Pantherophis guttatus (corn snake): 117678353
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Entry
117678353 CDS
T07329
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04382
Cornified envelope formation
pgut04510
Focal adhesion
pgut04512
ECM-receptor interaction
pgut04518
Integrin signaling
pgut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117678353 (COL4A3)
04518 Integrin signaling
117678353 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117678353 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117678353 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117678353 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgut04147
]
117678353 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pgut00536
]
117678353 (COL4A3)
Exosome [BR:
pgut04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117678353 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pgut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117678353 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117678353
NCBI-ProteinID:
XP_034295251
UniProt:
A0A6P9DS41
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MERLVRPQTWHLGLAFVSMLALGGWEQVGFPTAVAAKNCICNSKNQCFCDGIKGSKGEKG
FPGYPGLPGQMGFHGPEGPPGPQGPKGFSGTVGPAGAKGSRGKPGVPGYSGPPGLPGEPG
NAGPHGAPGIPGCNGTKGEPGFPGLLGHGGLPGLPGSKGIKGEKGTSENGFNKGYSSSKG
NPGLPGVPGSQGKPGLQGFPGTIGPQGPSGFPGTVGRRGPQGPKGIMGIDVIGSRGIKGD
CGLIGPPGPSGTVIITLTGAENTTGLKGDKGDQGSPGHPGPPGEPGLYGDSSTIKGDPGD
PGHQGRAGKNGGPGSPGPRGEKGEKGLLGLPGEVGTKGIKGEVGPMGNKGLTEYYDGMPG
AKGNKGFLGSPGPKGQRGPVGLQGPLGTIGSPGISRPGLRGVPGSPGLKGKKGERGQPGI
NAIGPQGHPGFPGPPGPVGSVGPLGQPGTITFEEGPQGTPGSPGCIGPPGLLGDDGEKGE
ESGPCTECTYIMGQPGHAGVAGAEGQQGRKGVEGILGPKGSPGFPGHPGPPGDQGFTGLP
GSKGLKGPKGDANLMHPEGPKGDNGEPGIRGNTGEKGLDGIPGKPGQKGKKGSAGTQGPD
GPKGDRGLPGSVGSPGLPGKIGLTGSPGYGPQGRNGSKGSQGNPGLPGLPGVPGSKGEPA
RVKAIPGAPGLQGIEGTPGLQGRRGNMGSRGQRGDPGLPGKDGDPGLAKNGFPGCSGQKG
DKGSQGPKGIPGSLGKAGKPGLPGLPGVPGEKGELGPVIPGQQGSLGLPGEEGKLGEKGE
RGSSGLPGPAGQKGFEGADGPKGELGGPGAPGEKGLPGKIGLCLIGLPGTPGQCGVMGPQ
GKKGTIGAKGDPGIPGLDIPGFPGRFGLPGLQGPGGNKGLPGIKGQRGKPGMPGTPGFRG
ERGLMGHLGSPGLPGVSGNPGTPGGRGSPGFPGPKGRKGSFGEKGEPGDKGPPGLSESKE
IYGDKGERGSKGPPGRTGLKGEKGQQGVQGCVGPVGPPGTLPPPGAKGAKGLSGIPGIYG
LPGVPGDRGDMGMPGHKGEQGSSGVPGSPGIAGPPGFTGIPGDKGEPKPGTGPPGNPGPK
GNPGLLGERGRKGASGSPGHPGLIGVPGLPGIRGDTGLPGITGQPGPVGSKGIKGSKGLP
GQNGVRGLPGPIGLSGENGLVGEKGNQGHDGIYGPPGETGEQGSPGQQIPGPKGLPGPKG
IKGDMGVDGFPGPQGFQGVMGDQGPGGPPGLPGPPGLPGKPGRILNLKGNRGPPGPDGNP
GLPGSPGPAGVPGYSIKGNKGVQGTDGIPGLPGMKGDDGPPGMPGIEGSPGYQGLDGELG
FPGLPGIKGEKGNRGPPGPTGIAGTRGPKGLPGQPGAFVKAVSFPGSPGPAGPPGNPGSS
GDPGPRGSPGLPGPPGSMGQSGRHGTPGRTGPPGPKGEKGFQGQKGLPGLLGSPGIKGLP
GFPGSCITSPVKRGFIFSRHSQSTNIPTCPSGTTHIYNGYSLLFVQGNEQAHGQDLGTTG
SCLSRFTTMPFLLCNTQAVCRFASRNDYSYWLSTETPMPEDMAPISGRALESYISRCVVC
