Pantherophis guttatus (corn snake): 132708868
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Entry
132708868 CDS
T07329
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132708868
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgut01009
]
132708868
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgut04515
]
132708868
Protein phosphatases and associated proteins [BR:
pgut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132708868
Cell adhesion molecules [BR:
pgut04515
]
Cadherins
Protocadherins
132708868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Collectrin
Syndecan
TMEM154
Mid2
Motif
Other DBs
NCBI-GeneID:
132708868
NCBI-ProteinID:
XP_060542430
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MWVHLEFSLCLAPQGRVAWGQGLSSCFSNSQRLASTKGDVETKEGGRGRLLSASIAPLVM
SSPCDRLPAVWDDRKPCCSPSQSPAVSSEFKMQQLVSCLGVWFFLQLPNLGFGTRVVYKV
QEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPHLRVDGKTGDIYTTETSIDRESLRECQ
HLFPGDPCFLEFEVSITDLMNNSPRLLEGQIEVMDINDNTPNFPSPVITLAIPENTNIGS
LFPIPLAMDRDAGANGVASYELMPGSDAQKLFGLQVAEDQDEKQPQLIVMGNLDREQSES
YDLTIRVQDGGSPPRASSALLRITILDMNDNAPKFEKPLYEAELSENSPIGHSILQVKAN
DSDQGANAEIDYSFHQASDVIHRLLRLDRATGLITVQGPVDREDINVLKFSVLAKDKGAN
PKTARAQVVISVRDMNDNAPSIEIRGIGLVTHQDGIANISEDVPVETPVALVQVSDRDEG
ENAVVTCVVAGDVPFQLRQASDTGSDSKKKYFLQTTTPLDYEAVKEYTIEIVAVDSGNPP
LSSTNSLKVQVMDVNDNDPVFSQSSTEVAFPENNSPNDLVVEVSATDADSGSNAKLVYSL
AGESLSKDTFSIDPESGEIHVKNVLDREQQERYEFLVVATDKGSPSRKGTASIAISVMDR
NDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGDNAVIRLSVEQDNGDFIIQNGTG
TILSSISFDRERQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPVIISPSNASYKH
ILPNTSPGQQVMSVGAEDIDSGINAELLFRIAGGNPFELFKISSVSGNITLEKEILRKHH
GLHRLVVHVNDKGKPSHHGTALVHFYVNETLANRTLLETLVGHSLDTPIDIDIAGDPEYE
RNKQRSNILFGVIAGIVAVTLIILLVVLVRYCRQKEAKSGYQAGKKETKDLYAPKQSSKG
NKAKGKVKKSKSTKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLG
RHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDSNSTGSEQYSDYSYRTNP
QKYTNKQLPHRRVTFSAANQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPE
DHYERTTPDGSIGEMEHPENDLRPLPDVALTGTCTRECTEFGHSDTCWMPGQSSPSRRPK
NALKLSTFVPYQDRGSQEQVGNGSPRLSEERNSKMANLRLLPTYSAFSNSSHEPCKNCPM
EEIPLTQTSDFQTATTPSSQTAKREIYL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgcacctggaattcagtctatgccttgcccctcagggtagggttgcctgggga
caagggctcagttcatgctttagcaatagccagaggttggcatcgacaaagggtgatgta
gagacgaaagaaggaggcagggggcgactcttatcagcttctattgctccgctggtgatg
tcatcaccgtgtgaccgcctcccagctgtatgggacgacaggaagccttgttgcagtcca
tctcagtctccagcagtttcatcagaattcaaaatgcagcagttggtttcttgcttgggt
gtgtggtttttcctccagcttcccaaccttggttttggaacacgtgttgtctacaaagta
caggaagagcagccacccaatacactcattggaagtctggcagcagactatggcttccca
gatgtaggacatctctataaattagaggtgggtgccccccatctgcgtgtggatggtaag
actggtgatatctataccacagaaacttccattgatcgggaaagcctgagagagtgccag
cacttgttcccaggagatccttgttttctggagttcgaagtttctatcacagacctgatg
aacaatagccctcgcctattggaaggacagattgaagttatggacatcaatgacaataca
cccaactttccatctcccgtcatcacattagccattcctgaaaataccaatattggttca
cttttccctattccattggccatggatcgtgatgctggtgccaatggtgttgcttcctat
gaactcatgcctggttcagatgctcagaaactttttggcttgcaagtagcagaggatcaa
gatgagaaacagccacaactaattgtaatgggaaacctagaccgggagcagtcagagtct
