Pterocles gutturalis (yellow-throated sandgrouse): 104458503
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Entry
104458503 CDS
T08540
Symbol
SETX
Name
(RefSeq) probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pguu03021
]
104458503 (SETX)
Enzymes [BR:
pguu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104458503 (SETX)
5.6.2.5 RNA 5'-3' helicase
104458503 (SETX)
Transcription machinery [BR:
pguu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104458503 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
SAS4
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104458503
NCBI-ProteinID:
XP_010078865
LinkDB
All DBs
Position
Unknown
AA seq
2824 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKRLSPEDLEGANDDLCYCLECVVEYHKAREELPRWHE
VLWELETSRLVAHIEKSIQEEAGEDDELFIVDENGETQLSGYVGPDFENNLRVPLLEILK
YPYLLLHERVSELCVEVLCRMEQSHSSFQVFEKYPGIYLFLVHPNEVIHRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFETPEIYSSAVVEKGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQALDSLLLGPDKQNDFMQSILHTMEKEAADDSTDPFWPALRCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSASYNNEIKNIRSSFKRTKSEPESDYGDDMVTCSQIVYG
YNPERPQKDSGWKTAICPEYCPNMYEDMQTLANVLQSDIGRDMRVHDSMFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKDILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTRRTEKASGHCLRGSATVSLQASNSVQHACVQLIRSLL
KEGYQIGQHALCKKYLDKLNLLLRGNMSLGWQLNIQETQELQVSLKQVIKSMRDRALNTS
VPVGNNANSTTSPPVSIKQEKSAYGDECKMNVHSRDYLWSPFAATLKEGGDGHCQENPCP
EGKSTWEEECRDASKSSRSGTSTKGLLMNIKKELNDSTTQEYVYPQNSSVTKVCGKVQEN
RNNDLVAGKCDTDNQRFNPNAQHSDFRRGGELENKCEVGPITPMHLAAQTRTGSPENIYS
SGVQESNMSPSSSSKFKVDVHRLTNLKNKLKETEWPLKESQPVKLHDLKNCSLATSASKA
EAEQPKFCTGYLCTSKDCHKHQGLNTVCKNEVSVGIPSSRSCESAQEESVNSAFQSRLVP
TKQISKETPLGCFSSSKTDHSMQENEDDSILLSGVSDTLLKKVSMEEKSSSLFKSVFKRD
SDMQTSDQEQLNLNDLVKYDCKGRISKTFYMDKTSANGCVPSSSENKRDISHPASRIRPL
SMKCESSDRLFEFSEYFKRENNSVGKKEEDLVKMVSEGNTLTDSQVDRDLSKLSLAAYAK
SVNFSLDSSQESSVHHNICDIKRKVKGAVRSSSDGQSTKSHCDKDCLENQVIIISDSSDE
EKFVADEEETKKMNENVCPEKQPSTSSCISDSDTKIESKAPSSPLSLEDCESQYFEFETE
VDVFSVWQDTQAYAMEATQEYKQANVSTSVDSSNSDGLLNDHTNEWGYDEYYITDAAMEE
ATNLVEEQIENISHQKEGDNTKEVTNSTLQESISTGTAKGQLENVADKGTVAKDFTLGSK
LTEPRASTSQMSLASKLALKKNSASSRKNIAKSKVTRTIQRSPKKPFVLKTSQNKKLFQS
TSKTSQPCRSTPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLDSLAQLRSYG
KAAGRVAVAQKQKTKLIAPQNLSVKHNKKLLACQDLQFLRQTRPKKNVRVKNPAGSSESR
SKKVSKVDAKSMKQKPKSFERASVEGSLENQRGEKREEAVCPSASERKFESLSVEEETRV
SKRPSSSDLSRKSEDSGGRVPPVPTGSSLSPAVLVGDDKDEPSGKGCVVQPACEKTTSKE
NECKPTGNSEDDDDDLFLTQLDPVDMELCSEEESVQDTTRASKKTEEMHTAENLQQNESL
