Pantherophis guttatus (corn snake): 117679354
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Entry
117679354 CDS
T07329
Symbol
VCAN
Name
(RefSeq) versican core protein isoform X1
KO
K06793
versican core protein
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04514
Cell adhesion molecule (CAM) interaction
pgut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117679354 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117679354 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgut00535
]
117679354 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
pgut00536
]
117679354 (VCAN)
04091 Lectins [BR:
pgut04091
]
117679354 (VCAN)
Proteoglycans [BR:
pgut00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117679354 (VCAN)
Glycosaminoglycan binding proteins [BR:
pgut00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117679354 (VCAN)
Lectins [BR:
pgut04091
]
C-Type lectins
Lecticans
117679354 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_TEN
ig
cEGF
EGF_CA
Motif
Other DBs
NCBI-GeneID:
117679354
NCBI-ProteinID:
XP_034297121
UniProt:
A0A6P9DX57
LinkDB
All DBs
Position
Unknown
AA seq
3125 aa
AA seq
DB search
MAGEEASFRVWKTQSGSGGKEVLGSGGFGEQVKMFKYFLWIYWTLSITCALRKVKVEKSP
PVKGSLSGRATLPCFFSTLPTLPPSYHNVSEFLRIKWSKIEQDIGGKDLKETTVLVAQNG
NIKIGQGYKGRVSVPSHPEDIGDASLTTVKLRASDAGIYRCDVMYGIEDTQDIVSLAVDG
VVFHYRSSTSRYTLNFKQAQEICLKNGAVIANPEQLKAAYEDGFEQCDAGWLSDQSVRYP
IRQPRVGCYGDMMGKEGVRSYGYRLSNETYDVYCYVGSINGDVFHVTSPNKVTFEEAQTL
CEEQGAVLASVGDLHAAWRNGFDQCDYGWLADGSVRYPASVARIQCGGGLLGVRTLYRFE
NQTGFPYPDSKFDAYCFKHKENVTDSSMVELNIPLESGSAKSLNELNVIPPKTTLHPYVS
SLTSEMVMVKQEKKAPRTINLSTLLPQTVTDISDLSKMTQTETVLSDLAEITPTQDISDL
HEASSESPIEQIEVSPIRTSVDVVARSNLSVPLETKEETHIGTQPTKIPVEAKSDNKFTT
VVIPKELLTSIYESVKKEDKEVLLPDQKLITSSTISKIDKIASSTAILDENATDTPDSVA
TSFESKIVSTPAYSTSFEIPVLTTTDKIRMVYSTDSVEKEEHTAAPVVSEKMKDTVTFIP
IPTTSDVFSGSEVSTGKGNLFGSESATRHMPVATNVNEIEGFFTSYGPEVSSYHLITPTP
DLQQETIETDAKYDWTNEENTTEQQPIFDISREDDPAMVTEGIEIKQPFIFTDTTKTATP
VAISEKDYSSSLISDTVENEISKGSGIVTTRSALTKTVTEVIPVIQQESVTRDLIMQTLV
TDPASPTVPVLYSLPEHDVAAEGSAYEINYTITDTSPGIKIRDYDTVTQSELSPGIIDPK
LIATGVPPIESTTKSEHRSSLDKLVVPLSREEAAPVTKKFDMEEVDTSTHSPEGSGIKEE
DVGMEPISFSVSATSKPMVVTGIATTVGTAIDKIPTTSASKPLIIKTQPPLIDREPDEDT
SKDVLIIDESVSPIKTTTDDDFTGKTVEPEIDTEYFTSSTITAVSQPTGPPTEVLESQEE
PPATSEVATENQSNIHVYVVAIPENDTDSLPGLWDLFGYHIPHELDEHPLDESTTEEPCT
