Pantherophis guttatus (corn snake): 117679431
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Entry
117679431 CDS
T07329
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117679431 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgut04121
]
117679431 (SLX4)
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117679431 (SLX4)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
117679431 (SLX4)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117679431 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
YbgS
Motif
Other DBs
NCBI-GeneID:
117679431
NCBI-ProteinID:
XP_034297228
UniProt:
A0A6P9DP22
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MVDSEDEFRQRDPPGRRRGAAARGAGTVAAPAAGPSPVPPECGLKRGGAPRPAGRKRRRE
AGGEPLAVPARSRLEAGPGGKRPRAEARGRGRPPPPLLLQGPEEARRGLEARAALLLSEA
PAAPRTPPLPASRWKGAPANASPGGWLWELSSLTGAPAVAPWGADQRPEFGTAGAPAEPP
ETERFPSRTGECFKAGSPRDADTLQDLLELAGEGLTFTQWSLDVGRLEHPEQEQMPGVQQ
KAFTRLLEKQQQQQQQLSQKCSCETFPLGSLAAAFKEMVNNPHLSDIQIQVDSGEVFYAH
MFVLYARCPQLLQFVDHRRFVVAEEGEVGASRVLLYDAPGDAVALFLKYLYTAEYFIPQH
LLSDVIDLAIRFGVKELAALCEGQPSEEISVEKPADDKDKVGDFEELLKSMWQDEDEETV
AKAVCRDEISDSMNEQELEEIYEFVATQRRMTSDEARKEKVCTEYRCDEVEKKIGQDGGS
CPRKVLEKPRRGVTIKKSEIKCDHESSKLRTSIASMGKDLKKYSVEFQQNLKEIVSFRAS
SRKEPTSEIHLGLAGDSTHSNHLETSATQFSVSEMKCCSVWKQNINIAKDKTTARNFSRL
FQAPAKDLQMSLPRDLEVPFSPITSGSQPNILDRLPSQNEKQQNTNRKGEAPIGSLEKSG
AVNPQDLNITSNHIVVLDSDEELEREAEKKLAEAASSFSEQQSWHKESPVADVLNCWSPA
PPQQDVSKVGDGLGTLICNEAQSLGECHQPLDPSGHKEGSFWEGLGWSEGRTLVVPETPL
AAWNSLNDVQVEKSRLNSSLEKQWTHEAQTEPLSCSYELLPVLSSTSLLEIEKPDNGLCA
AERDVVVVDDSEEEQEAVPLCSRGIFVEPLEAITANARNPLRTSVHMFDMQNNHPVTVAS
SVTNSAATFHFGVGDLLLHNSQNWPGEDFDSNVALPASSSLSASIPVPKISDLALQARDI
SCVTPLMPFPPYSSMDTPELKKELSRFGVRALPKRQMVLKLKEIFQFTHQQAGTDSKKKS
MPVFTSSFQKLQQKCLSPYRLLQGSPNTTNHTDLSEGGAQKPEAGLGWPKGAALPTNRAT
DGEGNGDLILTTSEVPAGTRRAGSETYAASQSSSVEFKVSMLAEKEGNVPASSIAASGEG
QKLEILKHYIHSNPSLCQQILLYQPIELSVLHAELKQNGVRIALDKLLDFLDANCITFTN
AEARREKKHLHRCKKKGQR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactcggaggacgagtttcggcagcgggacccgccggggcggcggcggggggcg
gcggcgcgcggggcaggcacagtcgctgctcccgccgccgggccgtctcccgtccccccg
gagtgcgggctcaagagaggcggcgcccctcggccggccgggaggaagaggcggcgggag
gcgggcggggaaccgctggcggttccggccaggtcccgcttggaggccgggcccggcggg
aagcggcccagggctgaggcgaggggccgcgggaggccgccgccgccgctgctgctccaa
gggccggaggaggcccgccgcggactcgaggcccgggcggccctgctgctctcggaggcc
ccggccgcgccccgcacgcccccgctgcccgccagccgctggaaaggagccccggctaat
gcgagcccgggaggctggctgtgggagctgagctcgttgacgggcgccccggccgtcgcc
ccttggggggccgatcagaggccggaattcggcacggccggggcgccagcggagcctcca
gagacggagcgtttcccaagcagaaccggcgagtgctttaaagccggcagtccgagagat
gccgataccctgcaagatctcctggagctggccggggaaggactcacgttcacccagtgg
agccttgatgttgggcggctggagcacccggaacaagaacagatgccaggtgttcagcaa
aaggcttttactcggttgttggagaagcagcagcagcagcagcagcaactatctcaaaaa
tgctcttgtgaaacattccctcttggctcactggctgctgccttcaaggagatggtcaat
aaccctcatttgagtgatatccagatccaggtggatagtggggaagtcttttatgcccat