EGPAMMIAVHSQKTSVPSCPQGWQSLWKGFSFVMYTGAGSEASGQALASPGSCLEKFRAL
PFIECHGRGTCNYYSNSYSFWLATLNSRRMFRKPVPQTLKAENMEKIISRCQVCMRKPN
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctcgtgcgcccccaaacctggcacttggggctcgccttcgtttccatgctg
gctttgggtggctgggagcaggtcggctttcctaccgctgttgccgcgaagaactgtatc
tgcaacagcaaaaaccaatgcttttgtgatggaataaaaggcagtaagggagaaaagggc
tttcctggttaccctggtctacctggtcagatgggcttccatggcccagaaggtcctcct
ggaccacaaggacctaagggtttttcggggacagtaggtcctgctggagctaaaggttca
aggggtaaaccaggagttcctggttactctggtcctccaggtcttccaggtgaacccgga
aatgctggccctcatggagctccaggtataccaggatgcaatggaacaaagggtgagcca
ggttttccaggactcttgggacatggaggacttccaggattaccaggttctaagggcatc
aaaggagaaaagggaacttctgaaaatggattcaataaaggttacagttcttctaaaggt
aatcctggattgccaggagtgcctggatctcagggtaagccgggacttcaaggatttcct
gggacaattggacctcaaggcccttcaggttttccaggcacagtaggaagaagaggacct
caagggcccaagggtatcatgggtattgatgttattggatccagaggaataaagggtgat
tgtggcctaataggtcctcctggaccatctggaacagttattataacattaactggagca
gaaaatacaacgggattaaaaggagataaaggagaccaaggttctccaggacatccggga
cctccaggagaaccaggtttatatggtgattcctctactataaaaggagaccctggagac
cccggccatcagggcagggcaggaaagaatggtggtcctggctcacctggtccccgggga
gaaaagggtgagaagggtttgctaggattgcctggagaagttggaactaaggggataaaa
ggtgaagttggccctatgggaaacaaaggtctaactgagtactatgatggaatgcctgga
gcaaaaggaaataagggcttcttaggatctccaggacctaaaggtcagcgtggaccagta
ggactacaaggacccttgggtaccattggaagtccaggtatttcaagacctggtctaaga
ggtgtgccaggttctccaggcctcaaaggaaagaaaggagagagaggacaaccaggaatc
aatgctattggaccacaaggacatcctggatttccaggcccacctggcccagtaggatca
gtaggtcctttaggacaaccaggtacaataacttttgaagaaggtccacaaggaactcct
ggaagccccggatgtataggtcctccaggcctattaggagatgatggagaaaaaggtgaa
gaatcaggcccgtgtactgaatgtacttatattatgggacaacctggtcatgccggtgtt
gctggagcagagggtcagcagggtaggaaaggtgtggaaggaatacttggtcctaaagga
tccccaggatttcctgggcatccaggacctcctggagatcaaggttttacaggccttcca
ggaagcaaaggccttaaaggaccaaaaggagatgcaaacttaatgcatccagaaggtccc
aaaggagataacggagaaccaggaatcagaggaaacacaggagaaaaagggttggatgga
atacctgggaaacctggacaaaaaggcaaaaaaggttctgctggaacacaggggccagat
ggtccaaaaggtgacagaggattaccaggatctgttggcagcccaggtcttcctggtaag
atagggctaactggatcaccaggatatggaccccaaggaaggaatggctcaaaaggatct
caaggaaatcctggattgcctgggttaccaggtgtacctggttctaaaggagagcctgct
agagtaaaggcaattcctggagcaccagggcttcaagggatagaaggtacacctggatta
caaggaagaagaggtaacatgggatccagaggacaaaggggtgacccaggtcttcctgga
aaagatggagatcccggcttagcaaagaatggatttcctggttgttctggtcagaaaggg
gataaaggatctcaaggacctaaaggaatacctggttctctaggaaaagcagggaaacct
ggcttacctggcttacctggagtgcctggagaaaagggtgaactaggtccagttattcct
ggacagcaaggaagtcttggcttaccaggagaagagggaaagttgggtgaaaagggtgaa
agaggatcatcaggtttacctggacctgcaggtcaaaaaggttttgaaggggctgatgga
ccaaaaggggagcttggaggtcctggagctccaggagaaaaaggtcttccaggaaaaatt
