Pantherophis guttatus (corn snake): 117679725
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Entry
117679725 CDS
T07329
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X2
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgut03021
]
117679725 (TAF1C)
Transcription machinery [BR:
pgut03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117679725 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
117679725
NCBI-ProteinID:
XP_034297780
UniProt:
A0A6P9E394
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MRGRAVPRVRAPMAAFPAALLPGLFRAGPPRRDGPGAGLRVGGWGQCGQVGVAAGGPGAA
PLFLPRRRREALERWLPAELAPLPLKPPEPAPPIDGASAGSALSALGPQLGRLFLDQPEA
AFGATARLLHEHVYLGDSTDWRRAGGVCGMTRLLRALEGRTPGGSAGRPLSGVASLSRDW
LSELPLKLVAQWLHEDLAERRRRLSFDETPTGGALAWLPDGARREPPRRGCLVFPAGEAA
DRLCFQEAALRPAAGGTLRPKLRGCPVQFELNGAVQQVAAAHLEGSDFLGVRSGHFCGAW
RRQHGKPPIPLQVVCTEAPCSSIAVSPHLPGELSLCTLEGELYLWNVETGLQRLHQDRDS
LFFRDPSPWRWSEFSAHPRVLTFADHTGLKGLDQRVSSGGHFELFKVGAEADCQRGERLV
LSKYLGHSEPFHHLVATQFSVFVLDERFPLVPVLCWEHMMQRPPIYAHLTPAGPPQHSHK
VLLGAYHSQEMLLLQYSGGHSLPCQLQGAPQKLPSMKECLPHFPVQVPVRQSALSQRLSV
PTAGIAAALGQQDGIRTLLVFQLSQAGDLFYQPLLPQASGEEAEGQAHTDSDAEASSRGA
VVGRPCQDPISPDGAKTACAPAATALYRRWLKAWKRAAPPTQDWQCPPATLSQGCLFSHR
ERRETEGSAPSSLEASRCLRKAMQEERLFCSWGDEDGVPLPPAPQEPSGELDQRLAASWT
GDWVTWWLERLGGTKARRQQALREQRRRAKRCRGTRSLSGSFTSSTSYQSELSDWSGDGR
ARRPPPALPAEPPVQAPPTLPPSFQGDSQELLSSQSLSARGIPRERRQTLRRYLAVLDQP
PEPPEDHLPASQASGLGSSQRGPSSSQGPQLKRARMGF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgggcagtccctcgcgtgcgcgcgcccatggcggccttccccgccgcgctg
ctgccggggctgttccgcgcggggccgcccaggcgcgacggtcccggggccgggctgcgg
gtgggcggctggggccagtgcgggcaggtgggcgtggcggcgggcggcccgggagcggcg
ccgctcttcttgccccgccgccgccgggaggcgctggagaggtggctgcccgccgagcta
gccccgctgccgctgaagcccccggagccggcgccgccgatcgacggcgcgtccgccggc
tcggccctgagcgcgctgggcccgcagctggggcggctcttcctggaccagccggaggcg
gccttcggggccacggcgcggctgctgcacgagcacgtctacctgggggactcgacggac
tggaggagagccggaggcgtctgcgggatgacccggcttcttcgcgccctggaaggccgc
acgccaggcggcagcgccgggcggcctctctccggcgtggcctcgctgtcccgcgactgg
ctgtccgagctgcccctgaagctggtggcccaatggctccacgaggacctggccgagcgg
cggcgacgcctgtccttcgacgagacccccaccggcggggccttggcctggctgcctgac
ggcgcccgcagggaacccccacgccggggctgcttggtgttcccggccggggaggccgcg
gaccggctctgcttccaggaggcagccttgagacccgcggccggtggcaccctgagaccc
aaactccggggctgtcccgtccagttcgagctcaacggggcagtccaacaagtggcagca
gcgcacctggaaggcagcgacttcctgggggtccgctcaggacatttctgtggggcctgg
aggcggcagcatggaaagccccccatacctctgcaggtggtttgcacagaagccccctgc
tcttccattgcagtcagcccccacttacccggtgagctgtccttgtgcaccctggaaggg
gagctgtacctctggaatgtggagacggggctccaacggctgcaccaggaccgtgacagc
cttttcttccgggacccttcaccttggcgctggagcgagttttctgcccacccacgagtg
ctgacttttgccgaccacactggcctgaagggtctcgaccagagggtgtcctccgggggc
cacttcgagctcttcaaggtgggggctgaagcagattgccagcgtggggaacgcctggtc
ctctccaaatacctaggccattcagagcccttccaccacttagtggccacgcagttttcg
gtctttgtgctggacgaacgcttccccctggtgcctgtcctgtgctgggagcacatgatg
cagcggccacccatctacgcccacctcacacctgctgggcctccgcagcacagccacaag
gtgctcctgggcgcctaccactcccaggagatgctcttgctgcagtactcaggtggccac
agcctcccttgccagctccaaggggcgccccagaagctgccatccatgaaggaatgcctg
ccccactttcctgtgcaggtgcctgtgaggcagagtgccctcagccagcgtctctccgtc
cccacagcaggcattgcagcagccctgggccagcaggacggcatccggacactgctggtc
ttccagctttcccaggccggggacctcttctaccagccactgctcccacaggccagtgga
gaggaggccgaggggcaggctcacaccgactcagatgcagaggccagctccaggggtgct
gtggtgggcagaccctgccaggaccccatttctccagatggagcaaagacagcttgtgcc
ccggcagctacagccctctaccggcgttggctgaaggcctggaagcgggctgccccgccc
acccaggattggcagtgccctccggccacgctcagtcagggctgtctcttcagccaccga
gagagaagggaaacggaggggagcgccccgtcctctctggaggcttcccgctgcctgcgc
aaggccatgcaggaagagcgactcttctgctcatggggggatgaggacggggtccccctg
cctcctgccccccaggagccctcgggggagctcgaccagcgactggcggcttcctggacg
ggcgactgggtgacctggtggctggagaggctgggcggcaccaaggcccggcgacagcag
gcgctgagggagcagcggaggcgagccaagcggtgcagggggacgaggagcctctcgggc
agcttcacctcctccaccagctaccagtcagaactcagtgactggtcgggggatggcagg
gcccgcaggccccctccggccttgcctgcggagccccccgtccaggctccacccactctg
ccacccagtttccagggggactcccaggagctgctgtcctcacagagcctgagtgcccgg
ggtatcccccgcgagcgccgccagaccctgcgcaggtacctggctgtgctggatcagccc
ccagagccccctgaggaccacctgcccgccagccaggcttcgggcctgggcagcagccag
cggggtccctcctcttcccagggcccccagctgaaacgtgcccgcatgggcttctga
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