TSVKCKDKDCMEKVEKTGEYCSKHSATSSETDHLFAKPLLTPSKARKPSTTKIFSTASSS
RNAAFSKDLEDVKKLPPASKSKVNAAKPAVVRPPSAKAVPTGNPTCKLPSFSNVPQPRSS
NNVLQPQNRQNYNASDISRRPAQEPYSSSFLGAQQRDYSIFVNEVLKWTYEMFAKSSQFG
SPNNLLQSVIASVPVQFQGYNDYFNTFFPLMMLNAFETLADEWLENQRGKEKSYYFYLQN
FCADLNRADFTAHFQESDLARQLHPKEDDLIFLVVQKKKDTFREESEMKDHIMSHVGLVT
RFSRASGCLTRQKEKHTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTRRMFRGLLLLSR
SPLAKPIINPSYNDFCPRDLPLASESAALDRSEYNEGQKRAIETAYAMVKQHPGLPKICL
IHGPPGTGKSKTIVGLLSHILRENTRNEKGTQKTNSKIKPNRFLVCAPSNAAVDELMKKI
IIAFKEKCQNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDI
QKKKEALDQQLDMLSRQRALHRCEKRESQMLDDEIGRLSKERQQLASQLKEVRGHSQKVQ
VDIILESDIICCTLSTSGGNLLESAFSRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCNK
LVLVGDPRQLPPTVKSVKAREYGYDQSLMARLHRHLEEQVRNNVLRSLPVVQLTVQYRMH
PDICLFPSNYVYGRTLRTDRATEENRCSSEWPFQPYLIFDVGDGHEERDNDSFSNPQEVK
LVMELIRTIKEKRKDLGLRRIGIITPYSAQKRKIQEQLDRVFKNNSPGEVDTVDAFQGRE
KDCIIVTCVRANSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDA
QKRGAIIQTSEKSYRKDAVKILKLNPTVQPPTKAETKKPPPLQAYSSSSKRSELATPREA
GSPRELAASAGHTAPQGSRGPQQPPGAQAADSRRGSASAPTEAAALPAGQVKPRDPRLAS
MASRTETKGKEQASKDSNQSGSTLQQGINVSSAAREQISRTETSKKPQQTVGQCDVPSTS
SDAAWHEGDRKAAVLKSSSKAPSGGGQSNSSKWDKDCHVLTRRTSEESAEKTESNSAKRR
KTFH
NT seq
8475 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgacaccactgagttcctgaagagc
tatgcttctaaacggttgtccccagaagatcttgaaggagccaacgatgatctctgttac
tgcctggagtgtgtggttgaataccacaaagcacgggaagaattaccaaggtggcatgag
gtcttgtgggagttggaaacctcccgtcttgttgcccacattgagaaatccatccaagaa
gaagctggagaagacgatgagttgtttatagtggatgagaatggagagacacagctgtct
ggttatgtgggcccagattttgagaataacctgcgagtgccccttctagaaatactgaaa
tacccgtatctgctgctgcatgagagagtcagtgagctgtgtgtagaagtgctctgtaga
atggaacaaagtcacagctcctttcaagtctttgagaaatatccaggaatttatctcttt
ttggtacacccaaatgaagtgattcatcgatgggccatcctaacagcaaggaatttaggg
aaggttgacagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt
attgagttggggctttttgagactccagaaatttacagctctgcagtggttgaaaagggt
aaactcatccttctgccatctcatttatacgatactgccaactacaagaactattggctg
gggatttgtatgcttctaacagtgctggaagaacaagctctggattccctgttactgggt
ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggagaaagaagcagct
gatgattctaccgaccccttctggccagcgctgcgttgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatt
aacagtgcaagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaaccggagtcagactatggtgatgacatggttacttgcagtcagattgtttacggt
tataacccagaaaggcctcaaaaggattctggatggaagaccgccatttgtccagaatac
tgccccaacatgtatgaagatatgcagacactggccaatgtgcttcagtctgatattggc