ggcctctgtcttattggtttaccaggaacaccaggtcaatgtggagtaatgggaccacaa
ggtaaaaaaggaacaataggagccaaaggagatccaggtattccagggttagatatccca
ggatttccaggacgatttggacttcctggattacaaggccctggaggaaataaaggattg
cctggcatcaaaggacagcgtggtaaacccggaatgccaggcacaccaggtttcagagga
gaaagaggtttgatgggacacttgggtagccctggattgcctggtgtctctggaaatcca
ggaaccccaggaggcagaggttctccaggctttccaggaccaaaaggaaggaaaggatct
ttcggagaaaaaggtgaaccaggtgataaaggtcctcctgggctatcagaatccaaagag
atctatggagataaaggagagagaggcagtaaaggacctcctggaagaacaggactcaag
ggagaaaaaggtcagcaaggtgtgcaaggatgtgtgggtcctgttggaccaccaggtact
ctaccaccaccaggagctaaaggagctaaaggactttcaggaattcctggaatctatgga
ttgccaggagttccaggagacagaggggacatgggaatgccaggtcataaaggggagcaa
ggttcttcaggtgtgcctggatcaccaggtatagcaggcccacctggctttactggtatt
ccaggggataaaggagaacctaaacctggtactgggcctccaggaaacccaggacctaag
ggtaatccaggtcttcttggagaaaggggaagaaaaggggcaagtggatcaccaggccac
ccaggtcttattggagtacctggactacctggaatcagaggggatactggtttaccagga
attacaggacaaccgggacctgtgggcagtaaaggtattaaaggtagcaaaggactacca
ggacaaaatggtgttagaggacttccaggtccaattggattgtctggtgaaaatggatta
gttggtgaaaagggtaatcaaggacatgatggtatttatggtccacccggagaaacagga
gaacaaggttccccggggcaacaaattcctggccctaaaggacttcctggacctaaaggt
atcaaaggagatatgggagtagatggttttccaggaccacaaggctttcaaggtgttatg
ggagaccaaggacctggtggacctcctggtttacctggaccaccaggacttccaggaaaa
ccagggagaatacttaacctcaaaggaaatagaggtcctcctggcccagatggaaatcca
ggtcttcctggtagcccaggacctgctggagtcccaggctacagcataaaaggaaacaaa
ggtgtccaaggaacagatggaattccaggcctgccaggaatgaaaggtgatgatgggcca
cctggtatgccaggaattgaaggtagccctggttatcagggccttgatggtgaacttggc
tttccaggattaccaggaataaaaggagaaaagggcaatcggggaccacctggaccaact
ggaatagcagggactcgagggccaaaaggactacctggccagcctggagcatttgtgaaa
gcagtttctttcccaggaagcccaggacctgctggacctccaggaaacccaggaagctca
ggagatcctggtccccgtgggtcacctggtctcccaggacctcctggttcaatgggccag
tcaggccgtcatggtactccaggtagaactggaccacctggacccaaaggagaaaaagga
tttcaagggcaaaaaggtttacctggattgcttggatctcctggtataaagggacttcct
ggattcccaggaagttgcataactagtccagtgaaaagaggctttattttttcccggcac
agtcagtcaacaaacattcctacatgtccatctgggacaactcacatctataatggctac
tctcttctttttgttcaaggaaatgaacaagcacacggacaagacctcggtacaaccggc
agctgtctttcaagatttactactatgccctttttattatgtaatacccaagcagtctgc
agatttgcttctcgcaatgattactcctactggttgtcaacagaaacaccaatgcctgaa
gatatggcaccaatttctggaagagctttagagtcctatattagcagatgcgttgtctgc
gaaggtccggcaatgatgatagcagtccacagtcaaaaaacttcagttccatcctgtcct
caaggctggcaatctctttggaaagggttttcttttgttatgtatacgggtgcaggctca
gaagcttctggacaagctttggcatctccagggtcatgcttagaaaaatttcgtgccctt
ccattcattgaatgtcatggccgaggaacatgtaattactactcaaattcctacagtttc
tggttggctacactaaattcaagaagaatgttcaggaaaccagtgccacagactctaaaa
gctgaaaatatggaaaaaataattagtcgctgtcaagtctgcatgaggaaacccaactga
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integrated database retrieval system
