Pantherophis guttatus (corn snake): 117680147
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Entry
117680147 CDS
T07329
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgut04131
]
117680147 (LRBA)
Membrane trafficking [BR:
pgut04131
]
Endosome - Lysosome transport
Others
Others
117680147 (LRBA)
Endosome - Golgi transport
117680147 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117680147 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_1st
TPR_TTI1_C
SUKH_6
Motif
Other DBs
NCBI-GeneID:
117680147
NCBI-ProteinID:
XP_034298601
UniProt:
A0A6P9E1N6
LinkDB
All DBs
Position
Unknown
AA seq
2861 aa
AA seq
DB search
MASEERQSSSSPSTGDDKGGGRGEGGGGTTGQGKDGSSAEKQSLNPGIPIRGIRMKFAVL
TGLVEVGEVSNRDIVETVFNLLVGGHFDLEMNFIIQEGEGITCMLDLLDKCDVTCQAEIW
SMFTAILKKSIRNLQICTEVGLIEHVLQRIDRADNMIADLLVDLLGVLASYSVTVRELKL
YFSKLQGDRGKWPLYAGKLLSVLKYMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGF
TFHTWLRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLVVTSIKSKGKGFQHCVK
FDFKPQKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNVSDTFDKCFLGSSETA
DANRVFCGQMTAAYLFSEALNAAQIFAIYQLGLGYKGTFKFKGESDLFLADHHKQLLYDG
KLSNAIAFTYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVITHSIQSAMHSIG
GVQVLFPLFAQLDYRQYSLDQPDTTLCSILLAFIMELLKNSVAMQEQMLSCKGFLVIGYS
LEKSSKAHINRTVLDLCLAFAKYLSNLHNGAPLLKQLCDHILLNPVIWIYTPAKVQLMLY
TYLSTEFIGIANIYNAIRRVGTVLLAMHTLKYYYWVVNPQDRSGITPKGLDGPRPNQKDI
LSLRACLLMFIKQLVTKDYGVKEDELQGILNYLLTIHEDENLMDVLQLLVALMSEHPSSM
IPAFDQRNGLRVIYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMMGHGLFSLLIER
LTLQTNLISMTTYNVLFEILIEQICTQVMHKQHPDPDSAVKIQNPQVLKVIAVLLRNSPP
CSETMEVHRVFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPQSSDEQKITEMVY
AIFRILLYHAIKYEWGGWRVWVDTLAITHSKVTFEIHKQNLSRMFREYEEKGDECCSAGP
SSVIRTVSGISKETEVTEKLHLLEKKEADTSIVDIDNRRMNNSVLKDESRLPDFEEHSNL
EKNKEKNKSENIQKTLDLNEAPSLDLPLQAQVTKQSSEHTAEIIGINHEEKEISTGDSQS
PLENVETLESPEMLENVTPEGVEEDEDFVDLKEETNLALTSEQCVPKPIEENDLCDSQVT
SVVQQCTASSKEPVSIEVVPEIVEGSIVEESIVEGSIVEGSIVEGSVETEQQDCLPEISG
PEINRAQSTSDTENNIDDKNTNQPQTKTVVDSTQPQTSEAIIVSDKKIARLDVSSIASDT
ERLELKPHANPEVNHPPRAISETSRQYDSSDQNVATPADGQRKDSRSTMFRIPEFRWSQM
HQRLLTDLLFSIETDVQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLVSQVMDNMIMACGG
ILPLLSAATSATHELESIEPTQGLSVEASIAFLQRLISLVDVLIFASSLGFTEIESEKNM
SSGGILRQCLRLVCAVAVRNCLECQQQHMLMKPSGENVKHQKTIQSLIASGRTGAKSPVD
IVTGGISPIRDIDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDI
LEPQDERRQFQPSQSPKIVKEEQSEAITTLSQEPAEQSENVTSPQRRDSGIQEKAYSGSG
HNSEMVTEPERQSISTGPDAISEILCTLSSEVNKSQENKNEVHNEVDGKTASSVQTAKNV
NVKDILRSLVSAPADGATVDPTVLPPVFLGVLGDGAAAQPIQFQSFDRSVVVAPKKSVSS