ASPEDVGEDILIIDPFYPEIYHLDEDESEEVDCENTTAITTPPPLQFINGKQQVTTAPKD
IKAEEARSDQILAHSKNVNFLHINETNMVSDNEFLATIQPNESTGDTAATQKLRVEYDMM
EEVFSGDSETTHKVHEIIYLHGQSLSDNNEKLIQSETEHLEDLTAQPESISSASPHTTNM
ELKEDSEQLILTASTQDWLPHTTTVSLDPGDDITAQHDTSVLQGNYNTNVRHNILNSYIN
LLTTTSSTNLLNISEGSGAVQEDGYKSTSALIKPGRQEKHPSQDIFSSDGNPIPPKPMPS
ASQSSASLFKETMFIAEHSLVESFTTDSVTKIILSTTKNQINMEEDKKDSTSSMSLNMEN
STAVNTENLFNNNEYLSDNIRVVSEGSIAVTQTISPLKTKEITENRLSINEESGDGEFWR
KPNREILLGGPTSQVVSIDSQFLDAGFGRIDSITQATTQTSFPVRSEYGSSKGKEIGSNS
SEPPLNHAIHTTSNHTMDVLDAELYGEATDTRIESQVSENETRASDKSEASVLLPFSDKS
VVETNKEVITTITIQEQTNFFETSSMTNISPDINVGMKLIPESRETDRTAQHSSSTAEDS
IVVTNNITLQKESSEFIVNEGMDSLQLEDRKNISPTTFAKTIDLVDIGSGEESVNDTSSM
MQENYTPTEKEINSKLPLIELGSGEVDSITYFSTKKPVSSEVLEQGSKNQIKNKSEEPSM
VFQHPLVTTLNISSTTIVTLVNQSITGEFVNKSKMEQEMPNVLETRASDKTPHLEAEMYY
EENRKIIETESVTQQSGISGTSKFNPHAKELQFDINSVTESLQKYSPSYDKTASTLLIKA
EKEEWLEEKTNPAKDSHTLPPPSTMYRPITTATNVPFLSKQGSENEFFMVHTTAPGNSAT
LKESSNALKLDTLLPKSSEELFSEEQHEEFEKHTDDSKSMLEDDLSSASDETFPVLPVVH
SEASTINWFISEDDQNKEKSYQGEQNVLAATDGTSQGKAWMFVKHENKTSASKLFIEPPT
TGTIETPDTTLLSKVLNDGSGEGSGWQGVIEKKPESFTQLPNWELSLLTHPPHYSDIEST
GATMDASQKGPHTHTEKHEKTATSDSDISESFSYESSTNNIKDYEDLIPVAGFKRNYSDD
ISSFIDIIGTGHGVILDETTIIDVDNLKTNANIEDIIDHTTERPGRHSTYNIYTSAMKIQ
NTTPEMLIDDKITDNQRNSVGNKFIHSESMLSAHTPTLEVGSGDIAFFTTESAISQDPLK
TSILLPTLPLLVSSTISSPISSNENTTDVGYGIEYKESEEMIQSKSEPPTPSDNQIVADE
SEIITMSGGGQVQLDKQKPVVLPSTLAYMPLKTGQTLTTHQPKESTASNQLVSQNVTKSK
ETSYKVYEGMKTELTNSIETVMKNLVLTTQIPKLPVTVHFLNGVSEHPEEIMQSSSSSTD
SSKHGLPAPETFREVSADAAVTYKPVLEDLSNNTAFPNVELENSFLENITTSDGHVQETK
EMPKDATEKTTVFEEFLSKGVVPSSFFHSDTEDLLEEETPEKLKELNQLDGNSADGSLLW
IHSIPSSIPHESKTGGVFGADGEASVWPISPPPPADTIVKLQTAQPESTTISSNLVNEYS
GPESISDYNKQTINTEDVNANELVTPPFLLLDVTNGSDFLIGQGEGSVEGSAIQIPGQDL
CKSNPCLHGGTCYPRDSFYICTCMPGFSGDRCEVDIDECQSSPCRNGATCIDGVSTFTCL
CLPSYVGALCEKDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEE
QLFVNRIGHDYQWIGLNDKMYENDFRWTDGSVLQYENWRPKQPDSFFSSGEDCVVIIWHE
NGQWNDVPCNYHLTYTCKKGTVACGQPPVVENANTFGKMKPRYEINSLIRYHCKDGFIQR
HVPIIRCQGNGRWDLPKITCMNPSSFQRTYSKKYYYKNSSPGKVNSFNSSKHFHRWIRTW
QDSRR
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atggctggggaggaagcgtcttttagggtctggaagacacaaagcggctctggagggaag
gaggtgctgggaagcggcggatttggcgagcaggtcaaaatgtttaaatatttcttgtgg
atatattggaccttatccataacatgtgctctccgcaaagtgaaagtggagaaaagtcca
ccagtgaagggctcactctctggaagagccactctcccatgctttttttcaactttgcca