agagatatgcgtgtccatgacagcatgtttctgtggttcatcccttttgtacagtcgctt
atggatctcaaggacttgggtgtagcgtatatagtagaggtcattcactacctctgctcg
gaaatcaaagatattcttaatgaaagaatccagcagtgtgacaaaatctcggaatttttt
ctcctgatcttggtgtccattattgaactacacagaaataaaaagtgcctgcatttgcta
tggattagctcccaagaatgggtggaagcagtggtgagatgtgctaagcttccagctata
gcatttacacggcgcactgaaaaagcatctggacactgtttgagaggttcagcaacagta
tctttacaagcttctaactctgtgcagcacgcctgtgtgcagctgatccgcagccttctt
aaagaaggctatcaaattgggcagcacgctctttgcaagaaataccttgacaaactcaat
cttcttctgcgaggaaatatgtctttaggttggcagctgaacatccaggaaacccaggaa
ttacaagtgagtttaaagcaagttataaaaagtatgagggacagagcattgaatacctct
gtgcctgtaggaaacaatgcaaattctacaacttcacctcctgtttctataaagcaagag
aagagtgcatacggtgatgagtgcaagatgaatgtgcatagcagagattacctttggtca
ccatttgctgccacattgaaggaaggcggagatggacattgtcaggagaacccttgccct
gaaggaaagagtacctgggaagaggaatgtagagatgcatctaaaagttcaagatctggg
acatccacaaaaggactcttgatgaatattaaaaaggaacttaatgactcaacaactcag
gaatatgtctacccacagaactcttcggtgacaaaagtatgtgggaaggttcaggaaaat
aggaacaatgatcttgtggcagggaaatgcgatacagataatcaacgttttaatccaaat
gcccagcattcagatttcagaagaggcggagagttggaaaacaaatgtgaagtaggtccc
ataacaccaatgcatctggctgctcaaactcgtactggttctccagaaaacatttacagc
tcaggtgtgcaggaaagtaatatgtctcccagttcctcttcaaagtttaaagtagatgtg
catagactcacaaatttgaaaaacaagttaaaggaaactgaatggcccttaaaagaatca
caaccagtgaagctacatgacttgaaaaactgcagtttagcaacgagtgcttcaaaagcg
gaggcagaacaacctaagttttgcactggctatctgtgtacaagcaaagattgtcataaa
catcagggattgaatactgtgtgtaaaaatgaagtctctgttggtattccatcttcaagg
agttgtgaaagtgcccaggaggaaagtgtcaacagtgcttttcagtccagactggtcccc
actaaacagatatcaaaagaaacgccactgggttgctttagttcctctaaaactgaccac
agtatgcaggaaaatgaagatgacagtattttgctttcaggggttagtgacaccttactg
aaaaaagtatccatggaagaaaaatcgagttcattgtttaagtctgtgtttaagagagac
agtgacatgcaaacttcagaccaggaacagcttaatttaaatgacttggttaaatatgac
tgtaaaggtcgaatttcaaagacgttttatatggataaaacttcagcaaatggctgtgtt
ccatctagctctgaaaacaagagggatatatcccaccctgcttctcggatcaggccactg
tcaatgaagtgtgaatcaagcgacaggttgtttgaattttcagaatatttcaagagagaa
aacaattcagtagggaagaaagaggaggatttggtgaagatggtttctgaaggtaatact
ttaacagactcccaggttgatagagatctcagtaagttatctttagctgcatatgccaaa
agtgtcaatttttcccttgattcaagccaagaaagctcagtacatcataatatatgtgat
attaaaaggaaagtgaaaggtgcagtaagatcttccagtgatggccaaagtactaagtct
cactgtgataaagattgccttgaaaatcaagtcattataatttcagactcttctgatgaa
gaaaaatttgtggctgacgaggaagaaacaaaaaaaatgaatgaaaatgtgtgtcctgaa
aagcagccttcaacttccagctgtatttctgatagtgataccaaaatagaatcaaaggca
ccaagctctcccttatcactggaagactgtgagtctcagtactttgagtttgaaacagaa
gttgatgtcttttccgtttggcaagatactcaagcgtatgctatggaagcaactcaagag