SAATINVPTNAVSVVSSLDSSQAPDVTGGSPSNGSSDSRLPSVPTLSSVPEDSASNMSIS
ERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLL
CSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDVHRHAEF
ESLCAQYSAEKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILMDKHGAWGNSPPSRSR
EFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAIDHAPDEDVLVKGKQSIKNQALGNQ
NSESEILLEVDDDNLSSMEEKELENLTGPVSLCTPAQLVAPCVVVKGTLSITTSEVYFEV
DEEEPSFKKMDPKQILAYTDGLHGKWLFSEIRSVFSRRYLLQNTALEIFMANRVAVMFNF
PDPATVKKVINCLPRVGIGTSFGLPQTRRISMATPRQIFKASNMTQRWQHREISNFEYLM
FLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAER
YETWEDDQVPKFHYGTHYSTASFALTWLLRIEPFTTFFLNLQGGKFDHADRAFSSVSRAW
RNCQRDTSDIKELVPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRIN
RLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGSVNLNSIMDPLLREAV
EAQIRSFGQTPSQVLIEPHPPRSSAMQLYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTH
VAANTQPGLANSAVITVTVNRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMH
KRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLMQVVFGHWDVVT
CLGRSESYIGGNCYILSGSRDATLLLWYWNGKTSSIGDNTNGETAAPRAILTGHDYEITC
AAICAELGVVISGSKEGPCLIHSMNGDLLRTLEAPENCVKAKLIQASREGHCVIYYDNGH
FCVFSVNGKLHSTMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVYDLKQLFAYPGCDA
GIRSMTLSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8586 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagaaaggcagagctcttcctcgccgtcaacaggggatgataaaggagga
ggccgcggcgaaggtggtggtggtactactgggcaaggaaaagatggaagctcagctgaa
aagcagtctttgaatccaggcatccctatccggggtatcaggatgaaatttgctgttctg
acaggattggtggaagttggggaagtatccaacagggatattgtagaaactgtgttcaat
ctgcttgtaggtggtcattttgatctggaaatgaattttattatacaagaaggagaaggt
attacatgcatgttggacttgctggataagtgtgatgtcacttgccaggcagagatatgg
agcatgtttacagccatcctgaaaaaaagtatccgaaatctgcagatttgcacagaagta
ggtctcattgagcatgtgcttcagaggattgatagagctgacaatatgattgcagatctt
ttagtagatttgcttggagtattagcaagctacagtgtgacagttcgggaattaaagctg
tactttagcaaacttcaaggagacagaggaaaatggcctctgtatgctggaaagctgcta
tctgtgttaaaatatatgccccagaaatatgggcctgatgccttcttcaatttcccagga
aaaagtgctgcagctattgccttacctcctatagcaaagtggccataccagaatggattt
acctttcatacttggttaagaatggaccctgtaaataatatcaatgtagacaaagataag
ccttacttatattgttttagaacaagtaaagggcttggttactctgctcattttgtggga
ggctgtttggttgtgacatcaattaagtcaaaaggaaaaggtttccagcactgtgtgaaa
tttgatttcaagccgcaaaagtggtacatggttactattgttcatatctataatcgctgg
aagaacagtgaactcagatgttatgtgaatggagaactagcatcatatggagagataaca
tggtttgtcaatgtcagtgatacatttgacaaatgtttcctgggctcttcagaaacagca
gatgccaatcgagtgttttgtggccagatgacagctgcttatcttttcagtgaagctctc
