Pantherophis guttatus (corn snake): 117679392
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Entry
117679392 CDS
T07329
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
pgut
Pantherophis guttatus (corn snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
Laminin_G_3
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
117679392
NCBI-ProteinID:
XP_060540323
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MISHFQCDTSAATDIILLVDGSWSIGRNNFGLIREFLAALLAPFNIAEDKIRVGLSQYSS
DPRTEWDLNTYSTWEQVSEAIRNLRYKGGNTFTGLALTHVLEHNLKEDVGMRPEASKLLI
LLTDGKSQDDASPPAQTLKNMGIKIFAVGVKNADETELRQVASEPLEMTVYNVVDFPLLR
SLVSQLTWLLCAWIKDQKNIGDPLKTMPVKSGVHLSPTNLLLKEVTSRSMHLIWNSPLIT
PQRYRVVYYPSRGGIPKEVVLDGATSSVELLNLTPQTEYLVSVFPVYENAVGDGLRGISS
TLPLSAPSSLRTSEISHNSIKLTWEPVEGATQYLILSSGTPNGAEDDTKELKVEQPEVWI
RGLTPSTEYSLAVYAMYGEDASNPASIQETTLALSPPRYLHFSNISHMSVRVSWEAASQA
AKSHRVMYSSSRGSNVGEVEVPGNASFAVLKPLSSLTQYFVRVVSVYEEGNSFPVMGNFT
TLKVPPPNQLKVTELSGSEVQLEWEASAASDVVLYQIKWNVLGEDAEEEISVAGNLASSI
LPGLKENTEYKISIWAYYKDGAQSDTVSIWHRISAKNPPTNLYVDSETPSSLRVHWTPPD
AAVQHYRISYSPERSHSKQQETITVSGRIQSIVLHSLLPARVYTVIVIAVYAAGESDPVS
VIGRTATVLARLPTMKESQFFKTEGCPSLRSTDGPIQGFDMMEAFGLMDKEYASIKGVAM
EPYIFLGTHTYTLYRDTQLTRKTSEVLPFGLPTEYTITFLLRLLPESPREAFSIWQITDE
DFQPLLSIILDPLKKSLVYFHRDHEADIEEITFDQQEVKKIFYGSFHKVHVSVSHGWVRL
YVDCKRIGEKILGKSVILSTAGFITLGKLTRTRGPRSGSAMLQLQSLQIVCSTSWPEEDR
CCEIPASRDEEVCPSLLPSCTCTSGVPGHPGPPGPPGNPGRRGIQGEQGEPGPKGEPGPP
GQAGPKGPGGHQGTPGSQGLTVQGPIGPPGLKGDKGDSGSPGIQGLMGPQGAAGKDGPQG
SKGVRGLEGAAGPPGPPGPRGFQGLAGARGNPGDRGPPGEVGPTGLPGPKGERGEKGEAQ
SLSTIYHLVNQACERLIQSHVLKFDTFVHEQSRKPVPIWEEEPKAGEPGPTGLTGFPGVK
GERGEIGMPGLPGRDGYPGERGVPGPKGEKGSFGQRVEGSEGPSGQAGPPGEMVVGQPGS
KGPPGSIGPSGFPGAHGQPGDPGPAGRCLPTGCHRDSTRDAGLIP
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccatttccagtgcgatacctctgctgcgactgatattatcctgctggtggac
ggatcttggagtatcggacgcaacaattttggactcattcgagaattcctggcagctttg
ctggcacctttcaatattgctgaggataagatcagagtaggcttgtcccagtacagcagc
gacccacggacggaatgggatctgaatacatattctacctgggagcaggtgtccgaagcc
attcggaatttgcgctacaagggagggaacaccttcacaggattggcacttactcacgtc
ctagagcataatctgaaggaagacgtgggcatgaggcctgaagcttctaaactcctcatc
cttttgaccgatggcaaatctcaggatgatgccagcccacctgcccagaccttgaagaat
atgggaatcaagatattcgctgtgggggtgaaaaatgccgatgaaacagagctgcgccaa
gtggcctccgaacccctcgagatgaccgtctacaatgtggtggattttcctctgcttcgt
tctctggtcagccaactcacgtggctcttatgcgcttggatcaaggaccagaagaatata
ggggatccattgaaaaccatgccagtgaaatccggggtccacttaagtccaaccaatctc
ctattaaaagaagttacttccagaagtatgcacctcatctggaactcaccactcataaca
ccccagagatacagagtggtctattatccttcccgaggtggaattcccaaagaggttgtt
ctggatggagccacatcgagtgtggagcttcttaatttgacaccccagacggaatatctg
gtttcagtcttccctgtttatgagaatgctgtgggagatggtctcagaggcatcagttcg
acactacctctgtctgcgcccagctctctcagaacatctgagatcagccacaacagcatc
aagctcacgtgggaaccagttgaaggggccacgcaatatcttatcctgtcttccggaaca
