Pantherophis guttatus (corn snake): 117679071
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Entry
117679071 CDS
T07329
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117679071 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
117679071 (SKIC3)
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117679071 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_12
TPR_17
TPR_16
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
BTAD
ARM_TT21_C
ARM_TT21_2nd
Fis1_TPR_C
TPR_30
TPR_5
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
117679071
NCBI-ProteinID:
XP_034296588
UniProt:
A0A6P9DLJ9
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MSSKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPEQAQ
GAYKKAAELDPGQLLAWQGLANLYEKRNHTDVKEDWIKVYEKLLELYENTDQQKWCEVCK
KLVELYHKDKQYLQVVRSWHKLIKIRKEGGAENVELHQLWKKLVQLLEEGIQLKDNEIEQ
LFLNAFEEAINSSEPVPGEEHKKLYREFLQTVSKFPHESSRMKKACKEMMVVYPNMSYPL
EVLCLHFIQSGNLTEEALGCCQKLLDIDSRSGPALIILGIQSLQERNYNGAEKKLSEGLQ
QFNQCPVGWCNLGEVQMKMHKYQEAVHSCNQALKSLEQLNDLSFIQQQKNIAQHFRARAF
IKIPGANYADEAISSLNQILDKNNDPKLIALRGQAYLKKDLTDEASKIVKELQLAHPDLA
EAHFLEGLIRYRQKEYHQAEMSFQRAIAKEGEIAEFHFWLGLTYWFMNEETRKDKSKALT
QFLKAAKLDNFLGDAFHYLGQYYRDVAGDKNRALGCYKKAFERDKTDGVTGAAVVDLSTE
LGDLETALAILTEVTEQASAGRAKWAWLRRGLYYLKVGQHSQAVADLQAALRGDPKDPNC
WEALGEAYLSRGGYTTALKSFRKARELNPKSIYSIYKAAAIEQILGKYKEAIAEYQHILE
KSKDYVPALKGLGECYLMMAKSALANYLDGKALDYIEQSLEFLARAAKYRPEVSCLWKLL
GDACNCVCVISPSKVNVKVSGFLFGQNIEKCVLQKSDLLSLGGRCYGRGLKLMSSPNTWC
DLGINYYNQVQHLTAADSNQNEISELLEKSIQCLKKAVRLDSKNHLYWNALGVVASCKGV
GNYALAQHAFIKSIQADQINVVAWTNLGVLYLTSGKIEQAHEAFKIAQSLEPSHLICWIG
QAFVAETVGSYETMDLFRHTTELSMHTEGAKGYAYWVCSTLQDKTNRNTELYKYNILQMN
AIPTAQVALTKYTERIQNDACAFTMLGYLNEYLQLKKQAADTYQRSVLLLTNSEDRERYN
IVMRNYGRSLCALGQCDDAIKAYLATHLIEFDDIVGIALSYFKKGNFQESQKAYEKALAI
ADSEQDKAYILTALAIIEYKQNRVDAAKTVLFKCSILQEPNMESLQALCSLGLIKQDATL
ATAALKELLKHTGKKDDVYKRCLLATAVYALQGRHLAVQRQVSKAVHSHPDNPALWSLLS
RLVPRYVPQNAKGGAVAGNIACILDLNHGKKALLNTAVNQLATGCHKAENKKNILKAVHL
SPDDPTAWAVLLAACHAENTVVHLHNKQSKQTHLEKMIVTAISAKTKAKELPASRAQEIE
EWSLFQAITGLNEAGRTSEAEALCEKGLKIFPEQPMWYLLLRQVQCKPLLQSHKELPDAI
LEELRKAVLSNSTLITAWHWLAQVYQSQGMMVGAEMCYRKSLKLASQQGNLSGKLCSLLR
LAKLALEICMANVSNDHWPSLVQEATTEAMKISFCPLGILFQALMQYNRKMGSRETRRML
ERVVYQSGFPETVVSVARWYLLRHLYAKDDYELIDALTANAKANGDIRVLELDKKLSAAA
S
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaggaagtaaaagcagcattgaaaagtgccagagatgcaataagaaataag