aatgctgctcagatctttgcgatttatcaacttggtctgggatacaaaggaacttttaag
ttcaagggagaaagcgatctgttcctagctgatcatcataaacagttattatatgatggg
aaactgtctaatgctattgcctttacatacaacccaagggctacagatgcacagctctgc
ctagaatcatcacccaaggacaatccttctatctttgtacattcaccacatgccctcatg
ttacaggatgtgaaagcagtcataacccattctatccaaagtgcaatgcattctattgga
ggagtccaggtgttatttcctttatttgcacagttggactataggcaatattccttggat
cagcctgacacaactctttgttctattttactggctttcattatggagttgctgaagaac
tcagttgctatgcaagaacaaatgctttcttgtaagggcttccttgtaataggatacagt
cttgaaaagtcttccaaagcacacattaacagaactgtcttagacctttgccttgccttt
gctaaatatttgagcaatttgcataatggagcccctttgctgaaacagctctgtgatcat
attctccttaaccctgtaatatggatttatactccagccaaggttcaattgatgttgtac
acttacttgtccactgaattcattggcatagcaaatatatataatgcaattagacgagtt
ggcacagttctattggcaatgcataccttgaagtattactattgggtagttaatcctcaa
gaccgtagtggaattactcctaaaggtttagatggacctcgacctaatcagaaagatatt
ctttctctgcgagcctgtttactgatgtttattaagcagttggtgacaaaggactatgga
gtgaaagaagatgaactccagggcattctgaattatcttcttaccattcatgaggatgaa
aatttaatggatgttttgcaattgcttgttgctctcatgtctgagcaccccagttctatg
attcctgcttttgatcagaggaatggattacgtgttatctacaaacttcttgcttccaaa
agtgaaggaatcagagtacaagcactgaaagtgatgggctactttttaaagcatctggca
cccaagaggaaagcagaaattatgatgggacatggactgttttctcttctgattgagagg
cttacgcttcaaacaaacttaatttccatgactacctacaatgtactttttgagatactt
attgagcagatttgtacacaagtgatgcataaacagcatcctgacccagattcagcagtg
aaaatacaaaatccccaggttctgaaagttattgctgttttgctacgtaattccccaccg
tgctcagaaaccatggaagtccaccgagtcttcctatcagacatgattaagctttttaat
aacagcagggagaataggaggagtttactgcagtgttctgtgtggcaggaatggatgctt
tccctttgctattttaatccccaaagctctgatgaacagaagataacagaaatggtgtat
gccatttttcgaatactactttatcatgcaataaagtatgaatggggtggctggcgtgtt
tgggtggatactctagcaattacacattcaaaggtaacttttgaaatacataaacagaac
ctttctcggatgttcagggaatatgaagagaaaggagacgaatgctgcagtgctggtcca
tcatccgttattagaacagtttcaggtattagtaaagaaaccgaagttacagagaaactc
catcttcttgaaaaaaaagaagctgacacttctatagttgatattgacaacagacgcatg
aacaacagcgttttgaaagatgaaagtagattacctgattttgaagaacacagtaattta
gaaaaaaacaaagaaaaaaacaaatcagaaaatattcagaaaactcttgatttaaatgaa
gctcctagtttggatcttcccctacaagcccaagtgacaaaacagagctcagaacatact
gctgaaattattggaataaaccatgaagaaaaagaaataagtaccggtgattcacaatca
cctttagaaaatgttgaaacactagaaagtccagaaatgttagaaaatgtaacaccagaa
ggtgtggaggaagatgaagattttgttgatttaaaagaggagactaatctggcacttaca
tcagaacaatgtgttccaaaacccattgaggaaaatgatttgtgcgatagccaggtaacc
tccgttgtacagcagtgcactgcttcttcaaaagaacctgtttcaatagaagtagtacct
gaaattgttgaaggatcaattgttgaagaatcgattgttgaaggatcaattgttgaagga
tcaattgttgaaggatcagtggaaacagaacagcaggattgcttgccagaaatcagcggt
cctgaaataaacagagctcagtcaacttcagacactgagaataacattgatgacaaaaat