tataagcaagctaatgtttcaacatcggttgatagcagtaattcagatggtttactgaac
gatcacacaaatgaatggggttatgatgagtattacataactgatgctgccatggaagaa
gcaacaaacttggtagaagagcaaatagaaaatatttctcatcagaaagaaggtgataat
acaaaagaagtaactaattcaacattgcaggaatcaattagtacgggaactgcgaaaggt
caactggagaatgttgcagacaaaggtactgttgctaaagacttcaccctgggctcaaaa
ttgactgaacccagagcatctacatctcaaatgtcattagcttcaaagttggcccttaag
aaaaacagcgcaagctcacggaagaatatagcaaaatctaaggtaacaagaactattcag
agaagtcctaaaaaaccttttgttcttaaaacatcacaaaataaaaaactgtttcaaagt
acatcaaaaacttctcaaccttgcaggtcaacacctgctgtggttcctccaaggaaagtt
cgtcagtgtcctgcaccagcatcaactgtagaaaagctcggtctgaagaaggcaccccgc
aaagcgtttgagttatcccagcgctccttagatagcctagctcagttgcgcagctacggt
aaagctgcagggagagttgcagttgcacagaaacagaagacaaaactaattgctcctcag
aatttgtctgtaaaacataataaaaaattgctagcctgccaagaccttcagtttttaagg
cagacaaggcccaaaaaaaatgtcagggtgaaaaatcctgcaggaagttctgagagtaga
agcaagaaagttagcaaagtggatgcaaaatctatgaaacaaaagcctaaaagttttgaa
cgggcatctgttgaaggatctcttgaaaaccaaagaggggaaaaaagggaggaggctgtt
tgtccttctgccagtgagagaaagtttgaaagcctctctgtggaggaggagacacgtgtc
tctaaaaggcctagttcttcagacttgagcagaaaatcggaggatagcggtgggagggtt
cctcctgtacctacaggttcaagtctctctcctgctgtgcttgttggagatgataaagat
gaaccttcaggaaaaggttgcgttgttcagcctgcgtgtgagaagacaacttcaaaagaa
aatgagtgtaaaccaactggaaacagtgaagatgatgatgatgatctgtttttaactcag
ttagatcctgtggatatggaattatgttccgaggaggaaagtgttcaggatactactaga
gctagtaaaaaaacagaggaaatgcatactgctgaaaaccttcagcagaatgaatccttg
actagtgtgaaatgtaaggacaaagactgtatggaaaaagtggaaaaaacgggagagtac
tgtagtaagcattcagccaccagctcagaaacagatcacttgtttgccaaacctctcctg
acaccttctaaagcaagaaaaccttccactaccaaaattttcagcaccgcaagttcttca
cggaatgcagccttcagcaaggatctcgaagatgttaaaaagctaccgccagcttcaaaa
agcaaagtgaatgcagcaaaaccagcggtggtcaggccaccaagtgcaaaggctgtacca
acaggaaatccaacgtgcaagttgccgagtttcagtaatgtacctcaaccccgtagttct
aataacgttctccagccacaaaataggcaaaattacaatgcttcagatatttccagaagg
cctgcccaagaaccatacagttcttcctttcttggtgctcagcagcgtgattatagcatt
tttgttaatgaagtcctgaagtggacttacgaaatgtttgcaaagtccagccagtttgga
tctccgaataatctcctgcagtctgtaatagcctctgttcctgtccaatttcagggatac
aatgactattttaatacgtttttccccttgatgatgctaaatgcctttgaaacactggca
gatgaatggttagaaaaccagagaggaaaagagaagagttactacttctacttacagaac
ttctgtgctgacttgaatagagcagattttacagctcattttcaagaaagtgatttggca
aggcagcttcacccaaaggaggatgacttaatctttttggtggtccaaaagaaaaaagac
acctttagggaagaaagtgagatgaaggaccatatcatgagtcacgttggtcttgtgaca
cgattttctcgtgcgtctggctgtttaactagacaaaaggagaagcataccgtctgtcat
ctttctgtgcaaactcggggcaatttgtcattcttcataaataagcaagtgaagtgtgtg