actttgcctccaagctatcacaacgtaagtgagtttctccggattaagtggtcaaagatt
gaacaggacataggtggaaaagatctcaaagaaaccacagtgttggtggcccagaatggg
aatatcaagattggacaaggctacaaaggaagagtgtcggttccaagccatccagaagac
attggcgatgcatcattgactacggtgaagttacgtgcaagtgatgctgggatttatcgc
tgtgatgtaatgtatggcattgaagatacccaagatattgtttcactggcggttgatggt
gttgtgtttcactatcgttcgtctaccagtaggtacactctgaattttaaacaggcacag
gagatctgtttgaagaatggtgctgtaattgcaaaccctgaacaactgaaagctgcgtat
gaagatggatttgagcaatgtgatgctggctggttgtctgatcaatctgttagatatcct
attaggcaacctagagttggctgttatggagatatgatgggaaaagaaggagttagatct
tatggatatcgcctttctaatgaaacttatgatgtctattgctatgttggaagcataaat
ggtgatgtctttcatgtaacttctcccaacaaggttacctttgaagaagcccaaactttg
tgtgaggaacaaggggcagttcttgcttcagttggtgatctgcatgctgcctggagaaat
ggttttgaccaatgtgattacggttggctggcagatggcagtgtgcgctatcctgcttct
gtggcaagaatccagtgcggcggaggtttacttggcgtgcgaacactttatcgctttgag
aatcaaactggctttccttacccagatagcaaatttgatgcatattgttttaaacataaa
gagaatgtaacagattcttcaatggttgaactgaatattcctttggaaagtggatctgcc
aaatcgttaaatgaactaaatgtaattcctccaaaaactacacttcatccttatgtatca
tcactcacttcagaaatggttatggtaaaacaagaaaagaaggcacctcggaccattaat
ttatctacccttctacctcaaactgttacagacatttctgatttgtcaaaaatgacccaa
acagaaactgtattaagtgacttagcggagattacacctacccaagatatttctgatctc
catgaggcaagttctgaaagtccaattgaacaaatagaagtaagtccaataagaacttct
gtggatgttgtagcaaggagtaacctgagtgtacctttagaaacaaaggaagaaacacat
attggcactcaacccaccaaaataccagtagaagcaaaaagtgataataaattcactact
gttgtcattccaaaagaattgctcactagtatttatgaatctgtaaaaaaagaagataaa
gaggttcttttgccagatcagaagctaataacatctagtaccatttctaagatagataaa
attgcatcttctacggcgatcttagatgaaaatgccacagatacaccagattcagtagca
acttcatttgaaagcaaaatagtatctaccccggcttattcaacgagctttgaaatacca
gtgcttacaacaactgacaaaattagaatggtatactcaacagattcagtagagaaggaa
gagcacacagcagcacctgtggtttcagagaagatgaaagatactgtgacttttattcca
atacccacaacttcagatgtattttcaggatcagaagtatcaacaggtaaaggaaacctg
tttgggtccgagtctgccacaagacacatgcctgttgccacaaatgtaaatgaaatagaa
gggttctttaccagctatggacctgaagtgtcaagttatcacctaataacaccaacacca
gatttgcaacaagaaacaattgaaacagatgcaaaatatgattggactaatgaggagaat
acaactgaacagcaaccaatcttcgatatttcaagagaagatgacccagcaatggttact
gaaggtattgaaataaaacaaccttttatttttacagataccacaaagactgcaactcct
gttgcaatttcagagaaagactatagcagttctttgatttcagacaccgtagaaaatgag
atttctaaaggttcgggtatagttactactcgttcagcactcacaaaaaccgtaacagaa
gtcattccagtgattcaacaggaatctgttaccagagatctaattatgcaaacattggtc
actgacccagcttcccccactgttccagtattatattcattacctgaacatgatgtagct