gagtataaagaagcactgaaacattgcaaggcagtattgaaacaagaaaaaaataattac
aatgcttgggtattcattggcttggcggcggctgaattagaacaacccgaacaagctcaa
ggtgcatataagaaggctgctgaacttgatccggggcagttgctggcatggcagggctta
gcaaatttgtatgaaaaaagaaatcatacagatgtcaaagaagactggattaaggtttac
gaaaaactactagaactctatgaaaacactgatcaacagaaatggtgtgaagtatgtaaa
aagcttgtggagctgtatcataaagataaacaatatcttcaggtggtacgaagctggcac
aaactaataaaaataagaaaagaaggaggtgcagaaaatgttgaacttcatcagctttgg
aagaaattggtccagttgctagaagagggcatacaacttaaagataatgaaatagagcaa
ttgttccttaatgcatttgaagaggcaatcaattcttcagaaccagttccaggtgaagag
cacaaaaagctttacagagaattccttcagactgtatcaaaatttcctcatgagtcttct
agaatgaagaaggcctgtaaagaaatgatggttgtctatcctaacatgagttatcccctg
gaagttctttgcttacacttcattcagtcaggtaacttgactgaggaggccctcggttgt
tgtcagaaacttttggatattgattcaagaagtggtccagctctgatcattttagggatt
cagtctctccaagaaagaaattacaatggggctgaaaaaaagctttcagaaggtttgcag
caattcaaccagtgtccagtaggatggtgtaatttaggagaggtgcaaatgaaaatgcat
aaataccaagaagctgttcattcctgtaatcaagctttaaagagcctggaacaacttaat
gacctaagtttcattcagcaacaaaaaaatattgcccaacatttcagagcaagagccttc
attaaaattccaggcgctaactatgctgatgaagccatatcttccctcaatcagatctta
gataaaaataatgatccaaagcttatagctcttagaggacaggcctacctaaagaaagac
cttactgatgaagcttcaaagatcgtgaaagagcttcaattggcacatccagacctggca
gaagcccatttccttgaaggattgatacgttataggcaaaaggagtatcatcaggcagaa
atgagctttcagagagctatagcaaaagaaggtgaaatagctgagttccatttttggctg
ggcctcacttattggtttatgaatgaggagacaagaaaagataaatcaaaagccctcact
cagtttctgaaggcagcaaaactggacaatttcctgggagatgctttccattatttaggt
caatattacagagatgtagctggagataaaaatagagctcttggctgctataaaaaggct
tttgaaagagataaaacagatggtgttactggagcagcagtagtggacttgagcactgag
cttggagacttggaaactgccctcgccatcttgacagaggtaacagaacaagcaagtgct
gggagagcaaaatgggcctggcttcgccgaggactttattatctaaaagtgggacaacat
tcacaggcagtggcagatttgcaagcagctctgcgaggagatccaaaggaccccaattgt
tgggaagctctaggagaggcctatctgagtcgaggaggctacacaacagccctgaagtca
ttccgaaaggcaagagaactcaaccccaagtctatatatagtatttataaggctgctgca
attgaacaaattcttggaaaatataaagaggccattgcagaatatcaacatattttggag
aaatcaaaagattatgtccctgcgctgaaaggtttgggagagtgttatctcatgatggca
aagtctgctcttgctaactatctggatgggaaagctttggactatatagaacaatcactt
gaatttttggcacgggcagcaaaatatcgtccagaagtatcctgcctttggaagttgctt
ggagatgcctgtaattgtgtatgtgttatttcaccatccaaagtgaatgtgaaagtttca
ggtttcctttttggccagaacatagaaaaatgtgtgctccaaaaaagtgatctgctcagt
cttggtggaagatgttatggtcgaggactgaaactgatgtcttcaccaaatacatggtgt
gatcttggaataaattattataaccaagtgcagcatcttacagccgcagacagtaaccaa
