Pantherophis guttatus (corn snake): 132710239
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Entry
132710239 CDS
T07329
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132710239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgut03019
]
132710239
Messenger RNA biogenesis [BR:
pgut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132710239
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
132710239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132710239
NCBI-ProteinID:
XP_060541936
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MASVVLSEAEKVYIMHGVQEDLRVDGRSCEDYRCTEVETDVISNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGCLEFFVDCSANATPEFEGRGGEELGIEIANTLYRIFNNESSID
LKTLCINPRQHCWMLYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDEGGHEIE
LSDDPFDCIRLSVYNIPCIVTLSKIGHRHVVDATLQEEACSLASFLISVTSQGVITCMKK
VGRGSLDPESIFEMMETGKRVGKLLHTSLQAILDKEESLGTARKKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtggtcctgagcgaggcggaaaaggtttacatcatgcatggtgtccaggaa
gatcttcgagttgatggccgtagctgtgaagattatagatgtacagaagtggaaacagat
gtgatatctaatacaagtggatctgctagagtaaaacttgggcacacagacatcctggtt
ggagtcaaggcagaaatgggaacaccaaagctggagaaaccaaatgaaggctgcttggaa
ttctttgttgattgttcagcaaatgccactccagaatttgaaggacgtggtggtgaagaa
cttggcattgagatcgcaaataccctctataggatatttaataatgagagcagtatcgac
ttgaaaaccctttgtattaatcccagacagcattgctggatgctttatgttgatgtcttg
ttattggagtgtggtggtaacttgttcgatgccatctcaattgcagtgaaggcagcactc
tttaataccaggatccccaaagtacgtgttctggaggatgaaggaggacatgaaattgaa
ctgtctgatgatccttttgactgtattcgactcagtgtttataatattccttgtattgtt
accttaagcaaaattggccatagacatgtggtcgacgccactcttcaggaagaagcatgt
tccttggctagctttcttatttctgtaacaagtcagggtgttatcacttgcatgaaaaaa
gtgggaagagggagccttgacccagagagcatttttgagatgatggagactggaaagaga
gtaggcaaattgctgcacacctccttgcaagctattttagataaagaagagagtctcgga
acagcacgaaaaaaagttggatttttgggatga
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