Pantherophis guttatus (corn snake): 117679890
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Entry
117679890 CDS
T07329
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04010
MAPK signaling pathway
pgut04210
Apoptosis
pgut04218
Cellular senescence
pgut04620
Toll-like receptor signaling pathway
pgut04621
NOD-like receptor signaling pathway
pgut04622
RIG-I-like receptor signaling pathway
pgut04623
Cytosolic DNA-sensing pathway
pgut04625
C-type lectin receptor signaling pathway
pgut04920
Adipocytokine signaling pathway
pgut05132
Salmonella infection
pgut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117679890 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117679890 (NFKB1)
04218 Cellular senescence
117679890 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117679890 (NFKB1)
04621 NOD-like receptor signaling pathway
117679890 (NFKB1)
04622 RIG-I-like receptor signaling pathway
117679890 (NFKB1)
04623 Cytosolic DNA-sensing pathway
117679890 (NFKB1)
04625 C-type lectin receptor signaling pathway
117679890 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117679890 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117679890 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
117679890 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgut03000
]
117679890 (NFKB1)
Transcription factors [BR:
pgut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117679890 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
117679890
NCBI-ProteinID:
XP_034298076
UniProt:
A0A6P9E035
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MADENSYLLGMGDHQVYAMEHYPLGMNQLYNNTSMISTDLPLHTTDGPYLQIVEQPKQRG
FRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYAGPAKVIVQLVTNGKHVHLHAHSLV
GKHCEHGVCTVNAGPKDMVVGFPNLGILHVTKKKVLDTLENRMIDACKKGYNPGLLVHPD
LNYIQVEGGGERQLTERERDIIHQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPV
LSDPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQIRFYEEDESGSVW
EGFGDFSPTDVHRQFAIVFKTPKYRDVNITKAASVFVQLRRKSDLETSEPKPFLYYPEIK
DKEEVLRKRQKLMPNFSDSFGGSGAGAAGGGMYGGVGGGGGGSSAGSGYGYPPYGFSSYG
TMHFHSSTNKSGAGMKHAVSNGMPKRENQMCCNTKHDEKFKEKVEIEDKSKASTGSVSEI
EDASANIHLQDAYFLEKAMELAKRHANALFDYAVTGDVKMLLAVQRPLTTVQDENGDNVL
HLAIIHLHMELVKNLLEVIANMNAAAVLNVRNDLYQTPLHLAVITRQAGIVKALLVAGAD
VTLLDRHGNSVFHLAAQQGDEVVLSMLLQHKEASVMRDLPNGDGLTVLHLAVIANSMQCV
RQLLATGVDVNIQEQKSGRTALHLAIEEGNISMAGCLLLEGDAFVDSVTYDGTTPLHIAA
GRGSTKLAALLKAAGADPHIENFEPLFEEEDTKDNESEKIIPGTTPLDMAASWEVYDILS
SKLCKSKAASEDLPIQGNMKDLNEDVKLQLYKLLEVPDLTKSWSMLAQKLGLGILNNAFR
LSPSPSKTLLDNYEVSGGTVNELIDALRKMDYPEAVEIIEKRTTLSSQSSQEKSKNDVLP
LCDLPSPRTEQADEICNFKFQDAESICDSGVEISLHKLSFTSESFTNKTSINLKKKASGY
GQDNSLQGKIEVT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagaattcttacctcttgggaatgggtgatcatcaggtatatgcaatggaa
cattaccccttggggatgaatcagctgtacaataacacaagcatgatttcaactgatctg
ccgcttcacacaactgatgggccatatcttcaaatagttgaacaacctaaacagaggggc