cccaacggcgccgaagatgatacaaaagagctgaaagtagaacagccggaagtttggatc
aggggcttgactcccagcactgaatactcgctagcagtttatgcaatgtatggagaagat
gctagcaacccagcaagtattcaagaaactactttggccctcagcccaccaagatatttg
catttctccaacatcagccatatgtcggtccgtgtcagctgggaggcagcttcacaagcc
gcgaaaagtcaccgagtgatgtattcctccagcagaggaagcaacgtaggtgaggtggag
gtccctggaaatgcctcatttgccgtgctgaagcccctctcctcactgacacaatatttt
gtccgcgtggtctccgtttatgaggaaggcaactcatttccagtaatggggaattttacg
acattaaaggttcccccaccgaaccagctaaaggtcaccgaactctccggaagtgaggtc
caactggaatgggaagcatccgcggcttctgatgtggttctgtaccagatcaaatggaac
gtgcttggagaggacgcagaagaggagatatccgttgctggaaacttggcatcttccatt
ttgcctggtttgaaagaaaatactgaatataaaatatccatctgggcctactacaaagac
ggagctcagagtgataccgtttccatttggcacagaatctctgccaagaacccacccaca
aatctctatgtggattcggagacccccagcagccttcgggttcactggactcctcctgat
gcggcagttcagcactacagaatcagctacagtccagaacggagtcacagcaagcagcag
gaaacgatcacagtctctggcaggatccagtccattgttctccattctctcctgcctgct
agagtttatacagtaatcgtaattgcagtctacgctgcaggagagagtgaccctgtatct
gtcattggccggacagctactgtcttggctcgattgcccaccatgaaagaatcccaattc
ttcaaaacagagggctgcccttcgcttcgctctacggatggccccatacaaggttttgac
atgatggaggcctttggattgatggacaaggagtatgcctccatcaagggggttgctatg
gaaccttacatcttcttaggcactcacacctacactctgtacagagatacccaattaacc
cggaaaacaagtgaggtgttaccttttggtcttccaacggaatacaccattacttttcta
ctccgccttctaccagaaagtccccgagaagccttttctatctggcagataacagatgag
gacttccagccacttctcagcatcattcttgatcctcttaagaaatcattggtatatttc
catcgtgaccatgaagccgatatagaagagatcaccttcgatcaacaggaagtgaagaaa
atattctatggaagctttcataaggtccatgtatcggtgagccatggctgggtcaggctc
tatgttgactgcaagagaataggagaaaagattcttgggaaatcagtgatcctttcgacg
gcaggctttatcacgctagggaagctgacaagaacacgaggaccacggagtggatcagcc
atgcttcagttgcagtcactgcaaattgtgtgcagcacttcgtggccggaagaggaccga
tgttgtgagataccagcttcgagggatgaagaagtttgtcccagtttgcttccttcctgc
acctgcacatctggtgtcccaggacatccggggcccccaggccctccgggcaaccctggg
cgaaggggcatccagggagaacagggggagcctggccccaagggggaaccaggtcctccg
ggccaagctggaccaaaagggccaggaggacaccaagggaccccaggttcgcaaggatta
accgtgcaaggccccattggcccacccggtcttaagggtgataaaggggacagcggaagc
ccaggaatacagggtctgatgggtccccagggagcagcaggtaaagatggccctcaagga
tcaaagggtgttcgaggactcgaaggtgcagctggaccaccagggccgccaggaccacgg
ggattccaaggtttagcaggggcccggggtaatcctggagacagaggccccccaggagaa
gtcggacccacggggctgcctggtccaaaaggagaaaggggggagaaaggtgaagcacag
tccctatctaccatttaccatctggtaaaccaagcttgtgagcgtctgatccagtctcat
gtgttaaaattcgacactttcgttcacgaacaatcacggaaacctgtccccatctgggag
gaggaaccgaaggctggagagcctggaccaactggtctcaccggtttccctggagtgaaa
ggtgaaagaggagaaattgggatgcccggacttccaggaagagatggatatccaggagaa
agaggtgttccagggcccaagggagaaaaaggctcttttggacaaagggtggaaggttct
gaaggaccaagtggtcaagcaggccctccaggagaaatggtggttggccaaccaggctcc
aaaggacctccaggtagtattggtccatctggatttcctggggctcatggccagcctgga
gatcctggtcctgcaggtagatgtcttcctaccggatgccacagagatagcacaagagat
gcagggctgattccatga
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