atgtttgtattgtatgcacggtgtcctcaacttttacaatttgttgatcacagacgtttt
gtggtggctgaagaaggagaagttggagcctcccgcgtgctgttatatgacgctccaggg
gatgctgtcgctctattcttgaagtacctctacacagctgaatatttcataccccaacat
ttgctgtcagatgtgattgacctagcaataaggtttggagtgaaagaattggctgctctg
tgtgaaggccaacctagtgaagagatatctgtggaaaagccagctgatgataaagacaaa
gttggagattttgaagaacttttgaaatccatgtggcaggatgaagatgaggaaactgtg
gcaaaagctgtatgcagagatgaaatcagtgacagtatgaatgagcaggaattagaggag
atttatgagtttgtggctactcagcgcagaatgacctctgatgaagccaggaaggaaaag
gtctgcactgaatatagatgtgatgaagtggaaaagaagattggccaagatggtggttct
tgcccaagaaaggtgctggagaagcccagaagaggtgtgacaattaagaaaagtgaaata
aaatgtgatcacgagtcatccaaattgagaacctctattgccagcatgggaaaagatctg
aaaaagtattctgttgagttccagcaaaatttgaaagaaatagtgtccttcagagcaagt
agtagaaaagaacccacaagtgagattcatctcgggttagctggggattctactcatagt
aatcatctcgagacgtctgcaacccaattttctgtctcagaaatgaaatgttgttctgtc
tggaagcagaatattaacatagccaaagataaaactacagcaagaaatttttcaaggctt
tttcaagcgccagcaaaagatctccagatgagtttgccaagagacctagaagttcctttc
tctccaataacatctggatcacagccaaacatattagataggcttccctctcaaaatgaa
aagcaacagaatacaaacaggaagggagaggctcctatcggcagcctagagaagtctggt
gcggtaaatcctcaggatctgaatattacgagtaaccatattgtagtactggattctgat
gaagagctggaacgggaggcagaaaagaaactggcagaggctgcttcaagcttctctgag
caacagtcatggcataaagagagccctgttgctgatgtcctaaactgctggagcccagcc
cctccccagcaggatgtaagtaaagtgggagatggattgggcacattaatttgtaatgag
gcacaatctttgggtgaatgccatcagcccttggacccgagtggtcacaaagaaggcagc
ttctgggaaggtttaggctggagtgaaggaaggacattggtggtgcctgaaactcctctg
gcagcctggaatagcttgaatgatgtgcaggtcgaaaaatccaggttgaattcttccctt
gaaaagcaatggactcatgaagcccagacagaaccgttgtcttgcagctatgaactgctg
ccggtgctttcatctacctctttgcttgaaatagagaaacctgacaatggcctatgtgca
gcagagagagatgtggtggttgtggatgacagtgaggaggagcaggaagcagtgccgcta
tgttcaaggggcatctttgtagaacctttggaggcaataactgcaaatgccagaaatcct
ttgaggacttctgtccacatgtttgacatgcagaacaatcaccctgtgactgttgctagt
agtgtaactaattcagcagccacgttccattttggagtgggagatttgctactgcacaac
tctcagaattggcctggagaagactttgacagcaatgtagctcttcctgccagctcaagt
ttgtctgcttccatacctgttccaaagatttctgatcttgccttgcaagccagggacatc
tcttgcgttactccgctcatgccctttccaccttattcaagcatggacaccccagaactg
aagaaggaattgagcagatttggtgtccgtgctctcccaaaacggcagatggttttaaaa
ctgaaggaaatttttcagtttactcaccaacaggcaggaacagactctaagaaaaaatct
atgccagtttttaccagttcctttcagaaactgcagcaaaaatgtctgtccccttatcga
ctgcttcaggggagcccaaatacgactaaccatacagatctctctgaaggaggtgctcaa
aagccagaggctggacttgggtggccaaagggagctgctcttcctacaaacagagcaact
gatggagagggcaatggagacctaatcctgacaacttctgaagtgccagctggcacaaga
agagctggaagtgagacttatgcagcatctcaaagttcatccgtggagtttaaagtcagc
atgctggcagagaaagaaggaaatgtaccagcctcttcgattgctgctagcggtgagggt
cagaagctggaaatcttgaagcactatattcattccaatccatctctttgccagcaaatt
ctgctatatcagcccattgaactgtctgtactgcatgcagaactgaagcaaaatggcgta
aggattgcgttggacaagttgttggactttttggatgccaactgcatcacgtttaccaat
gcagaagctcggagagaaaaaaaacacctccatagatgcaagaaaaaggggcaaaggtga
DBGET
integrated database retrieval system