gctgaaggatctgcatatgaaataaattatactattacagatacaagtcctggtataaaa
ataagagattacgacacagtcacacagtctgaattgtctcctggaatcattgatcccaag
ctgatagcaacaggtgttcctcccatagaatccactaccaaaagtgaacataggtcttcc
ttggacaaattggtagttcccctctctagagaagaagctgctcctgtcactaaaaagttt
gatatggaggaagtagatacttcaactcatagcccagaaggatcaggaataaaagaagag
gacgtaggaatggaacccatttcattttcagttagtgcaacaagtaaaccaatggtggta
actggcattgccaccactgtcggtactgcgatagataaaatcccaacaacttcagcatcc
aaacctttaattatcaaaacacagccacctctgattgatagggagcctgatgaggataca
agtaaagatgtgctgataattgatgaatctgtttctcccattaaaactactactgatgat
gattttacaggcaaaacggtagagccagaaattgatactgaatattttacctcatcaact
atcactgcagtttcccagcccacaggaccacccaccgaggttttagaatctcaagaagag
cccccagctacttcagaggttgctacagaaaaccaatctaacatacatgtatatgttgtt
gctattccagaaaatgatacagattcattgcccggactttgggatttgtttggttaccac
atccctcatgaactagatgaacacccactagatgaatcaaccactgaggaaccctgtaca
gcaagtcccgaagatgttggtgaagatatcctcattattgaccctttctatcctgaaata
tatcatctggatgaagatgagagcgaagaagttgactgtgagaatactactgctatcaca
acccctccaccactgcagtttattaatggaaagcagcaagtgaccactgcacctaaagat
ataaaagctgaagaagcaagaagtgatcaaattttagcacattccaaaaacgtaaatttt
ttgcatatcaatgaaactaatatggtgtctgataatgagttcttggccacaatacagcca
aatgaatcaactggtgatactgctgctacacaaaagctaagagtagaatatgatatgatg
gaagaagtctttagtggagactcagaaactacacataaagttcatgagataatatatctc
cacggccagtccttatcagacaataatgagaaattgatacaatctgaaacagaacactta
gaagatttaacggcccagcctgaatcaataagttctgcttctccccacacaacaaacatg
gagctaaaagaagactctgaacagttaattctaacagcttctactcaagattggttacct
catactaccactgtatccttagatcctggagatgacataacagctcaacatgacacttct
gttctgcaaggaaattataatacaaacgttagacataatatacttaattcttatataaat
ttattgacaaccacttccagtactaatttgttgaatatatcagaagggtctggagctgtt
caagaagatggttataaatcaactagtgcattaataaaaccaggaagacaagaaaaacat
cctagtcaggatattttctcaagtgatggaaatcccattccacctaaacctatgccttct
gcttcacaatcttctgcttctttgtttaaagagaccatgtttattgctgaacatagtctt
gtagaatcttttactactgactctgttaccaaaataattttgagcactactaaaaatcaa
attaatatggaggaggataagaaagacagtacaagctctatgtctttaaatatggaaaat
tcaactgctgtcaacacagaaaacctgtttaataacaatgaatacttaagtgataatatc
agagttgtgagtgaaggatccatagctgtcactcaaacaatctctcctctcaaaaccaaa
gaaatcacagaaaatagattgtccattaatgaagaatctggtgatggagaattttggagg
aaacctaatagagaaatacttttggggggtcctaccagccaagtggtaagtattgactcc
caatttctagatgcaggttttggaagaattgatagtataactcaagccactacacagact
tcatttccagtgaggtctgaatatggaagcagtaaaggaaaagaaataggtagtaattca