actaatcaaccccaaaccaagacagttgtagatagcacacaaccacagacttcagaagca
ataattgtttcagataagaaaattgccagacttgatgtttccagcattgcatcagatact
gaaagattagaattaaaaccccatgcaaatccagaagtaaatcatcctcctagagccatt
tctgagacatctaggcaatatgattcatcagatcaaaatgtagcaactcctgcagatggg
cagaggaaggattctagatctaccatgttccgtatccctgaattccgatggtctcaaatg
catcagcgcttgcttacagatcttctcttttctatagaaacagatgtacaaatgtggaga
agtcattctaccaagactgtgatggacttcgtgaacagcagtgataatgtcatctttgta
cataacacaattcatcttgtctctcaagtgatggacaatatgattatggcttgtggtggc
atattacctttgctttcagctgctacatccgctacgcatgaattagaaagcattgagcca
actcaaggattatcagtggaagcttccatagcattccttcaaaggttaattagcctcgtg
gatgtattgatctttgcaagttcccttggatttactgaaattgagtcagagaaaaatatg
tcatctggtggaattttacggcaatgtcttcgacttgtatgtgcggtagccgtcagaaat
tgtttggagtgtcagcaacagcatatgttaatgaagcctagtggagaaaatgttaagcat
cagaaaacaatacaaagccttatagcctcaggaaggactggagcaaagagtccagttgat
attgtaaccggaggaatttctccaataagagatattgacagacttctacaggatatggat
attaatcggctccgtgcagtggtattcagagatatagaggacagtaagcaggcacagttc
ttggctttggctgtagtgtattttatctctgtactcatggtatcaaaatacagagatatt
ttggaacctcaagatgaacggaggcaatttcaaccttctcagtcacccaaaatagttaag
gaagaacaatctgaagctattactactttaagtcaggaacctgccgagcagtcagaaaat
gtgacgtctccacaaagaagggattctggaattcaggagaaagcatattctggatcagga
cacaattctgagatggttactgaaccagaaagacagagtataagtacaggtccagatgca
atcagtgaaatactatgtactctttcttcagaagttaataaatctcaagaaaataaaaat
gaagtacataatgaggttgatggcaaaactgcatcctctgtacaaactgcaaaaaacgtc
aatgtgaaagacatcctaagaagtttggtcagtgctcctgcagatggggccacggtggac
cctactgttcttccacctgtttttcttggagtccttggtgatggtgccgctgcacaacca
atacaattccaatcttttgacaggagtgtggttgtggcaccaaagaagtcagtgagttca
tctgcagctacaattaacgtgcctacaaatgctgttagtgtggtttcttctttggattct
tcccaagctccagatgtaactggaggctctccaagcaatggatcatcagattcaagatta
ccatctgttcctacactttcttctgtgcctgaggattctgcttcaaacatgagtatttca
gagaggcttgagcatgctttggaaaaagctgcccctcttctgagggagatatttgtggac
tttgctccttttctttcgcgtaccctcttgggtagtcatggtcaagaactactgatagaa
ggtacaagtcttgtatgtatgaaatctagcagttcagttgtggaattggtcatgctgctt
tgttctcaggaatggcagaactcaatacagaagaatgcaggcctagctttcattgaactt
gtcaatgaaggaaggttgctgagtcaaacaatgaaagatcatttagtgagggtagcaaat
gaagcagaatttatcttgagtaggcagagagcggaagacgttcataggcatgctgaattt
gagtcattgtgtgcgcagtattctgcagaaaaacgtgaagatgagaagatgtgcgatcat
ttgataagggcagccaagtatcgtgatcatgtgacagcaacacagctgatacagaaaatc
atcaatatactgatggacaagcatggagcctggggcaattctccgccaagtcgttctcgt
gagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgt
aacccccttggatcgacacatcctgaagcgacattaaaagctgccatagaccacgctcca
gatgaagatgtacttgttaaaggaaaacagtctatcaagaatcaggctttaggaaatcag
