Pantherophis guttatus (corn snake): 117679092
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Entry
117679092 CDS
T07329
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117679092 (CHD1)
03036 Chromosome and associated proteins [BR:
pgut03036
]
117679092 (CHD1)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117679092 (CHD1)
Chromosome and associated proteins [BR:
pgut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117679092 (CHD1)
SLIK complex
117679092 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
117679092
NCBI-ProteinID:
XP_034296627
UniProt:
A0A6P9DLF4
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MNGHSDEESTRNTSGESSQSDDDSGSASGSGSGSSSGSSSNGSSSRSGSSDSDSGSESGS
QSESESDTSKEKKVQAKHPKVDGAEFWKSNPSILAVQRSAMLRKQQQQSKATSINSGSEE
ESSSSEDSGDDSSNEIKRKKHKDEDWQMSGSGSISGTASDSEIEESRDKSSCEESESDYE
PKNKVKSRKPPSRIKQKSGKKTSVQKKRQLDSSSSSSDDDDDYDKRGSRRQATVNVSYKE
AEEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGATTTIYAVEADGDPN
AGYDKSKESGDMQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLK
NASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE
DGALIAKKFQSRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPNYIGGHENLELRDY
QLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTS
WQREIQTWAPQMNAVVYLGDITSRNVIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLG
GLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ
YYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQNLI
RSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEIRK
QALDHFNAEASEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
KQVNIYRLVTKGSVEEEILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEE
LSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENETGPLSVGDELLSQFKVANF
SNMDEDDIELEPEQNSRNWEEIIPEVQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNG
NEGRRCRNRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGP
LERLDAIARDAELVDKSEIDLRRLGDLVHNGCFKALKDNSSGQERAGGRLGKVKGPTFRI
SGVQVNAKLVISHEEELEPLHKSIPSDPEERKRYTIPCHTKAAHFDMDWGKEDDSNLLIG
IYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDIARKEAQR
LSGIGGSKRRKLRMKKSKIIKAIKMKEELKSDTSPPPSDKSDEEEEEDSKDEMVSLKNPS
KIKMEKENEENLDADIALKKQADEKRESKENKKEQKREKKEKEDKKDMKEKDMKEKRESK
GKEYSHKEKEVKEEKTNDYKSDSKDKIKKNPSADTPVHITASGEPVPISEDSEELDQKTF
SICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQW
RKNLWIFVSKFTEFDARKLHKLYKHAIKKRQETQQYNEQNINSCVNTNLIRNPDVERLKE
NTNHDDSSRDSYSSDRYLSQYHDHHKDRLHGDSYKKSDSRKRPYSTFSNGKDHRDWDHYK
QDNRYYNDSKHRKLDDHRNRDHRLNLEGSFKDSRSHLDHRIHLDHRSSSDYSHHKSSRDY
RYHSDWQMDHRASSSGPRSPLDQRSPYDSRSPLGHRSPFDHSTDHKSTPEHMWSNRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcacaaggaacactagcggagaatcaagccaatca
gatgatgattctgggtcagcgtctggatctggatctggttcaagttctggaagcagtagc