agtgaaccaccattgaatcatgcaattcatactaccagtaatcatacaatggatgtgttg
gatgctgaattgtatggggaggctacagacactagaatagaaagtcaagtatcagaaaat
gaaacgagagcatcagataaatcagaggcaagtgtgctattgccatttagtgacaagtct
gttgtggagacaaataaagaagtgataacaactataacaatacaagagcaaacaaatttc
tttgaaacatctagtatgacaaacatttctcctgacatcaatgtaggaatgaagttaata
ccagaatcaagagaaactgataggactgcacaacattccagcagtaccgcagaggattct
atagtagtgacaaataacataactctgcagaaagaaagttctgaattcatagtaaatgaa
ggaatggactctcttcagttagaagatagaaaaaacatttctccaactacctttgccaaa
acaattgatcttgtggatataggctctggagaggaatcagttaatgacacaagtagtatg
atgcaggaaaattatactcccacagaaaaagaaattaatagtaaattaccattgatcgaa
ctaggttctggagaggtagattctattacatacttttctacaaaaaaaccagtttcatct
gaagttttggaacaaggatctaaaaatcaaataaaaaacaaaagtgaagaacctagcatg
gtatttcagcatccactggttacaacattaaacataagtagtaccactatagtaacatta
gtgaaccaaagtattacaggagagtttgttaataaatcaaaaatggaacaggaaatgcca
aatgtattggaaacgagagcttctgataaaaccccccatttggaagcagaaatgtattat
gaagaaaacagaaaaattatagaaacagaatccgtaacacaacagtcaggaatttctggt
acttctaaatttaatccacatgcaaaagaactacaatttgatattaattccgttactgaa
tcattacagaaatattccccttcatatgataaaactgcaagcactttattaataaaggca
gagaaagaagaatggttggaagaaaagactaatcctgccaaagacagtcacacacttcca
cccccatctacaatgtatagaccaataaccacagcaactaatgttccatttttgtcaaaa
caaggctcagaaaatgaattctttatggttcatactactgcacctgggaattctgctaca
ttaaaagaaagttctaatgcattaaaacttgacactcttcttcctaaaagttcagaagaa
cttttttcagaggaacaacatgaagaatttgagaagcatactgatgattccaaatccatg
ctagaagacgatttgtcttcagccagtgatgaaacctttcctgtgttacctgttgtacat
agtgaggcatctactataaattggttcatttctgaagatgatcagaataaagaaaaatct
taccagggagaacaaaatgtactagctgcaacagatggaacttctcaagggaaagcctgg
atgtttgtaaagcatgaaaataaaacttctgcttcaaaattatttatcgaaccccctact
actggaacaatagaaacaccagataccactttattatccaaagtgttgaatgatggttct
ggggaaggatctggctggcaaggcgtaatagagaaaaaacctgaatcatttacccagttg
ccaaactgggaactatcacttctaactcatcctcctcattattcagacattgagagcaca
ggtgccacaatggatgcatcccaaaaaggaccacacactcacacagagaagcatgaaaag
acagcaacatctgatagtgacatctcagagagtttttcatatgagagttccacaaacaac
ataaaagactatgaagatcttatccctgtagctggtttcaaaagaaattattctgatgat
atttctagcttcattgatattattggaacagggcatggagtaatacttgatgaaacaaca
attattgatgttgataatttgaaaacaaatgcaaatattgaagacattatagatcataca
actgaaaggcctggaagacactcaacatataatatttatacatcagcaatgaaaattcaa
aatacaacacctgaaatgttaattgatgataaaattacagataatcaaagaaattctgta
ggtaataagttcatacacagtgaatctatgttatctgctcataccccaacattagaggtg
