagagaggcg
tgtgctaacgaaagtgctcacaaggattttaagaaagctgtaggagcctgcagaattttt
taccaggctgaaacagctcaattagtagttctgtctgccagtgaggcgacagtaaagaga
gtgggcatactcagcgacatgcatttacgtagcattcgaaccaagttaatgctcatgtca
agaaatgaagaagcaacaaagcatttagaatgcacaaaacagcttgcagcggcatttcat
gaagaatttgttgtcagagaagacttaatgggacttgcaataggaacacatggcagtaat
atacagcaagccaggaaggtgccaggcgttactgcaattgaacttgaagaagatactgga
actttcaggatctacggcgagagtgctgaggcagtaaaaaaagctagaagctatttggaa
tttgtggaagactttattcaggttcctaggagtcttgtagggaaagtaattggtaaaaat
ggcaaagttattcaagagattgtggacaagtctggagtcgtgcgagtgagaattgaagga
gacaacgagaataaactacccagagaagatggaatggttccatttgtgtttgtgggtact
aaagaaagcatagggaatgtccaagtacttcttgaataccatattgcctacttaaaggag
gtagaacaactacggatggaaaggctccagattgacgagcagttacgtcaaattggcatg
ggttttagaccttcgtctaccagaggccctgagaaggaaaagggttataccactgatgaa
agcaacccttcgtctgtacaaggctcaaggtcctatagtggaagaggcagaggccggagg
ggccccaattacacctctggatatggaacaaattctgagctatctaatccctctgagacg
gaatcagaaagaaaagatgaactgagtgattggtcactagcaggggatgaagatagagag
gccctacaccagcgtgacagccgaaggcgcccaccaggaggaagacgtagtgtttctggg
ggtcggggccgaggtggtccccgaggtgggaagtcatctatcagttctgtgctgaaagac
ccagacagcaatccttatagcttactcgataacacagagtctgaccagactgcagatact
gatgcaagtgaatcgcatcacaccacgaaccgacgcaggcgatctcgcagacggaggact
gatgaagatgctgccttaatggatggcatgacagaatctgacacggcgtcagttaatgaa
aatggcttagatgatagagacaaaaaaacccagcgacgcaatcgtagtcgcaggcgtcgc
ttcaggggtcaggcagaagatagacagccagttacagttgctgattatatatcaagagca
gaatctcagagtagacaaagaaacctcccaaaggaaacactggctaaaaacaagaaggaa
acggtgaaagaggtgattgaagaggttggcctttctgaaaaagcagtaaatggcccggca
gtggtttctgggactgaatcttccaagcagcaacatagtcctgaagaaaagcctagtact
atacaagaagacggaaataaacaagaagaagctgtgttgaatggtgtttcataa
DBGET
integrated database retrieval system