gtggttggctccctggtgaccacacgccgcatgttcagaggtctgctactattgagcagg
agtcccctggctaaacccatcataaacccaagttacaatgacttctgtcccagagatttg
cctctagcttcagaaagtgccgcattggataggagtgaatacaatgaaggtcaaaagaga
gccattgagacagcttatgccatggtaaagcaacatccggggcttcccaagatctgcctc
atccatggaccacctggaacagggaaatcaaaaactattgttggacttctgtctcatatt
ttgagagaaaacacgaggaatgagaaaggaactcaaaaaacaaattccaagataaagccc
aaccgtttcctagtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaagatc
atcattgcatttaaggaaaaatgccaaaacagacaggagcctctgggaaattgtggggat
atcaaattagtgcgacttggtgctgaaaaagcaatcaacagcgaagtccggggatttagc
ctggataagcaagttgaacatagaatgaaacgaaagccagctgactgtgaccaggatatt
cagaagaaaaaagaagctctggatcaacagttggacatgctgtctcgtcagcgtgccctg
cacagatgtgagaagagggagagtcaaatgttggatgatgaaattggcagactttcaaag
gagagacaacagcttgcttctcagctaaaggaggttcggggccattctcagaaggtacag
gtggatattatcttggagtccgatatcatctgctgcacgctgagcacaagtggaggaaat
ctgctggaatctgctttttcgaggcaaggacttgatcctttcagctgtgtcattgtggat
gaggcagggcagtcctgtgaggtcgaaacactgattccactgattcatcgctgcaataaa
cttgtccttgttggagatcccagacagctacctcctactgtaaaatcagtaaaagctcgg
gaatatggctacgaccagtccttgatggcacgcctgcacagacacctggaggagcaagtg
cggaataatgttttacgcagcctgccagttgtgcagctgactgtgcaatacaggatgcac
cctgacatctgcctcttcccatccaattatgtttatggcaggactctaaggactgacaga
gcaacagaagagaacagatgttcttcagagtggccattccagccctaccttatttttgat
gtaggagatggtcatgaggagcgagacaatgactcttttagtaatcctcaggaagtgaag
ctggtgatggaactaattagaacaattaaagaaaaaaggaaagatctcggtcttcgtcgc
attggaataattaccccttacagcgcacagaagaggaaaattcaagaacaactggacaga
gtgtttaagaataacagcccaggagaagtggacacagtggatgcattccagggacgagag
aaagactgcatcatagtgacgtgcgtccgggcaaacagcactaaagggtcaatagggttt
ctggcaagccttcagcgtctgaacgttacaattacccgagccaggttcagcctcttcatc
cttgggagactgaagacgctcatggaaaataaagactggaacgagttgattcaggatgct
cagaaaagaggtgccattatccagacatcagaaaaaagctacaggaaagatgctgttaag
attttgaagctcaatccaacagtacagcccccaaccaaagcagagacaaagaaacctcct
ccgttgcaggcttattcttccagtagcaagaggagtgagcttgcgactccaagggaggcc
ggcagcccgcgggaactcgctgctagtgctggccacacagcgccccaaggaagcagaggg
ccccagcagcccccgggggctcaggctgcagactccaggagaggcagtgcctctgcacct
acggaggctgcagcccttcctgctggtcaagtgaaaccgcgggacccgcggctggcaagt
atggctagtagaactgaaacaaaagggaaggagcaggcctcaaaagacagcaatcagtca
ggatcaacgttgcagcaaggcatcaatgtgtcctcagctgccagggagcagatttccaga
acagaaacttctaagaagccccagcaaacagtgggacagtgtgacgtgccttccacgtca
tctgatgcagcttggcacgagggtgaccggaaagcagctgtattgaaaagcagttcaaaa
gcccccagtggaggaggtcaaagtaatagcagtaagtgggacaaagactgtcatgtttta
acgaggagaacatcagaggaatcagcagagaagacagaatcgaacagtgccaagcgaaga
aagacctttcactga
DBGET
integrated database retrieval system