aatgaaatcagtgaactgttagagaaatccatacagtgcctgaaaaaagcagtgcgatta
gacagtaaaaaccatctctactggaatgctcttggtgtggtagcctcttgcaaaggtgtt
ggaaactatgctcttgcacaacatgcattcattaaatctattcaagctgatcaaattaac
gttgttgcctggaccaatctgggagttttgtatttaacaagtggaaaaatagagcaagcg
catgaagctttcaaaatagcccagtctctggaaccctcccatctaatctgttggattgga
caggcctttgttgcagaaactgttggcagctatgaaacaatggatctcttcagacacacc
actgaactcagcatgcatacggaaggtgcaaaaggctatgcctactgggtgtgctcaacc
ttgcaagataaaaccaacagaaatactgaactatataagtacaacatccttcagatgaat
gctattccaacagcacaagttgctttaactaaatatacagaaagaatccagaatgatgca
tgtgctttcacaatgcttggttatttgaatgaataccttcagctgaaaaaacaggcagcg
gatacatatcaaaggtcagttctattgctgacaaattctgaagacagagaaagatacaat
atagtgatgagaaattatggaagatcactctgtgctcttggccagtgtgatgatgccatc
aaggcttatttggcaactcatctgatagaatttgatgatattgtaggaattgctctgtct
tacttcaagaaaggaaatttccaagaaagtcagaaagcttatgaaaaagcacttgccatt
gcagactctgagcaagataaagcatatatattaacagccctcgcaataatagaatacaaa
caaaatcgagtggatgctgcaaagaccgtcttatttaaatgttctatattacaggagcct
aatatggaaagcctgcaggccttgtgcagtttagggctgatcaagcaggatgcaacactt
gcaaccgcagcacttaaagaactgttaaagcacacagggaaaaaagacgatgtttataag
aggtgccttcttgcaactgctgtctatgcattacaaggcagacatctggctgttcaaaga
caagtttctaaagctgtccacagccacccagataatcctgccctgtggtccctgctgtca
agactggtccctcggtatgtgccacaaaatgccaagggtggagctgtggcaggaaatatt
gcttgtattcttgatctaaatcatgggaagaaagccttgctgaatactgctgttaatcaa
ctggccacaggatgtcacaaagctgaaaacaaaaagaatattctaaaagcagttcatctt
tccccagatgatcctacagcttgggctgtactcttggctgcttgccatgctgaaaacaca
gttgttcatctgcataataagcaatccaagcagacacatctggaaaaaatgattgtcact
gcaatctcagctaagactaaagccaaagaacttccagcttccagagctcaggaaatcgaa
gaatggtctcttttccaagctattactggcttaaatgaggcaggtagaacttcagaagct
gaggctctctgtgaaaagggattaaaaatttttcctgagcagccaatgtggtacctgctg
ttaagacaagttcaatgcaaaccacttttgcagtctcacaaagagcttcctgatgccatt
ttggaagagctccgaaaggcagttctctccaactccacattgattacagcttggcattgg
ttggcacaagtctatcagtcacaaggaatgatggttggtgcagaaatgtgttaccgaaaa
agtctaaaattggcatcacagcaagggaacttgagcggaaaactctgtagtcttctaaga
cttgctaaacttgccttagaaatctgtatggctaatgtttcaaatgatcactggccatct
ctagttcaagaagccaccacagaagctatgaaaatttccttctgtcctctgggtattcta
tttcaagcacttatgcagtataatcgcaaaatgggttctcgagaaacacgtcgtatgtta
gagagagtggtatatcaatctggatttccagaaactgtagtatcagttgcacgatggtat
ctcttaagacatttatatgccaaagatgattatgaattaattgatgctcttacagcaaat
gccaaagctaatggagatattcgagttttggaattagacaagaaactctcagcagcagcc
tcctag
DBGET
integrated database retrieval system