aatggaagtagcagccggtcaggaagcagtgattcagattctggttcagagtctggcagt
caatcagaatcagagtctgacacatccaaggaaaagaaagtccaagctaaacatccaaag
gttgatggagctgagttttggaaatcaaatccaagcattctcgctgtacagaggtctgca
atgctcaggaaacagcaacagcagtcaaaagcaacatccataaatagtggatcagaagag
gaatcatcaagtagtgaggattctggagatgactcatccaatgaaatcaagaggaagaaa
cataaagatgaagattggcaaatgtctggatcaggatctatttcgggaacagcttcagat
tctgagatagaagaaagcagagataaaagtagttgtgaagagagtgaatctgattatgaa
ccaaaaaataaagtcaaaagcagaaagcctccaagcagaataaaacaaaaaagtggaaag
aaaacttcagtgcagaaaaaaagacaacttgactcatcatcatcatcatcagatgatgat
gatgattatgataaaagaggttctcgccgccaggcaacagtaaatgttagttataaagaa
gctgaagaagcaaagacggattcagatgatctcctagaagtctgtggagaggatgttcca
cagcctgaagaagatgaatttgaaacaattgaaaaatttatggatagtcgcgttggacga
aaaggagcaactggtgctacaaccactatctatgcagttgaagctgatggagatccaaat
gcaggatatgataaatcaaaagaatctggtgatatgcagtatttgattaaatggaaaggt
tggtcccatattcataatacctgggaaactgaagaaactctaaagcagcagaatgttaga
ggaatgaagaaactggacaactataagaaaaaggatcaggaaactaagcgttggctgaaa
aatgcttctccagaagatgtagaatattacaactgtcagcaagagcttacagatgacttg
cataagcagtatcaaattgtagagagaattattgcccattctaatcagaagtcagcagca
ggttatccagattattattgtaaatggcaaggtctcccttactcagagtgcagctgggaa
gatggagctcttattgcaaaaaagttccagtcacgcattgatgagtattttagtagaaat
cagtcgaagactactccatttaaagattgtaaggttttgaagcaaagaccaagattcgtg
gctttaaagaagcaacctaattacattggaggtcatgaaaacctagagttaagagattat
caattaaatggactaaattggttagcccattcatggtgcaagggaaacagctgtattctt
gctgatgaaatgggtttaggcaaaacaatacaaaccatctcctttttgaattatttattt
catgagcatcagttgtatggacctttccttcttgtagtacctctttccacccttacatct
tggcaaagagaaatccagacatgggctccgcagatgaatgccgtagtttatttgggagat
attaccagtagaaatgtgataagaactcatgaatggatgcatccacagacaaaacgatta
aaatttaacatcttattgacaacctatgaaattctgctgaaagataagtcattccttgga
ggcttaaattgggcctttataggagtagatgaagcccatcgattaaaaaatgatgactcc
ctcttatataagacattaatagacttcaaatctaatcatcgccttcttatcactggaaca
cctctacaaaactccctgaaagagctgtggtccctgcttcatttcatcatgccagaaaaa
ttctcttcttgggaagattttgaagaagaacatgggaaaggaagggaatttggttatgca
agccttcacaaagaacttgaaccatttctgttgaggagagttaagaaagatgtagaaaaa
tctctgcctgccaaggttgaacaaattttaagaatggaaatgagtgcattgcaaaagcag
tattacaagtggattttaacaaggaattacaaagccctaagtaagggctcaaaaggcagt
acctcaggctttctgaatatcatgatggaactcaaaaagtgttgtaatcattgctacctc
attaagccaccagatgataacgaattctataacaaacaggaggccttacagaacttgatc
cggagtagtgggaagctaattcttttagacaagctgctgattcgcttacgagagcgtggc
agtagagtacttatattctctcagatggtgcggatgctggacatcttagctgaatatttg
aaatatcgtcagtttccctttcaaagactagatgggtcaataaaaggagaaattaggaaa
caagcattggatcattttaatgcagaagcctctgaggatttttgctttttactgtctaca
agagctggaggtctaggtataaatttggcatctgctgatactgttgttatatttgattct
gactggaaccctcaaaatgatctgcaagctcaggctagagcacacagaatcggacaaaaa
aaacaggttaacatttatcgtttagtgaccaaaggatcagtagaggaagaaattttggag
agagccaagaagaaaatggttttagatcatctagttattcagagaatggacactacagga