ggttcaggagatattgcgtttttcacaacagaaagtgcaatttctcaggatccacttaaa
acatccattctgcttccaacactacctcttcttgtcagttctaccatatcatctccaatt
agttctaacgaaaataccactgacgtaggatatggcattgaatataaagaatctgaagaa
atgatacagtccaaatctgaaccaccaacaccatcagacaatcaaatagttgctgatgaa
agtgaaattatcaccatgtcaggagggggacaagtacagttggataaacagaaacctgtg
gttcttccttcaactctagcatacatgcccctaaaaacaggacaaactttgaccacacat
caacccaaagaaagtactgcttcaaatcagcttgtttcacaaaatgtaacaaaatctaaa
gaaacgagctacaaggtgtatgaaggaatgaaaactgaactcacaaattcaatagaaaca
gttatgaagaacttggttctcacaacacaaatacccaaactgcctgtgaccgtgcatttc
ctcaatggtgtttctgaacacccagaagaaatcatgcaaagttcttcatcatcaactgat
tctagcaaacatggtttgccagcaccagaaacttttagagaagttagtgctgacgcagca
gtaacttacaaacctgttctggaagatttgtccaataatacagcatttcctaatgtggaa
ctggagaacagtttccttgaaaatataactacatctgatgggcatgtacaggaaacaaaa
gaaatgccaaaagatgctacagaaaaaacaactgtttttgaagaatttctttcaaaaggt
gtggtaccatcaagcttttttcattctgacactgaagacctgttagaagaagaaactcct
gagaagctaaaggagctaaatcagttagatggaaatagtgctgatggaagtttgttatgg
atacatagcataccttcttcaattccacatgaaagtaaaacaggtggagtttttggtgct
gatggggaagccagtgtttggccaatctcaccgccaccacctgcagatacaattgtgaaa
cttcaaacagcccaaccagagtcaacaacgatttcttctaatcttgtaaatgaatattca
ggtcctgaaagcatttctgattataacaaacaaacaataaatacagaggatgtaaatgca
aatgaacttgtaactccaccatttttacttctggatgttaccaatggatcagatttcctg
attggtcaaggtgaaggctcagttgaaggctcagcaattcagatcccaggccaagatcta
tgtaaaagtaatccatgcttgcatgggggcacttgttacccacgtgactctttctatatc
tgcacttgtatgccaggtttcagtggtgatcggtgtgaagtagatatagatgaatgtcaa
tccagtccttgcagaaatggtgccacatgcattgatggtgtcagtacatttacttgtctt
tgtcttccaagctatgttggagcactttgtgaaaaagacactgagacctgtgattatgga
tggcataaatttcaagggcaatgctacaaatactttgcccatcgcaggacgtgggatgca
gctgagagagagtgccgcttgcagggtgcccatctaacaagcatcttgtctcatgaagaa
cagctgtttgtaaaccgcataggacatgactatcagtggattggcctaaatgataagatg
tatgagaatgacttccgctggacagatggcagcgtgctgcaatatgaaaactggagacca
aaacagccagatagtttcttttcttctggagaagattgtgttgttataatttggcatgaa
aatggtcaatggaatgatgttccatgcaattatcacctcacttacacatgcaagaaagga
acggttgcttgtggtcagccaccggtggtagaaaatgcaaatacctttggaaagatgaag
ccccgttatgaaattaactcattgatcagatatcattgtaaagatggcttcatccagcgg
catgttccaataatcagatgccaaggaaatggccgatgggatttacctaaaattacctgc
atgaatccatcttcattccaaaggacttattctaaaaaatattattataaaaattcttca
ccaggaaaggtaaactcatttaattcatcaaaacattttcatcgttggatcaggacatgg
caagattcaaggcgttga
DBGET
integrated database retrieval system