tttcgtttccgctatgtttgtgaaggaccatcccatggtggacttcctggagcttctagt
gaaaagaacaagaagtcttatccacaagttaaaatctgcaattatgctggacctgcaaaa
gtaatagtgcagttagtcacaaatggaaaacatgtccacttgcatgctcacagcttggta
ggaaaacactgtgagcacggagtttgcacagtaaatgcaggaccaaaggacatggtagtg
ggatttccaaacttgggaatattacatgttacaaagaaaaaagtattagacacactggaa
aaccgcatgattgatgcatgtaaaaaagggtacaatccaggactcctcgttcaccccgat
ctcaattatatacaagtggaaggcggaggggagaggcagctaacagaacgagaacgcgat
atcattcatcaggcagcacttcagcagactaaggagatggatctcagtgttgtacggctc
atgttcactgcattccttcctgatagcactggtagcttcacaaggagacttcagcctgtc
ttgtctgaccctatatatgacagcaaagctccaaatgcatccaatttaaaaattgtacgg
atggatcggactgcaggctgtgtaacagggggagaagaagtttacctactttgtgacaag
gtccaaaaggatgatattcaaatccgtttttatgaagaagatgaaagtggtagtgtctgg
gagggttttggagacttttcgcctactgatgtgcacagacagtttgcaatagtattcaaa
acaccgaagtatcgagatgtcaacatcacgaaagcagcatctgtttttgttcagttacgg
cgaaaatcagatctagagacaagcgaacccaaacctttcctgtactatcctgaaatcaaa
gataaagaagaagtgctaaggaaacgacagaaactcatgccaaacttctccgatagtttt
ggtggaagtggcgcaggtgctgcaggaggtggaatgtatggaggcgtaggaggaggaggt
ggtggcagcagtgctgggtcaggatatgggtacccaccatatgggttttccagttatggc
acaatgcatttccattccagcacaaacaaaagtggtgcaggaatgaaacacgcagtctca
aacggcatgcccaaaagagagaatcaaatgtgctgtaacacaaaacacgacgagaaattc
aaggaaaaagtagagattgaagataaaagcaaagccagcactggctcggtttctgagata
gaagatgctagtgccaacattcatttacaagatgcctactttttggaaaaagccatggaa
cttgctaagcgacacgcgaatgctctttttgactatgcagtcacaggagatgtaaagatg
cttctggcagtacagcgcccccttacaactgttcaggatgaaaatggggataacgtcctg
cacttagcaattattcaccttcacatggaactggtgaagaaccttttagaagtaatagca
aacatgaacgctgctgctgttctcaatgtgagaaatgacctttaccagactcctttacac
ttggctgtgataacaaggcaggcaggaattgtgaaagccttgcttgtggctggggctgat
gtgaccctcttggatcgccatgggaattctgtcttccatttggcagctcagcaaggagac
gaggtggttttaagtatgttgcttcagcacaaagaggcatctgtgatgagagaccttcct
aatggagatggactgacagtccttcacttagctgttatagcaaacagcatgcagtgtgtc
agacaacttcttgctactggtgttgatgtcaatatccaggaacagaaatctggaaggaca
gccttgcacctggctattgaagaaggaaatatttccatggcaggttgccttctacttgag
ggagatgcatttgtggacagcgttacttatgatggaaccactccacttcacatagcagct
ggaaggggatctacaaaattggcagctcttctcaaagcagcaggtgcagatccccacatt
gaaaattttgagccgttgtttgaagaggaagatacgaaagataatgaaagtgaaaaaatc
atacctgggacaacgcctctggatatggcagccagctgggaggtgtatgacatcttgagt
agcaaactctgtaagtcaaaggcagcttctgaggatctaccgattcaaggcaatatgaaa
gacctgaatgaggatgttaaattacagctgtacaaattacttgaagttcctgatctgacc
aaaagctggtccatgttggcacagaagctaggcctaggaatattaaacaatgcctttcgg
ttgagtccttctccatcaaaaactctactggataattatgaggtttctggtggaacagta
aatgagttgattgatgccctcagaaaaatggattatccagaggctgttgaaataattgaa
aaaagaactactttgtcaagccagtctagccaggagaaatccaaaaatgatgttcttcca
ttatgtgatttaccttctcctaggacagaacaagcagatgaaatatgtaatttcaaattc
caggatgctgaaagcatttgtgacagtggagtagagatttctcttcacaaacttagcttt
acatctgaatcttttaccaacaagacatcaataaatcttaagaaaaaggcttcaggctat
ggacaggacaattcattacaaggcaaaattgaagtaacttaa
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integrated database retrieval system