aaaactgtattacatacaggttccgcaccatctagctctgctccttttaacaaagaggaa
ctgtcagctattctgaaatttggtgctgaggaacttttcaaagaaccagaaggggaagaa
caggaaccgcaggaaatggacatagatgaaatattgaagagagctgaaacacgggaaaac
gaaactggaccattaagtgtgggagatgaattgctctctcagtttaaggtggccaacttt
tctaatatggatgaagatgatattgaattggagcctgaacaaaattcaagaaattgggaa
gaaataattccagaggtccagagacgaagattagaagaagaagaaagacaaaaggaattg
gaagaaatttatatgcttccaagaatgagaaactgtgcaaaacaaataagttttaatgga
aatgaaggaagacgttgtagaaacagaagatattctggatcagacagtgactctgtctca
gaaagaaaacgaccaaaaaaacgtggaagaccacggaccattccccgggaaaacattaaa
ggatttagtgatgcagagattcggaggtttatcaagagttacaagaaatttgggggacct
cttgaaagattagatgccatagctagagatgctgaattagtggataaatctgagatagat
ctccgacggcttggagaccttgtacataatggatgcttcaaagctttgaaagacaactca
tctggacaagaaagagcaggaggtagacttggaaaagttaaaggcccaacattccgaata
tcaggggtacaagtaaatgcaaaattggtcatctcacatgaagaagagctggaaccattg
cataaatccattccttcagatccagaggaaaggaagagatacaccattccttgtcacact
aaggctgctcattttgatatggattggggtaaggaagatgattccaaccttctaataggc
atttatgagtatggatatggtagctgggaaatgataaaaatggacccagatctcagcttg
acacacaagattctaccagatgacccagataagaaaccccaagccaagcagttgcagacc
cgtgcagactacctcataaaattattgaataaggacattgcaagaaaagaagcacaaaga
ctttctggaataggaggttccaagagaagaaagttaagaatgaaaaagagcaagattata
aaagcaataaaaatgaaagaggagttaaagagtgacacatcaccaccaccttcagataag
tctgatgaagaggaagaagaagatagcaaggatgaaatggtttcattgaaaaatccaagt
aagataaaaatggaaaaagaaaatgaagaaaatcttgatgcagatattgctttgaaaaag
caggctgatgaaaaaagagaaagtaaggaaaataaaaaggaacaaaaaagggagaaaaaa
gaaaaagaggacaagaaggacatgaaagaaaaagatatgaaagaaaagagggaaagcaaa
ggaaaagaatactcccacaaagaaaaagaagttaaagaagaaaagacaaatgattataag
tctgacagcaaagacaaaataaaaaaaaacccttcagcagacacacctgttcatataaca
gcaagtggtgaacctgttcctatatcagaagattcagaagagttggatcagaaaacgttc
agtatatgcaaagaaagaatgaggcctgtcaaagcggcattgaagcagctggatagacca
gagaaaggtctttcagaaagagaacaactagaacatactagacagtgtctcataaaaatt
ggagaccatataactgaatgtctaaaagaatacacaaatcctgaacaaattaaacagtgg
agaaagaatttgtggatttttgtttccaaatttactgaatttgatgccagaaaactacac
aaattgtacaaacatgcaattaaaaaacgccaggaaacacagcagtataatgaacaaaat
atcaatagctgtgtgaacacaaatttgattagaaatccagatgtggaacggttaaaagag
aacacaaatcatgatgacagtagtagggacagttattcctctgacagatacttatcacag
tatcatgatcatcacaaagacagacttcatggagattcgtacaaaaaaagtgattcaaga
aaaaggccttattccactttcagcaatggaaaagatcatagagattgggatcattataaa
caggataatagatactacaatgatagtaaacatagaaagttagatgatcacagaaataga
gatcacaggttgaatctggaaggaagttttaaagacagtcgatcacatttagatcaccgg
atacatttagatcatcgatccagttcagactacagtcatcataaatcttcaagagattat
aggtatcactcagattggcaaatggaccacagagcttccagtagtggacccagatcacca
ttagatcaacggtcaccttatgattctcgatctcctttaggacatagatctccttttgac
cattcaacagatcataaaagtacaccggaacatatgtggagtaatcggaaaacatag
DBGET
integrated database retrieval system
