Pantherophis guttatus (corn snake): 132710978
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Entry
132710978 CDS
T07329
Symbol
TRIM47
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47
KO
K12023
tripartite motif-containing protein 47
Organism
pgut
Pantherophis guttatus (corn snake)
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgut04121
]
132710978 (TRIM47)
Ubiquitin system [BR:
pgut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132710978 (TRIM47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
SPRY
zf-C3HC4_3
zf-RING_5
zf-RING_2
ANCHR-like_BBOX
COG6_N
NagJ_C
zf-Tbcl_FmdE
DUF7217
V-SNARE
ALS2CR8
Anthrax-tox_M
Motif
Other DBs
NCBI-GeneID:
132710978
NCBI-ProteinID:
XP_060544657
UniProt:
A0A6P9B4L8
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MDAGSGPISSALNFQEGPFGCPICLDALKDPVTTPCGHNFCLECIGAHRHHPGGVTGTGG
QSASRCPLCQEPFPADLPLRKNHTLAELLQLRQPAPSSPGLAMAPEETSEPCAPENGDAH
IEEVLCDFCTGGERAEAAKSCLVCLASFCAPHLQPHLKSPAFQNHRLVPPLRHIEESLCK
LHLKPLESFCRTDRSCICQLCLTQEHRSHEVVAVEVEREHVEAQRPKILNNIENQLDELG
ATIAQMKRIVDLIKATAQKEKEKVSSLLTEATKVLATFKKEVLGFIEVDERAMLGGAEEE
LRHKENRHALLMEHKRNLEKVPSTDTITFLQEFQALKIAAEEKNLACSNFPRELSFIKSS
QAVFAVKELLGNICKNQWDQLSGKGENGPFLHGIPEVTIEPQVSERSINPASLESRDYFL
KSAFIIDLDSDTADKFIQLFGTKGAKRVLNPIAYPETSTRFINCEQVLGENLMNRGNYYW
EVEIIDGWVSIGVITEDFNPQESYDRGRLGRNEKSCCLQWNGQNYVAWFGGFDCVIQQPF
FHTIGVYLEYSEKVLTFYGVKDSKMTCLQQFKVARFKKGHFDPFQNKINHQFPALFTHNL
KPAFFLESVDAHMQLGPLKKDCVSVLKRR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggctctggccccattagctccgctctcaactttcaagaaggtcctttcggt
tgccccatttgcctagacgctctgaaggacccggtcaccactccttgcggccacaatttc
tgcttggagtgcatcggggcgcacaggcatcaccccgggggcgttacaggaaccggagga
caaagtgcctcccgctgccccctctgccaggaacccttcccagccgacctcccgctccgt
aagaaccacaccctggcagaattgttgcagctccgacagcccgcgccgagcagtccgggc
ctggctatggcacccgaggaaacgtcggagccgtgcgctccagagaacggcgatgcccac
atcgaggaggtgctgtgcgacttctgcaccggcggggagagagctgaagcggcaaaatcg
tgcttggtgtgcttggcgtccttctgcgccccccacttgcagcctcatctgaaaagtccg
gctttccaaaaccaccggctggttccgcccttgcggcacatcgaggagagcctctgtaaa
ttgcacctcaagcccttggagagcttttgccggaccgaccgcagctgcatctgccagctc
tgcctgacccaggagcatcggagccacgaagtggtggcagtggaggtggagcgggaacac
gtggaggctcagaggcccaaaatcctgaacaatattgaaaatcagctggatgaactggga
gccacaatagcacaaatgaagaggatagtggacctcatcaaagctactgctcagaaggag
aaggaaaaggtcagcagtctccttaccgaggccaccaaggtcctggcaacctttaagaag
gaagtgcttggtttcattgaggttgatgaaagagccatgctaggcggagcggaggaggaa
ctgcggcataaagaaaatcgacatgccctgctgatggaacacaagcggaacctggagaaa
gtccccagtacagacaccatcacttttctccaggaattccaggcattaaaaatagcagct
gaggaaaaaaaccttgcatgttcaaacttccccagagagctgagttttattaaatcgagt
caggccgtgtttgctgtgaaggagctgctgggaaatatttgcaagaaccaatgggaccaa
ctgtcagggaagggtgagaatggaccttttcttcatgggataccagaagtgacaattgaa
ccgcaggtttcagaaaggagcatcaaccctgccagtttggaatcacgagattattttctc
aaatctgcattcatcattgatttggacagtgatactgctgacaagttcatccaactcttt
gggaccaagggggctaagcgtgtgctgaatcccattgcttaccctgagacctcaaccagg
tttatcaactgtgagcaagtattgggtgagaatcttatgaaccgtggcaactattactgg
gaagtggagatcatagatggttgggtgagcattggggtcatcactgaagatttcaatccc
caggaatcatatgaccggggccgcttaggcaggaatgagaagtcatgctgtctacaatgg
aacggccagaactatgttgcgtggtttggcggatttgactgtgttatacagcagccattt
tttcatactattggggtgtacttggagtattcagagaaggtgctgacattctatggagtc
aaggattccaagatgacttgtctccagcagttcaaagtggctcgcttcaaaaaggggcat
tttgaccctttccagaataagatcaaccaccagtttccagcactgttcacacataacctc
aagccagccttttttctcgaaagcgtagatgctcacatgcagctcgggcctttgaagaaa
gactgtgtttcagtacttaagcggcgataa
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