aattcagaaagtgagattctcctggaagtcgatgatgataatttgtcatccatggaggag
aaagaacttgagaatttaactggtcctgttagtctatgtacaccagctcagctcgtggcc
ccttgtgtagtagtgaaaggcactctgtccatcaccacctctgaagtgtattttgaggta
gatgaagaagaacccagttttaagaaaatggatcccaagcagatacttgcatacacggat
ggactgcatgggaaatggttgttttcagagattcgatcagtattttctcgacgctatcta
ttgcaaaacacagcattggaaatctttatggctaatagagttgctgtcatgttcaacttt
ccggatcctgcaactgtaaaaaaagtaataaattgtttacctcgtgttggaattggaact
agtttcggattgcctcaaaccagacgtatttctatggccactccacgtcaaatctttaaa
gcttcaaatatgactcagcgatggcaacacagagagatttcaaactttgaatatcttatg
tttcttaataccattgcagggcgtacatacaatgatttaaaccagtatccagtatttcct
tgggtgatcactaactatgaatcagaagagttggaccttacacttccgagtaatttccga
gatttgtcaaagcctattggtgctcttaatcccaaacgagctgcattctttgcagaacgc
tacgaaacatgggaagatgatcaagttccaaagtttcattatggcactcattattcaact
gccagttttgcactcacttggttgttaagaattgagccttttacaacatttttcctaaac
ttgcaaggtggaaagtttgatcatgcagatagagctttctcatcagtttcaagggcatgg
cgcaattgtcaacgtgacacatctgatatcaaggagcttgttcctgaattttattatcta
cctgagatgtttgtcaatttcaataattacaatcttggagtgatggatgatggaacagtg
gtgtctgatgttgaacttccaccatgggctaaaaccccagaagaatttgttcgcataaat
agactggctttggaaagtgaatttgtttcctgtcaactgcaccagtggattgatttgatt
tttggctataagcagcaagggccagaagctgtcagatctctaaacgttttctactatctg
acctatgaaggaagtgtcaatctcaattcaataatggatccattgttgagggaggcagtg
gaagctcagatccgaagttttggacagactccttcccaagtacttatagaaccacatcct
ccaagaagttctgctatgcagttgtatctccttctccagagtccgttgatgttcacagac
caagctcaacaggatgtcatcatggtcctaaaatttccatccaactctcctgtaacacat
gtagcagccaatactcagcctggcttggcaaattctgccgtgattactgtcactgtcaac
cgactatttgctgtgaataagtggcacaatcttcctgctcatcaaggtgctgtacaagac
cagccataccagctgccagtggaaatcgatcctctcatagctagcaatacaggtatgcac
aaaaggcaaatcacagatcttctggaccaaagtattcaagtccattcccagtgctttgtt
atcacgtcagataatcgctacatcctggtctgtggattttgggataaaagttttcgggtg
tattctactgatacaggaaaactaatgcaagttgtgtttggacactgggatgttgttacc
tgccttggccgctctgaatcttatattggaggaaactgttatattctatcagggtctcgc
gatgccactctgctgctatggtactggaatggtaaaaccagtagcattggtgataacaca
aatggtgaaactgctgctcctcgggcaatcttgactggacatgattatgagattacctgt
gcagcaatttgtgctgaacttggtgtagtgataagtggttctaaagaaggaccatgtctc
atacattctatgaatggggatctactgaggacattagaagctcctgaaaactgtgtgaaa
gcaaaacttatccaagcatcaagagagggtcactgtgttatatactatgacaatggtcat
ttctgtgtattcagtgtgaatggaaaactccactccactatggaaacagatgataatatc
agggcaatccaactgagccgtgatgggcagtatctcctcacaggaggagacaatggagtt
gttatggtatggcaagtgtatgatctcaagcagctttttgcctatcctggttgtgatgct
ggaatccgatccatgactctttcatatgaccaaaggtgtataatgacaggcatggcttct
ggcagcatagtggttttctacaatgatttcaacaggtggcatcatgaataccaaaccaga
tactga
DBGET
integrated database retrieval system