tatgacttaactatccgggttcaagatgggggtagcccacctcgtgctagcagcgctttg
ttgcggatcaccattctggacatgaatgacaatgcaccaaagtttgagaaaccattgtat
gaggctgaactttcagaaaatagtcctattggtcactctatactgcaggtgaaagccaat
gattctgatcagggtgccaatgctgagattgattattccttccatcaggcttcagatgta
attcatcggctgctacgcttagacagagccactggactcatcacagtacaaggtcctgtt
gatcgtgaagatattaatgtgctcaagttctcagtgttggctaaggacaagggagctaac
cccaaaactgcccgtgcccaggtagtgatcagtgtcagggatatgaatgataatgctcca
tccattgaaattcgtggtattggtttggtgactcatcaggatggcattgccaatatttca
gaagatgtgccagttgagacacctgtggctctggtacaggtgtctgatcgggatgaaggt
gaaaatgctgttgtaacctgtgtggtggctggtgatgtaccttttcagctgcgacaagcc
agtgatactggcagcgatagcaaaaagaaatactttctacagaccactacaccgttggat
tatgaagcagtgaaagagtataccattgagattgtagctgtggattcaggtaatccaccc
ctatcaagcactaattccctaaaagtgcaggtgatggatgtcaatgacaatgatccagtg
tttagccagagctcaacagaagtggcatttcctgagaataattccccaaatgacttggtg
gtagaagtgagtgctactgatgcagatagtggatctaatgctaaactggtctactcactt
gctggagaatctttatcaaaagacaccttctcaattgatccagaatctggtgaaattcat
gtaaaaaatgtgctggaccgggaacagcaagaacgctatgaattcttagtagttgcaact
gataaaggtagccctagccgcaaaggaactgcctcaattgccatcagtgtcatggatcgc
aatgataacgatccaaaattcatgctcagcggctacaatttttctgtcatggaaaacatg
cccccactgagtccagtgggcatggtgacagttattgatgcagacaaaggagataatgct
gtcattcgactctcagtggaacaggacaatggtgactttatcatccaaaatggtactgga
accattctctccagtatatcttttgatcgtgaacgacagagtacttacactttccggctt
aaagctgtggatgggggagacccacctagatctgcttatgtgggggtgacaatcaatgta
ttagatgagaatgacaatgctcctgtaattatatctccatccaatgcttcctataaacat
attctgcctaacactagtcctgggcaacaggttatgagtgtcggagccgaagacattgat
tctgggatcaatgctgaattactatttagaattgctgggggaaacccctttgaactcttt
aagatttcatctgtaagtggaaatatcacactagaaaaagagattctccgcaagcatcat
ggacttcaccgcttggttgtacatgtaaatgacaaagggaaaccttctcaccatggcaca
gcattagttcatttttatgtgaatgaaacattggctaaccggacactgttggagactcta
gtaggacacagtttggacacacctattgacattgacattgctggtgacccagagtatgag
cgcaacaagcagcgcagtaatattttgtttggagtcattgcaggcatagtggctgtcacc
ttgataattttgcttgttgtgctggtacgctattgccgtcagaaggaggccaaaagtggt
tatcaagctggcaaaaaggaaactaaggatctgtatgctcccaaacaaagtagcaaaggg
aacaaagccaaaggcaaagtgaaaaaaagcaaatccactaagccaccaaaaccaactgaa
gatgaagaagaaacaggtctgcagaaatcacttaaattcaaccttatgaatgattcagta
agtgacagtccccgcatccatctgcctcttaattatccacctggaagccctgacttgggt
cgccattaccgttccaattcacctttgccttccattcaactgcaaccccaatcaccatct
gcctccaagaagcatcaggtagtacaggacctcccagccaccaatacatttgtgggcact
ggggacagcaattctacaggctcggagcagtattcagactacagctaccgtaccaaccct
cagaaatacaccaataaacagttacctcatcgccgagtgacattctctgcagccaatcaa
gctcaagatctgcaggatccctcccagcacagttactatgacagtggccttgaagagtca
gaaacacctagcagcaaatcttcatcagggcctcggatagggcctctggccttacctgag
gaccactatgaacgcaccacacctgatggcagcattggtgagatggaacaccctgagaat
gatctccgacctttgcctgatgtagccttgacagggacctgtactcgagaatgcacagag
tttggtcattctgatacctgctggatgccaggtcagtcctctccaagccggcggcccaag
aatgccctcaaactctccacatttgtgccttatcaagacagagggagtcaagaacaagtt
gggaatggaagccccagactctcagaagagcgcaacagcaaaatggctaatctccgtctg
ctccccacatacagtgccttctccaacagtagccatgagccctgcaagaattgccccatg
gaggaaatccctctcacccagacctcagatttccagacagccaccacaccatcatcccaa
actgccaaacgagagatctacctgtga
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integrated database retrieval system
