Pterocles gutturalis (yellow-throated sandgrouse): 104458121
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Entry
104458121 CDS
T08540
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pguu03041
]
104458121 (DDX1)
03016 Transfer RNA biogenesis [BR:
pguu03016
]
104458121 (DDX1)
Enzymes [BR:
pguu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104458121 (DDX1)
Spliceosome [BR:
pguu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104458121 (DDX1)
Transfer RNA biogenesis [BR:
pguu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104458121 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104458121
NCBI-ProteinID:
XP_010082517
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGSVVKSQHSGSAQVGQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTITQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgcctgagatagctcaagcagtggaggagatggactggcttcttcctacg
gatatccaagcagaatccattccactgatcctgggaggtggtgatgtacttatggctgct
gaaactgggagtggaaaaactggtgcttttagcattccagttatccagattgtttatgaa
acgctgaaggaccagatggaaggcaagaaaggaaaagcaactattaagactggtggggca
gtgctcaataaatggcaaatgaacccgtatgatagaggatcagcttttgcaattggatca
gatggtttgtgctgtcaaagcagagaagtaaaagaatggcacggatgcagagcaactaga
ggcgtgactaaagggaaatactactatgaagtttcctgtcatgaccaaggcttgtgcaga
gttggttggtcaactatgcaggcttcacttgatttaggcactgataaatttggttttggt
tttggtggcactggtaagaaatctcacaacaagcaatttgacagctatggtgaggaattc
actatgcatgatacaattgggtgttatctagatatagataaaggacaaataaaattttcc
aaaaatgggaaggaccttggccttgcatttgaaatcccaccacacataaggaaccaagca
ctttttgcagcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagaagat
ttcaagtttccaccaaaagatggctatattggtctttgcaaggctcctgatggtagtgtt
gtaaaatcacaacactcaggaagtgcacaagtgggtcagacacagaaccttccaaatgct
ccaaaagcattgattgtagaaccatcaagagagttggcagaacaaactttgaacaacgtg
aagcagttcaaaaaatatgttgataatcccaaattaagggaactgttgattattggtggg
gttgctgcaagagatcaactctctatattggaacaaggagtggatattgtcgttggaact
cctggaagactggatgacctggtctcaacaggaaagcttaatttatctcaagttagattc
ctggttctggatgaagctgatggccttcttctccaaggttattctgatttcataaacagg
atccacagtcaaattcctcagataacttcagacggaaagagacttcaggtgattgtgtgc
tctgcaacgctacattcttttgatgtgaaaaagctatctgaaaagatcatgcattttccc
acctgggttgatttgaaaggagaagattctgtccctgaaactgtacaccacgtagttgta
cttgtaaatccaaaagccgacaaactctgggagaggcttggcaagaatcatatcagaact
gatgaagtacatgcaaaagacaatacacgacctggtgctaacactccagaaatgtggtct
gaagctattaaaattctaaaaggagaatacacagttcgggcaatcaaagaacacaagatg
gaccaagccattattttctgcagaactaaaatagattgtgataatatggagcagtacttt
atccaacagggcggaggccctgataggaagggacatcagttctcatgtgtctgtctgcat
ggtgacagaaaacctcaagaaagaaagcaaaacctggaaagatttaagagaggggatgtc
cgtttcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccatat
gttatcaacgtcacactccctgatgaaaagcagaactatgttcaccgaattgggagagta
ggcagagctgagaggatgggtttggcaatctcccttgtggcaaaagagaaggaaaaggtt
tggtatcatgtatgcagtagtcgtggaaaaggctgttacaatactagactgaaggaagaa
ggaggttgtaccatatggtacaatgagatgcagttgctgggagagattgaagaacactta
aactgcactattacccaagttgaaccagacataaaagtaccagtagatgattttgatggg
aaagttacatatggacagaaaagagccctgggtggtggactgtataaaggccacgtggat
attctggcacctacagtacaagagttggctgcccttgaaaaggaggctcagacatctttc
ttgcatcttggctatcttcctaaccagctgttcagaacattctaa
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