Pantherophis guttatus (corn snake): 117678665
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Entry
117678665 CDS
T07329
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117678665 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117678665 (TAF5)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117678665 (TAF5)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117678665 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
117678665 (TAF5)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117678665 (TAF5)
STAGA complex
117678665 (TAF5)
TFTC complex
117678665 (TAF5)
SAGA complex
117678665 (TAF5)
SLIK complex
117678665 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_VPS8
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
DSE1_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
PAC11
Beta-prop_Aladin
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
ASA1
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
DNAI3_WD
eIF2A
Tricorn_2nd
CDK5RAP3
RAB3GAP2_N
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
117678665
NCBI-ProteinID:
XP_034295895
UniProt:
A0A6P9DXU3
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MAALPEEPTEAVAVKPDPDAGAPPPAPPAPLSQSPISTAAAVATTVPPASASSVAATLLA
DGEPLAGGVDSKSSGTSSPTPPASQLPIHKHTLLAVLQFLRRSNLRESEEILRREARGLV
DDVPSDPNSSAPGVPGAHGGEGQDPSAGILAPGAGDVLINSVTFGQTGATISPAAITTPP
AAPLGHPGKAGVLVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQ
LFYPLFVHMYLELVYNGHENEAKSFFQKFHGDQECYYQDDLRVLSSLTKKEHMRGNETML
DFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGS
LAGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSLGSKSKKQD
PNAPPQNRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTSVDV
TDDSSMIVGGFADSTVRVWSVTPKKLRSVKSATDLSVIDKESDDVLERIMDEKTASELKI
LYGHSGPVYGASFSPDRNYLLSCSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGY
YFVSGGHDRVSRLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLN
GNCVRIFTGHKGPVNSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHSDTIYALK
FSRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMTKST
PVLHLHFTRRNLLLAAGAYSPQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttgccggaggagccgacggaggcagtagcggtaaagccggatcctgatgca
ggagcgccgccgcccgctccgccagctcctctctcccagtccccgatctcgacggcggca
gcagttgcaacaactgtccctcctgcgtctgcctcttcggtcgctgccacccttctcgcg
gatggagagccgcttgcgggaggagttgactcgaagagctcggggacttccagccccacg
ccgccagcctctcaactacccatccacaagcatactctgctggcggtgctgcagttcttg
cgccgcagcaatctgcgcgaatcggaggagatcctccggagggaagcccgtggtctcgtc
gacgacgtcccaagcgacccgaattcctcagctcccggggtccccggagctcatggaggg
gaaggacaggatcccagtgccgggatcttggcccctggagcgggggacgtgctaatcaat
tctgtcacttttggccagactggagctaccatctctccagccgctatcacgacacctccc
gcagcgcccttgggccatcctgggaaagctggagttcttgtagaagatcagccagatgtg
agtgcagtactatctgcttataatcaacagggagacccagcactttatgaagaatactac
agtggattgaaacacttcattgaatgtgctctggattgtcatcgagctgaattatcacaa
cttttttatcctctgtttgtacacatgtacttggaactagtctacaatggacatgaaaat
gaagcaaaatcgttctttcaaaagtttcatggggaccaagaatgttattaccaagatgac
ttgcgtgtactatccagtttaaccaaaaaagagcatatgaggggcaatgagactatgctg
gatttccgaacaagcaagtttgtgttgcgtatttctcgtgactcttaccagcttctgaag
agacatcttcaggaaaaacagaacaatcagatctggaacattgttcaagaacatctttat
attgatatttttgatggaatgcctcgtagtaaacaacagattgatgctatggtgggaagt
ttagctggcgaagcaaaacgagaagcaaataaagcaaaggtattttttggcttattaaaa
gaaccagaaattgagttacctttggatgatgaagatgaagagggagagaatgaagagggc
aagccaaagaaaaagaagcccaaaaaagatagtttgggatcaaaaagtaaaaagcaggat
ccaaatgctccacctcagaatagaatccctcttcctgagctaaaagattctgataaactg
gataaaataatgaatatgaaggaagctactaaacgtgttcggcttggtccagactgtttg
ccttctatttgcttctacacgtttcttaatgcataccagggtcttacatctgtggatgtt
acagatgactctagcatgatcgttggaggctttgctgattccactgtcagggtatggtct
gtgacacccaaaaagcttcgcagtgtaaaatcagctacagatctcagtgtcatagataaa
gaatctgatgatgttttagaaagaatcatggatgaaaaaacagcaagtgaattgaaaatt
ttatatggtcatagtggacctgtctatggtgctagctttagtcctgataggaactatttg
ctgtcatgttcagaggatggcacaatcagattgtggagtcttctaactttttcttgtttg
gtgggatacaaaggacataattatcctgtatgggacacacagttctctccatatggatat
tattttgtatctggtggccatgacagagtatctcgtttgtgggctacagatcactatcag
cctttgcggatctttgctggtcatctggcagatgtcacatgtacacgttttcacccaaac
tccaactacattgccacaggctcagcagacagaactgtgaggctttgggatgtacttaat
ggaaactgtgtacgaatattcacgggacataagggaccagttaattcgttagcattttct
cctaatggacgattcttggcaactggagcaactgatggaagagtgcttctgtgggatatt
ggccatggtttaatggtaggagaattaaaagggcactcagacacaatttatgcactcaaa
ttcagtagagatggagaaatattagcttcaggttcaatggacaatacagttaaactttgg
gatgctgtgaaagcttttgaggacttggagacagatgattttacaacagccactggacac
ataaaccttcctgaaagttcacaggacttgcttctgggcacatatatgaccaaatcaact
ccagttttacacctccactttactcgaagaaatttacttcttgctgctggggcttatagt
cctcagtaa
DBGET
integrated database retrieval system
